RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 NGLY1Q96IV0 654 aa19.01■□□□□ 0.63
SNX20-204ENST00000568993 ESYT1Q9BSJ8 1104 aa19.01■□□□□ 0.63
SNX20-204ENST00000568993 IFIT2P09913 472 aaKnown RBP19■□□□□ 0.63
SNX20-204ENST00000568993 GIGYF2Q6Y7W6 1299 aaKnown RBP19■□□□□ 0.63
SNX20-204ENST00000568993 IL6STP40189 918 aaPredicted RBP19■□□□□ 0.63
SNX20-204ENST00000568993 LMBR1LQ6UX01 489 aa19■□□□□ 0.63
SNX20-204ENST00000568993 EAF2Q96CJ1 260 aaPredicted RBP19■□□□□ 0.63
SNX20-204ENST00000568993 EPB41L2O43491 1005 aaKnown RBP18.99■□□□□ 0.63
SNX20-204ENST00000568993 AACSQ86V21 672 aa18.99■□□□□ 0.63
SNX20-204ENST00000568993 KLHDC4Q8TBB5 520 aa18.99■□□□□ 0.63
SNX20-204ENST00000568993 CNTROBQ8N137 903 aa18.98■□□□□ 0.63
SNX20-204ENST00000568993 C8orf37Q96NL8 207 aa18.98■□□□□ 0.63
SNX20-204ENST00000568993 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.98■□□□□ 0.63
SNX20-204ENST00000568993 HSP90AB3PQ58FF7 597 aa18.98■□□□□ 0.63
SNX20-204ENST00000568993 HSCBQ8IWL3 235 aa18.98■□□□□ 0.63
SNX20-204ENST00000568993 SIL1Q9H173 461 aa18.98■□□□□ 0.63
SNX20-204ENST00000568993 ZBTB1Q9Y2K1 713 aa18.98■□□□□ 0.63
SNX20-204ENST00000568993 ERVV-1B6SEH8 477 aa18.97■□□□□ 0.63
SNX20-204ENST00000568993 PCCAP05165 728 aaPredicted RBP18.97■□□□□ 0.63
SNX20-204ENST00000568993 ANTXR1Q9H6X2 564 aa18.97■□□□□ 0.63
SNX20-204ENST00000568993 RREB1Q92766 1687 aa18.96■□□□□ 0.63
SNX20-204ENST00000568993 RABEP1Q15276 862 aa18.96■□□□□ 0.63
SNX20-204ENST00000568993 CERKQ8TCT0 537 aa18.96■□□□□ 0.63
SNX20-204ENST00000568993 ACSBG1Q96GR2 724 aa18.96■□□□□ 0.63
SNX20-204ENST00000568993 PLA2G12BQ9BX93 195 aa18.96■□□□□ 0.63
SNX20-204ENST00000568993 ZNF330Q9Y3S2 320 aaPredicted RBP18.96■□□□□ 0.63
SNX20-204ENST00000568993 ANKRD36CQ5JPF3 1778 aa18.96■□□□□ 0.63
SNX20-204ENST00000568993 FAM98CQ17RN3 349 aaKnown RBP18.96■□□□□ 0.63
SNX20-204ENST00000568993 SMARCC1Q92922 1105 aaPredicted RBP18.96■□□□□ 0.63
SNX20-204ENST00000568993 ZBTB38Q8NAP3 1195 aaPredicted RBP18.95■□□□□ 0.62
SNX20-204ENST00000568993 ZNF831Q5JPB2 1677 aa18.95■□□□□ 0.62
SNX20-204ENST00000568993 LOC102724428A0A0B4J2F2 783 aa18.95■□□□□ 0.62
SNX20-204ENST00000568993 NUP98P52948 1817 aa18.95■□□□□ 0.62
SNX20-204ENST00000568993 EIF5P55010 431 aaKnown RBP18.95■□□□□ 0.62
SNX20-204ENST00000568993 SIK1P57059 783 aa18.95■□□□□ 0.62
SNX20-204ENST00000568993 HLFQ16534 295 aa18.94■□□□□ 0.62
SNX20-204ENST00000568993 INTS5Q6P9B9 1019 aaKnown RBP18.94■□□□□ 0.62
SNX20-204ENST00000568993 CDHR2Q9BYE9 1310 aa18.93■□□□□ 0.62
SNX20-204ENST00000568993 IL17RAQ96F46 866 aa18.93■□□□□ 0.62
SNX20-204ENST00000568993 CCDC8Q9H0W5 538 aaPredicted RBP18.93■□□□□ 0.62
SNX20-204ENST00000568993 CCDC87Q9NVE4 849 aa18.93■□□□□ 0.62
SNX20-204ENST00000568993 MAP4K4O95819 1239 aaPredicted RBP18.93■□□□□ 0.62
SNX20-204ENST00000568993 ATP6V1AP38606 617 aa18.93■□□□□ 0.62
SNX20-204ENST00000568993 TFCP2Q12800 502 aa18.93■□□□□ 0.62
SNX20-204ENST00000568993 TNNI3KQ59H18 835 aa18.93■□□□□ 0.62
SNX20-204ENST00000568993 NLRP10Q86W26 655 aa18.93■□□□□ 0.62
SNX20-204ENST00000568993 EVI5LQ96CN4 794 aa18.93■□□□□ 0.62
SNX20-204ENST00000568993 GPR108Q9NPR9 543 aa18.93■□□□□ 0.62
SNX20-204ENST00000568993 FPGT-TNNI3KV9GXZ4 949 aa18.93■□□□□ 0.62
SNX20-204ENST00000568993 PALLDQ8WX93 1383 aa18.92■□□□□ 0.62
SNX20-204ENST00000568993 CIAO1O76071 339 aa18.92■□□□□ 0.62
SNX20-204ENST00000568993 CSF1RP07333 972 aa18.92■□□□□ 0.62
SNX20-204ENST00000568993 RTL5Q5HYW3 569 aaPredicted RBP18.92■□□□□ 0.62
SNX20-204ENST00000568993 ATG9AQ7Z3C6 839 aa18.92■□□□□ 0.62
SNX20-204ENST00000568993 USP21Q9UK80 565 aa18.92■□□□□ 0.62
SNX20-204ENST00000568993 FBXO3Q9UK99 471 aa18.92■□□□□ 0.62
SNX20-204ENST00000568993 SGSM2O43147 1006 aa18.91■□□□□ 0.62
SNX20-204ENST00000568993 NBR1Q14596 966 aa18.91■□□□□ 0.62
SNX20-204ENST00000568993 DZIP3Q86Y13 1208 aaKnown RBP18.91■□□□□ 0.62
SNX20-204ENST00000568993 TLR7Q9NYK1 1049 aaKnown RBP18.91■□□□□ 0.62
SNX20-204ENST00000568993 THSD7AQ9UPZ6 1657 aa18.91■□□□□ 0.62
SNX20-204ENST00000568993 IL15P40933 162 aaPredicted RBP18.91■□□□□ 0.62
SNX20-204ENST00000568993 ANAPC15P60006 121 aa18.91■□□□□ 0.62
SNX20-204ENST00000568993 CHMP3Q9Y3E7 222 aa18.91■□□□□ 0.62
SNX20-204ENST00000568993 CRKLP46109 303 aaKnown RBP18.9■□□□□ 0.62
SNX20-204ENST00000568993 ITPK1Q13572 414 aa18.9■□□□□ 0.62
SNX20-204ENST00000568993 SLKQ9H2G2 1235 aaPredicted RBP18.9■□□□□ 0.62
SNX20-204ENST00000568993 MYH14Q7Z406 1995 aaKnown RBP18.9■□□□□ 0.62
SNX20-204ENST00000568993 K7ELQ4 463 aaPredicted RBP18.9■□□□□ 0.62
SNX20-204ENST00000568993 EYA2O00167 538 aa18.9■□□□□ 0.62
SNX20-204ENST00000568993 KCNQ2O43526 872 aa18.9■□□□□ 0.62
SNX20-204ENST00000568993 CD2BP2O95400 341 aaKnown RBP18.9■□□□□ 0.62
SNX20-204ENST00000568993 ATP5JP18859 108 aa18.9■□□□□ 0.62
SNX20-204ENST00000568993 MCCP23508 829 aa18.9■□□□□ 0.62
SNX20-204ENST00000568993 ZNF34Q8IZ26 560 aa18.9■□□□□ 0.62
SNX20-204ENST00000568993 FAM89AQ96GI7 184 aa18.9■□□□□ 0.62
SNX20-204ENST00000568993 ARXQ96QS3 562 aa18.9■□□□□ 0.62
SNX20-204ENST00000568993 ANO2Q9NQ90 1003 aa18.9■□□□□ 0.62
SNX20-204ENST00000568993 DBNLQ9UJU6 430 aaKnown RBP18.9■□□□□ 0.62
SNX20-204ENST00000568993 COL5A3P25940 1745 aaPredicted RBP18.89■□□□□ 0.61
SNX20-204ENST00000568993 IL25Q9H293 177 aa18.89■□□□□ 0.61
SNX20-204ENST00000568993 RUFY2Q8WXA3 655 aa18.88■□□□□ 0.61
SNX20-204ENST00000568993 TBC1D2BQ9UPU7 963 aa18.88■□□□□ 0.61
SNX20-204ENST00000568993 HIP1O00291 1037 aa18.88■□□□□ 0.61
SNX20-204ENST00000568993 IL27Q8NEV9 243 aa18.88■□□□□ 0.61
SNX20-204ENST00000568993 A0A0G2JS52 829 aa18.87■□□□□ 0.61
SNX20-204ENST00000568993 GPTP24298 496 aa18.87■□□□□ 0.61
SNX20-204ENST00000568993 DDIT3P35638 169 aa18.87■□□□□ 0.61
SNX20-204ENST00000568993 NFKBIBQ15653 356 aa18.87■□□□□ 0.61
SNX20-204ENST00000568993 CCDC57Q2TAC2 916 aa18.87■□□□□ 0.61
SNX20-204ENST00000568993 MYH3P11055 1940 aa18.87■□□□□ 0.61
SNX20-204ENST00000568993 DIAPH3Q9NSV4 1193 aa18.86■□□□□ 0.61
SNX20-204ENST00000568993 LSG1Q9H089 658 aaKnown RBP18.86■□□□□ 0.61
SNX20-204ENST00000568993 BOLA2Q9H3K6 86 aa18.86■□□□□ 0.61
SNX20-204ENST00000568993 SNRKQ9NRH2 765 aa18.86■□□□□ 0.61
SNX20-204ENST00000568993 RAD50Q92878 1312 aa18.85■□□□□ 0.61
SNX20-204ENST00000568993 HSPA4P34932 840 aa18.85■□□□□ 0.61
SNX20-204ENST00000568993 LRRC24Q50LG9 513 aa18.85■□□□□ 0.61
SNX20-204ENST00000568993 AK7Q96M32 723 aa18.85■□□□□ 0.61
SNX20-204ENST00000568993 CHMP5Q9NZZ3 219 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms