RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 MIER1Q8N108 512 aa11.26□□□□□ -0.61
SMG6-216ENST00000575176 SYNE4Q8N205 404 aa11.26□□□□□ -0.61
SMG6-216ENST00000575176 PLBD2Q8NHP8 589 aa11.26□□□□□ -0.61
SMG6-216ENST00000575176 ADAMTSL1Q8N6G6 1762 aa11.26□□□□□ -0.61
SMG6-216ENST00000575176 RASSF7Q02833 373 aa11.25□□□□□ -0.61
SMG6-216ENST00000575176 EXOSC9Q06265 439 aaKnown RBP11.25□□□□□ -0.61
SMG6-216ENST00000575176 TCIRG1Q13488 830 aa11.25□□□□□ -0.61
SMG6-216ENST00000575176 DALRD3Q5D0E6 543 aaKnown RBP11.25□□□□□ -0.61
SMG6-216ENST00000575176 STYK1Q6J9G0 422 aa11.25□□□□□ -0.61
SMG6-216ENST00000575176 HYPKQ9NX55 129 aa11.25□□□□□ -0.61
SMG6-216ENST00000575176 SALL2Q9Y467 1007 aaPredicted RBP11.25□□□□□ -0.61
SMG6-216ENST00000575176 RNF123Q5XPI4 1314 aa11.25□□□□□ -0.61
SMG6-216ENST00000575176 PDE6BP35913 854 aa11.24□□□□□ -0.61
SMG6-216ENST00000575176 ST5P78524 1137 aa11.24□□□□□ -0.61
SMG6-216ENST00000575176 AIMP1Q12904 312 aaKnown RBP11.24□□□□□ -0.61
SMG6-216ENST00000575176 PARP10Q53GL7 1025 aa11.24□□□□□ -0.61
SMG6-216ENST00000575176 SLC10A5Q5PT55 438 aa11.24□□□□□ -0.61
SMG6-216ENST00000575176 PRPF40BQ6NWY9 871 aaKnown RBP11.24□□□□□ -0.61
SMG6-216ENST00000575176 FAM177BA6PVY3 158 aa11.23□□□□□ -0.61
SMG6-216ENST00000575176 TCERG1O14776 1098 aaKnown RBP11.23□□□□□ -0.61
SMG6-216ENST00000575176 IGKV5-2P06315 115 aa11.23□□□□□ -0.61
SMG6-216ENST00000575176 HOXA10P31260 410 aaPredicted RBP11.23□□□□□ -0.61
SMG6-216ENST00000575176 TRIM28Q13263 835 aaKnown RBP11.23□□□□□ -0.61
SMG6-216ENST00000575176 DIEXFQ68CQ4 756 aaKnown RBP11.23□□□□□ -0.61
SMG6-216ENST00000575176 OLFM4Q6UX06 510 aa11.23□□□□□ -0.61
SMG6-216ENST00000575176 ANKRD13DQ6ZTN6 518 aa11.23□□□□□ -0.61
SMG6-216ENST00000575176 TTLL6Q8N841 843 aa11.23□□□□□ -0.61
SMG6-216ENST00000575176 MASTLQ96GX5 879 aa11.23□□□□□ -0.61
SMG6-216ENST00000575176 PDZRN3Q9UPQ7 1066 aa11.23□□□□□ -0.61
SMG6-216ENST00000575176 LTBP3Q9NS15 1303 aa11.23□□□□□ -0.61
SMG6-216ENST00000575176 H0YIN7 160 aa11.22□□□□□ -0.61
SMG6-216ENST00000575176 SLFN5Q08AF3 891 aa11.22□□□□□ -0.61
SMG6-216ENST00000575176 SCN9AQ15858 1988 aa11.22□□□□□ -0.61
SMG6-216ENST00000575176 CCDC30Q5VVM6 783 aa11.22□□□□□ -0.61
SMG6-216ENST00000575176 TPTE2Q6XPS3 522 aa11.22□□□□□ -0.61
SMG6-216ENST00000575176 NPM2Q86SE8 214 aaKnown RBP11.22□□□□□ -0.61
SMG6-216ENST00000575176 CDCA7LQ96GN5 454 aa11.22□□□□□ -0.61
SMG6-216ENST00000575176 NYXQ9GZU5 481 aa11.22□□□□□ -0.61
SMG6-216ENST00000575176 ABCC4O15439 1325 aa11.21□□□□□ -0.61
SMG6-216ENST00000575176 ATP5J2-PTCD1G3V325 749 aa11.21□□□□□ -0.61
SMG6-216ENST00000575176 NPR1P16066 1061 aa11.21□□□□□ -0.61
SMG6-216ENST00000575176 HSP90AB3PQ58FF7 597 aa11.21□□□□□ -0.61
SMG6-216ENST00000575176 ZNF428Q96B54 188 aa11.21□□□□□ -0.61
SMG6-216ENST00000575176 DCAF8L1A6NGE4 600 aa11.2□□□□□ -0.62
SMG6-216ENST00000575176 CASP7P55210 303 aa11.2□□□□□ -0.62
SMG6-216ENST00000575176 FLIIQ13045 1269 aa11.2□□□□□ -0.62
SMG6-216ENST00000575176 METTL22Q9BUU2 404 aaPredicted RBP11.2□□□□□ -0.62
SMG6-216ENST00000575176 UTP14AQ9BVJ6 771 aaKnown RBP11.2□□□□□ -0.62
SMG6-216ENST00000575176 SCN4AP35499 1836 aa11.19□□□□□ -0.62
SMG6-216ENST00000575176 SH3TC1Q8TE82 1336 aa11.19□□□□□ -0.62
SMG6-216ENST00000575176 PI4KAP2A4QPH2 592 aa11.19□□□□□ -0.62
SMG6-216ENST00000575176 C21orf2O43822 256 aa11.19□□□□□ -0.62
SMG6-216ENST00000575176 HCLS1P14317 486 aaPredicted RBP11.19□□□□□ -0.62
SMG6-216ENST00000575176 PPP1R42Q7Z4L9 355 aa11.19□□□□□ -0.62
SMG6-216ENST00000575176 PI4KAP1Q8N8J0 262 aa11.19□□□□□ -0.62
SMG6-216ENST00000575176 ZNF622Q969S3 477 aaKnown RBP eCLIP11.19□□□□□ -0.624e-6■■■■□ 24.2
SMG6-216ENST00000575176 MAP3K2Q9Y2U5 619 aa11.19□□□□□ -0.62
SMG6-216ENST00000575176 SLC4A2P04920 1241 aa11.18□□□□□ -0.62
SMG6-216ENST00000575176 GOLGA2Q08379 1002 aa11.18□□□□□ -0.62
SMG6-216ENST00000575176 C9orf131Q5VYM1 1079 aa11.18□□□□□ -0.62
SMG6-216ENST00000575176 KSR2Q6VAB6 950 aa11.18□□□□□ -0.62
SMG6-216ENST00000575176 ARHGAP27Q6ZUM4 889 aa11.18□□□□□ -0.62
SMG6-216ENST00000575176 CNKSR1Q969H4 720 aa11.18□□□□□ -0.62
SMG6-216ENST00000575176 FAM89AQ96GI7 184 aa11.18□□□□□ -0.62
SMG6-216ENST00000575176 CRAMP1Q96RY5 1269 aa11.18□□□□□ -0.62
SMG6-216ENST00000575176 MYD88Q99836 296 aa11.18□□□□□ -0.62
SMG6-216ENST00000575176 MYH16Q9H6N6 1097 aa11.18□□□□□ -0.62
SMG6-216ENST00000575176 CDHR2Q9BYE9 1310 aa11.17□□□□□ -0.62
SMG6-216ENST00000575176 ZC3H4Q9UPT8 1303 aaKnown RBP11.17□□□□□ -0.62
SMG6-216ENST00000575176 NEURL1BA8MQ27 555 aa11.17□□□□□ -0.62
SMG6-216ENST00000575176 E9PSI1 815 aa11.17□□□□□ -0.62
SMG6-216ENST00000575176 CWF19L2Q2TBE0 894 aaKnown RBP11.17□□□□□ -0.62
SMG6-216ENST00000575176 CCDC191Q8NCU4 936 aa11.17□□□□□ -0.62
SMG6-216ENST00000575176 TRMT112Q9UI30 125 aaKnown RBP11.17□□□□□ -0.62
SMG6-216ENST00000575176 RTL9Q8NET4 1388 aa11.16□□□□□ -0.62
SMG6-216ENST00000575176 KIF3CO14782 793 aa11.16□□□□□ -0.62
SMG6-216ENST00000575176 PCCAP05165 728 aaPredicted RBP11.16□□□□□ -0.62
SMG6-216ENST00000575176 SF3B3Q15393 1217 aaKnown RBP11.16□□□□□ -0.62
SMG6-216ENST00000575176 ZBTB38Q8NAP3 1195 aaPredicted RBP11.16□□□□□ -0.62
SMG6-216ENST00000575176 RNF181Q9P0P0 153 aa11.16□□□□□ -0.62
SMG6-216ENST00000575176 ARAP2Q8WZ64 1704 aa11.15□□□□□ -0.62
SMG6-216ENST00000575176 F6X3S4 739 aa11.15□□□□□ -0.62
SMG6-216ENST00000575176 LMNB1P20700 586 aa11.15□□□□□ -0.62
SMG6-216ENST00000575176 CCDC93Q567U6 631 aa11.15□□□□□ -0.62
SMG6-216ENST00000575176 RIC3Q7Z5B4 369 aa11.15□□□□□ -0.62
SMG6-216ENST00000575176 MRPL50Q8N5N7 158 aaKnown RBP11.15□□□□□ -0.62
SMG6-216ENST00000575176 STK31Q9BXU1 1019 aa11.15□□□□□ -0.62
SMG6-216ENST00000575176 TAOK3Q9H2K8 898 aa11.15□□□□□ -0.62
SMG6-216ENST00000575176 ZNF219Q9P2Y4 722 aaPredicted RBP11.15□□□□□ -0.62
SMG6-216ENST00000575176 POTECB2RU33 542 aa11.14□□□□□ -0.63
SMG6-216ENST00000575176 H7C1W4 665 aa11.14□□□□□ -0.63
SMG6-216ENST00000575176 IRS4O14654 1257 aaPredicted RBP11.14□□□□□ -0.63
SMG6-216ENST00000575176 PPEF1O14829 653 aaPredicted RBP11.14□□□□□ -0.63
SMG6-216ENST00000575176 FKBP4Q02790 459 aaKnown RBP eCLIP11.14□□□□□ -0.63
SMG6-216ENST00000575176 BEND3Q5T5X7 828 aa11.14□□□□□ -0.63
SMG6-216ENST00000575176 DNAAF4Q8WXU2 420 aa11.14□□□□□ -0.63
SMG6-216ENST00000575176 SSH1Q8WYL5 1049 aa11.14□□□□□ -0.63
SMG6-216ENST00000575176 JARID2Q92833 1246 aaPredicted RBP11.14□□□□□ -0.63
SMG6-216ENST00000575176 CELF1Q92879 486 aaKnown RBP11.14□□□□□ -0.63
SMG6-216ENST00000575176 PSMD1Q99460 953 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms