RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-218ENST00000569440 CCDC88AQ3V6T2 1871 aa8.7□□□□□ -1.02
BBS4-218ENST00000569440 PPM1GO15355 546 aaPredicted RBP8.7□□□□□ -1.02
BBS4-218ENST00000569440 CANXP27824 592 aaKnown RBP8.7□□□□□ -1.02
BBS4-218ENST00000569440 EIF4A2Q14240 407 aaKnown RBP8.7□□□□□ -1.02
BBS4-218ENST00000569440 FBXO46Q6PJ61 603 aaPredicted RBP8.7□□□□□ -1.02
BBS4-218ENST00000569440 CDC37L1Q7L3B6 337 aa8.7□□□□□ -1.02
BBS4-218ENST00000569440 VSIG10Q8N0Z9 540 aa8.7□□□□□ -1.02
BBS4-218ENST00000569440 TESK2Q96S53 571 aa8.7□□□□□ -1.02
BBS4-218ENST00000569440 SETDB2Q96T68 719 aa8.7□□□□□ -1.02
BBS4-218ENST00000569440 ZNF408Q9H9D4 720 aa8.7□□□□□ -1.02
BBS4-218ENST00000569440 AFDNP55196 1824 aaKnown RBP8.7□□□□□ -1.02
BBS4-218ENST00000569440 HIRAP54198 1017 aaPredicted RBP8.69□□□□□ -1.02
BBS4-218ENST00000569440 CARD11Q9BXL7 1154 aa8.69□□□□□ -1.02
BBS4-218ENST00000569440 SZT2Q5T011 3432 aa8.68□□□□□ -1.02
BBS4-218ENST00000569440 TJP1Q07157 1748 aa8.68□□□□□ -1.02
BBS4-218ENST00000569440 POTEFA5A3E0 1075 aa8.68□□□□□ -1.02
BBS4-218ENST00000569440 HAX1O00165 279 aa8.68□□□□□ -1.02
BBS4-218ENST00000569440 ZNF296Q8WUU4 475 aaPredicted RBP8.68□□□□□ -1.02
BBS4-218ENST00000569440 OTUD5Q96G74 571 aa8.68□□□□□ -1.02
BBS4-218ENST00000569440 POLKQ9UBT6 870 aa8.68□□□□□ -1.02
BBS4-218ENST00000569440 HDAC9Q9UKV0 1011 aa8.68□□□□□ -1.02
BBS4-218ENST00000569440 COL4A5P29400 1685 aa8.68□□□□□ -1.02
BBS4-218ENST00000569440 SLX4Q8IY92 1834 aa8.68□□□□□ -1.02
BBS4-218ENST00000569440 CAMTA2O94983 1202 aa8.67□□□□□ -1.02
BBS4-218ENST00000569440 SLC10A3P09131 477 aa8.67□□□□□ -1.02
BBS4-218ENST00000569440 COL11A2P13942 1736 aaPredicted RBP8.67□□□□□ -1.02
BBS4-218ENST00000569440 ALDH1B1P30837 517 aa8.67□□□□□ -1.02
BBS4-218ENST00000569440 ZNF157P51786 506 aaPredicted RBP8.67□□□□□ -1.02
BBS4-218ENST00000569440 SLC39A6Q13433 755 aa8.67□□□□□ -1.02
BBS4-218ENST00000569440 NOM1Q5C9Z4 860 aaKnown RBP8.67□□□□□ -1.02
BBS4-218ENST00000569440 C1orf141Q5JVX7 400 aa8.67□□□□□ -1.02
BBS4-218ENST00000569440 DLK2Q6UY11 383 aa8.67□□□□□ -1.02
BBS4-218ENST00000569440 USP48Q86UV5 1035 aa8.67□□□□□ -1.02
BBS4-218ENST00000569440 SLC52A2Q9HAB3 445 aa8.67□□□□□ -1.02
BBS4-218ENST00000569440 TBC1D2BQ9UPU7 963 aa8.67□□□□□ -1.02
BBS4-218ENST00000569440 NPHP1O15259 732 aa8.66□□□□□ -1.02
BBS4-218ENST00000569440 STARD3NLO95772 234 aa8.66□□□□□ -1.02
BBS4-218ENST00000569440 INTS3Q68E01 1043 aaKnown RBP8.66□□□□□ -1.02
BBS4-218ENST00000569440 CC2D2BQ6DHV5 1058 aa8.66□□□□□ -1.02
BBS4-218ENST00000569440 IFNLR1Q8IU57 520 aaPredicted RBP8.66□□□□□ -1.02
BBS4-218ENST00000569440 LARGE2Q8N3Y3 721 aa8.66□□□□□ -1.02
BBS4-218ENST00000569440 CARD14Q9BXL6 1004 aa8.66□□□□□ -1.02
BBS4-218ENST00000569440 GBA2Q9HCG7 927 aaPredicted RBP8.66□□□□□ -1.02
BBS4-218ENST00000569440 ZBTB47Q9UFB7 747 aaPredicted RBP8.66□□□□□ -1.02
BBS4-218ENST00000569440 ANKRD31Q8N7Z5 1873 aa8.66□□□□□ -1.02
BBS4-218ENST00000569440 MKI67P46013 3256 aaKnown RBP8.65□□□□□ -1.02
BBS4-218ENST00000569440 SLC24A1O60721 1099 aa8.65□□□□□ -1.02
BBS4-218ENST00000569440 IL6STP40189 918 aaPredicted RBP8.65□□□□□ -1.02
BBS4-218ENST00000569440 GMPSP49915 693 aaPredicted RBP8.65□□□□□ -1.02
BBS4-218ENST00000569440 CXCL9Q07325 125 aa8.65□□□□□ -1.02
BBS4-218ENST00000569440 GRIPAP1Q4V328 841 aa8.65□□□□□ -1.02
BBS4-218ENST00000569440 C2orf69Q8N8R5 385 aa8.65□□□□□ -1.02
BBS4-218ENST00000569440 LGR6Q9HBX8 967 aa8.65□□□□□ -1.02
BBS4-218ENST00000569440 A0A0C4DFX4 3053 aa8.65□□□□□ -1.02
BBS4-218ENST00000569440 CDHR2Q9BYE9 1310 aa8.64□□□□□ -1.03
BBS4-218ENST00000569440 GPR25O00155 361 aa8.64□□□□□ -1.03
BBS4-218ENST00000569440 TBC1D8O95759 1140 aa8.64□□□□□ -1.03
BBS4-218ENST00000569440 NBPF5PQ86XG9 351 aaPredicted RBP8.64□□□□□ -1.03
BBS4-218ENST00000569440 NIM1KQ8IY84 436 aa8.64□□□□□ -1.03
BBS4-218ENST00000569440 TRPM4Q8TD43 1214 aa8.64□□□□□ -1.03
BBS4-218ENST00000569440 NPC1L1Q9UHC9 1359 aa8.63□□□□□ -1.03
BBS4-218ENST00000569440 C19orf67A6NJJ6 358 aa8.63□□□□□ -1.03
BBS4-218ENST00000569440 H0YGN5 161 aa8.63□□□□□ -1.03
BBS4-218ENST00000569440 EN2P19622 333 aaPredicted RBP8.63□□□□□ -1.03
BBS4-218ENST00000569440 CLEC4GQ6UXB4 293 aa8.63□□□□□ -1.03
BBS4-218ENST00000569440 VPS33BQ9H267 617 aa8.63□□□□□ -1.03
BBS4-218ENST00000569440 ZNRF3Q9ULT6 936 aa8.63□□□□□ -1.03
BBS4-218ENST00000569440 CRY2Q49AN0 593 aa8.62□□□□□ -1.03
BBS4-218ENST00000569440 TPTE2Q6XPS3 522 aa8.62□□□□□ -1.03
BBS4-218ENST00000569440 RASAL3Q86YV0 1011 aa8.62□□□□□ -1.03
BBS4-218ENST00000569440 AEBP1Q8IUX7 1158 aa8.62□□□□□ -1.03
BBS4-218ENST00000569440 SIN3AQ96ST3 1273 aa8.62□□□□□ -1.03
BBS4-218ENST00000569440 RNMTO43148 476 aaKnown RBP8.61□□□□□ -1.03
BBS4-218ENST00000569440 CD44P16070 742 aaKnown RBP8.61□□□□□ -1.03
BBS4-218ENST00000569440 KRT26Q7Z3Y9 468 aa8.61□□□□□ -1.03
BBS4-218ENST00000569440 SPOCK2Q92563 424 aa8.61□□□□□ -1.03
BBS4-218ENST00000569440 CFHR5Q9BXR6 569 aa8.61□□□□□ -1.03
BBS4-218ENST00000569440 TEX13AQ9BXU3 409 aaPredicted RBP8.61□□□□□ -1.03
BBS4-218ENST00000569440 RBM27Q9P2N5 1060 aaKnown RBP8.61□□□□□ -1.03
BBS4-218ENST00000569440 CNOT7Q9UIV1 285 aaKnown RBP8.61□□□□□ -1.03
BBS4-218ENST00000569440 BCORQ6W2J9 1755 aa8.61□□□□□ -1.03
BBS4-218ENST00000569440 SHTN1A0MZ66 631 aa8.6□□□□□ -1.03
BBS4-218ENST00000569440 PPIP5K2O43314 1243 aa8.6□□□□□ -1.03
BBS4-218ENST00000569440 FKTNO75072 461 aa8.6□□□□□ -1.03
BBS4-218ENST00000569440 A1BGP04217 495 aa8.6□□□□□ -1.03
BBS4-218ENST00000569440 HOXA10P31260 410 aaPredicted RBP8.6□□□□□ -1.03
BBS4-218ENST00000569440 TM4SF4P48230 202 aa8.6□□□□□ -1.03
BBS4-218ENST00000569440 EVX2Q03828 476 aa8.6□□□□□ -1.03
BBS4-218ENST00000569440 AOC3Q16853 763 aa8.6□□□□□ -1.03
BBS4-218ENST00000569440 SLC51AQ86UW1 340 aa8.6□□□□□ -1.03
BBS4-218ENST00000569440 DZIP3Q86Y13 1208 aaKnown RBP8.6□□□□□ -1.03
BBS4-218ENST00000569440 COL25A1Q9BXS0 654 aaPredicted RBP8.6□□□□□ -1.03
BBS4-218ENST00000569440 PRO3102Q9H379 93 aa8.6□□□□□ -1.03
BBS4-218ENST00000569440 ZNF330Q9Y3S2 320 aaPredicted RBP8.6□□□□□ -1.03
BBS4-218ENST00000569440 TRPM7Q96QT4 1865 aa8.6□□□□□ -1.03
BBS4-218ENST00000569440 ADM5C9JUS6 153 aa8.59□□□□□ -1.03
BBS4-218ENST00000569440 H7C1D1 291 aa8.59□□□□□ -1.03
BBS4-218ENST00000569440 ARMC5Q96C12 935 aa8.59□□□□□ -1.03
BBS4-218ENST00000569440 ZNF496Q96IT1 587 aaPredicted RBP8.59□□□□□ -1.03
BBS4-218ENST00000569440 BCL2L13Q9BXK5 485 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms