RNA–Protein interactions for RNA: ENST00000575272.1

STRA6-221, Transcript of stimulated by retinoic acid 6, humanhuman

TSL 4

Gene STRA6, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRA6-221ENST00000575272 TRIM27P14373 513 aa13.03□□□□□ -0.32
STRA6-221ENST00000575272 GTF2E1P29083 439 aaPredicted RBP13.03□□□□□ -0.32
STRA6-221ENST00000575272 PARP10Q53GL7 1025 aa13.03□□□□□ -0.32
STRA6-221ENST00000575272 NBPF5PQ86XG9 351 aaPredicted RBP13.03□□□□□ -0.32
STRA6-221ENST00000575272 PPP1R42Q7Z4L9 355 aa13.02□□□□□ -0.33
STRA6-221ENST00000575272 ZNF34Q8IZ26 560 aa13.02□□□□□ -0.33
STRA6-221ENST00000575272 CNBD1Q8NA66 436 aa13.02□□□□□ -0.33
STRA6-221ENST00000575272 LINS1Q8NG48 757 aa13.02□□□□□ -0.33
STRA6-221ENST00000575272 SRCIN1Q9C0H9 1055 aa13.02□□□□□ -0.33
STRA6-221ENST00000575272 NYXQ9GZU5 481 aa13.02□□□□□ -0.33
STRA6-221ENST00000575272 CWC25Q9NXE8 425 aaPredicted RBP13.02□□□□□ -0.33
STRA6-221ENST00000575272 UBN2Q6ZU65 1347 aa13.02□□□□□ -0.33
STRA6-221ENST00000575272 AFDNP55196 1824 aaKnown RBP13.02□□□□□ -0.33
STRA6-221ENST00000575272 PLIN1O60240 522 aa13.01□□□□□ -0.33
STRA6-221ENST00000575272 CCT4P50991 539 aaKnown RBP13.01□□□□□ -0.33
STRA6-221ENST00000575272 RRP1P56182 461 aaKnown RBP13.01□□□□□ -0.33
STRA6-221ENST00000575272 DDR1Q08345 913 aa13.01□□□□□ -0.33
STRA6-221ENST00000575272 CWF19L2Q2TBE0 894 aaKnown RBP13.01□□□□□ -0.33
STRA6-221ENST00000575272 NLRP10Q86W26 655 aa13.01□□□□□ -0.33
STRA6-221ENST00000575272 DZIP1LQ8IYY4 767 aaKnown RBP13.01□□□□□ -0.33
STRA6-221ENST00000575272 CCDC191Q8NCU4 936 aa13.01□□□□□ -0.33
STRA6-221ENST00000575272 ISCA1Q9BUE6 129 aa13.01□□□□□ -0.33
STRA6-221ENST00000575272 UTP14AQ9BVJ6 771 aaKnown RBP13.01□□□□□ -0.33
STRA6-221ENST00000575272 TRMT112Q9UI30 125 aaKnown RBP13.01□□□□□ -0.33
STRA6-221ENST00000575272 ABCC4O15439 1325 aa13.01□□□□□ -0.33
STRA6-221ENST00000575272 COL24A1Q17RW2 1714 aa13□□□□□ -0.33
STRA6-221ENST00000575272 NEURL1BA8MQ27 555 aa13□□□□□ -0.33
STRA6-221ENST00000575272 POLRMTO00411 1230 aaKnown RBP13□□□□□ -0.33
STRA6-221ENST00000575272 ALDH1L1O75891 902 aa13□□□□□ -0.33
STRA6-221ENST00000575272 SERPINB2P05120 415 aa13□□□□□ -0.33
STRA6-221ENST00000575272 TM4SF1P30408 202 aa13□□□□□ -0.33
STRA6-221ENST00000575272 ST5P78524 1137 aa13□□□□□ -0.33
STRA6-221ENST00000575272 BEND3Q5T5X7 828 aa13□□□□□ -0.33
STRA6-221ENST00000575272 TPTE2Q6XPS3 522 aa13□□□□□ -0.33
STRA6-221ENST00000575272 KLHL34Q8N239 644 aa13□□□□□ -0.33
STRA6-221ENST00000575272 PPP1R1BQ9UD71 204 aaPredicted RBP13□□□□□ -0.33
STRA6-221ENST00000575272 TNNQ9UQP3 1299 aa13□□□□□ -0.33
STRA6-221ENST00000575272 IBTKQ9P2D0 1353 aaPredicted RBP12.99□□□□□ -0.33
STRA6-221ENST00000575272 IGKV5-2P06315 115 aa12.99□□□□□ -0.33
STRA6-221ENST00000575272 TRIM28Q13263 835 aaKnown RBP12.99□□□□□ -0.33
STRA6-221ENST00000575272 RTL5Q5HYW3 569 aaPredicted RBP12.99□□□□□ -0.33
STRA6-221ENST00000575272 SUSD4Q5VX71 490 aa12.99□□□□□ -0.33
STRA6-221ENST00000575272 ITPRIPQ8IWB1 547 aa12.99□□□□□ -0.33
STRA6-221ENST00000575272 C9orf78Q9NZ63 289 aaPredicted RBP12.99□□□□□ -0.33
STRA6-221ENST00000575272 SUPT16HQ9Y5B9 1047 aaKnown RBP12.99□□□□□ -0.33
STRA6-221ENST00000575272 RNF123Q5XPI4 1314 aa12.98□□□□□ -0.33
STRA6-221ENST00000575272 SH3TC1Q8TE82 1336 aa12.98□□□□□ -0.33
STRA6-221ENST00000575272 GCKRQ14397 625 aa12.98□□□□□ -0.33
STRA6-221ENST00000575272 NUTM1Q86Y26 1132 aa12.98□□□□□ -0.33
STRA6-221ENST00000575272 TMEM57Q8N5G2 664 aa12.98□□□□□ -0.33
STRA6-221ENST00000575272 PANK1Q8TE04 598 aa12.98□□□□□ -0.33
STRA6-221ENST00000575272 N4BP2Q86UW6 1770 aaPredicted RBP12.98□□□□□ -0.33
STRA6-221ENST00000575272 NTSR2O95665 410 aa12.97□□□□□ -0.33
STRA6-221ENST00000575272 RLBP1P12271 317 aa12.97□□□□□ -0.33
STRA6-221ENST00000575272 HSP90B1P14625 803 aaKnown RBP12.97□□□□□ -0.33
STRA6-221ENST00000575272 PTGER2P43116 358 aa12.97□□□□□ -0.33
STRA6-221ENST00000575272 INTS3Q68E01 1043 aaKnown RBP12.97□□□□□ -0.33
STRA6-221ENST00000575272 PRR5LQ6MZQ0 368 aa12.97□□□□□ -0.33
STRA6-221ENST00000575272 UBE3BQ7Z3V4 1068 aa12.97□□□□□ -0.33
STRA6-221ENST00000575272 CCDC24Q8N4L8 307 aa12.97□□□□□ -0.33
STRA6-221ENST00000575272 ZBTB38Q8NAP3 1195 aaPredicted RBP12.97□□□□□ -0.33
STRA6-221ENST00000575272 GRM8O00222 908 aa12.96□□□□□ -0.33
STRA6-221ENST00000575272 PCCAP05165 728 aaPredicted RBP12.96□□□□□ -0.33
STRA6-221ENST00000575272 PDE3AQ14432 1141 aa12.96□□□□□ -0.33
STRA6-221ENST00000575272 ERFEQ4G0M1 354 aa12.96□□□□□ -0.33
STRA6-221ENST00000575272 JARID2Q92833 1246 aaPredicted RBP12.96□□□□□ -0.33
STRA6-221ENST00000575272 FAM89AQ96GI7 184 aa12.96□□□□□ -0.33
STRA6-221ENST00000575272 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.33
STRA6-221ENST00000575272 ABCC12Q96J65 1359 aa12.95□□□□□ -0.34
STRA6-221ENST00000575272 IRS4O14654 1257 aaPredicted RBP12.95□□□□□ -0.34
STRA6-221ENST00000575272 UBTFL1P0CB47 393 aaPredicted RBP12.95□□□□□ -0.34
STRA6-221ENST00000575272 CHRDL2Q6WN34 429 aa12.95□□□□□ -0.34
STRA6-221ENST00000575272 COG6Q9Y2V7 657 aa12.95□□□□□ -0.34
STRA6-221ENST00000575272 C10orf71Q711Q0 1435 aa12.95□□□□□ -0.34
STRA6-221ENST00000575272 NRXN2Q9P2S2 1712 aa12.94□□□□□ -0.34
STRA6-221ENST00000575272 HCLS1P14317 486 aaPredicted RBP12.94□□□□□ -0.34
STRA6-221ENST00000575272 MKRN4PQ13434 485 aaPredicted RBP12.94□□□□□ -0.34
STRA6-221ENST00000575272 MVPQ14764 893 aaKnown RBP12.94□□□□□ -0.34
STRA6-221ENST00000575272 C20orf194Q5TEA3 1177 aa12.94□□□□□ -0.34
STRA6-221ENST00000575272 CDHR2Q9BYE9 1310 aa12.93□□□□□ -0.34
STRA6-221ENST00000575272 LRP5O75197 1615 aa12.93□□□□□ -0.34
STRA6-221ENST00000575272 GNAI3P08754 354 aa12.93□□□□□ -0.34
STRA6-221ENST00000575272 SYNE4Q8N205 404 aa12.93□□□□□ -0.34
STRA6-221ENST00000575272 MEIS3Q99687 375 aa12.93□□□□□ -0.34
STRA6-221ENST00000575272 BRIP1Q9BX63 1249 aa12.93□□□□□ -0.34
STRA6-221ENST00000575272 CHMP4BQ9H444 224 aaKnown RBP12.93□□□□□ -0.34
STRA6-221ENST00000575272 DDX19BQ9UMR2 479 aa12.93□□□□□ -0.34
STRA6-221ENST00000575272 HDAC5Q9UQL6 1122 aa12.93□□□□□ -0.34
STRA6-221ENST00000575272 LAMB2P55268 1798 aa12.92□□□□□ -0.34
STRA6-221ENST00000575272 H7C1W4 665 aa12.92□□□□□ -0.34
STRA6-221ENST00000575272 PDE6BP35913 854 aa12.92□□□□□ -0.34
STRA6-221ENST00000575272 RIC1Q4ADV7 1423 aa12.92□□□□□ -0.34
STRA6-221ENST00000575272 RPGRQ92834 1020 aaKnown RBP12.92□□□□□ -0.34
STRA6-221ENST00000575272 NLRP3Q96P20 1036 aa12.92□□□□□ -0.34
STRA6-221ENST00000575272 PDE8AO60658 829 aa12.91□□□□□ -0.34
STRA6-221ENST00000575272 NEFLP07196 543 aa12.91□□□□□ -0.34
STRA6-221ENST00000575272 NBPF7P0C2Y1 421 aaPredicted RBP12.91□□□□□ -0.34
STRA6-221ENST00000575272 C2CD5Q86YS7 1000 aa12.91□□□□□ -0.34
STRA6-221ENST00000575272 USP44Q9H0E7 712 aa12.91□□□□□ -0.34
STRA6-221ENST00000575272 CHMP3Q9Y3E7 222 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms