RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 KCNQ4P56696 695 aa7.31□□□□□ -1.24
HERPUD1-212ENST00000567944 CTBSQ01459 385 aa7.31□□□□□ -1.24
HERPUD1-212ENST00000567944 HIF1AQ16665 826 aa7.31□□□□□ -1.24
HERPUD1-212ENST00000567944 CEP63Q96MT8 703 aa7.31□□□□□ -1.24
HERPUD1-212ENST00000567944 NEUROD4Q9HD90 331 aa7.31□□□□□ -1.24
HERPUD1-212ENST00000567944 CD33P20138 364 aa7.3□□□□□ -1.24
HERPUD1-212ENST00000567944 FKBP4Q02790 459 aaKnown RBP eCLIP7.3□□□□□ -1.24
HERPUD1-212ENST00000567944 ATCAYQ86WG3 371 aa7.3□□□□□ -1.24
HERPUD1-212ENST00000567944 CCER1Q8TC90 406 aaPredicted RBP7.3□□□□□ -1.24
HERPUD1-212ENST00000567944 BRD7Q9NPI1 651 aa7.3□□□□□ -1.24
HERPUD1-212ENST00000567944 USP20Q9Y2K6 914 aa7.3□□□□□ -1.24
HERPUD1-212ENST00000567944 IVNS1ABPQ9Y6Y0 642 aa7.3□□□□□ -1.24
HERPUD1-212ENST00000567944 FGFR3P22607 806 aa7.29□□□□□ -1.24
HERPUD1-212ENST00000567944 ARHGAP4P98171 946 aa7.29□□□□□ -1.24
HERPUD1-212ENST00000567944 SF3B2Q13435 895 aaKnown RBP7.29□□□□□ -1.24
HERPUD1-212ENST00000567944 LAMC2Q13753 1193 aa7.29□□□□□ -1.24
HERPUD1-212ENST00000567944 FOXR1Q6PIV2 292 aa7.29□□□□□ -1.24
HERPUD1-212ENST00000567944 AEBP1Q8IUX7 1158 aa7.29□□□□□ -1.24
HERPUD1-212ENST00000567944 TRERF1Q96PN7 1200 aa7.29□□□□□ -1.24
HERPUD1-212ENST00000567944 MTMR7Q9Y216 660 aa7.29□□□□□ -1.24
HERPUD1-212ENST00000567944 SOWAHDA6NJG2 315 aa7.28□□□□□ -1.24
HERPUD1-212ENST00000567944 ZAP70P43403 619 aa7.28□□□□□ -1.24
HERPUD1-212ENST00000567944 EIF1AXP47813 144 aaKnown RBP7.28□□□□□ -1.24
HERPUD1-212ENST00000567944 FAM182BQ5T319 152 aa7.28□□□□□ -1.24
HERPUD1-212ENST00000567944 CNTNAP3BQ96NU0 1288 aa7.28□□□□□ -1.24
HERPUD1-212ENST00000567944 SLC30A3Q99726 388 aa7.28□□□□□ -1.24
HERPUD1-212ENST00000567944 CNTNAP3Q9BZ76 1288 aa7.28□□□□□ -1.24
HERPUD1-212ENST00000567944 ADAMTS8Q9UP79 889 aa7.28□□□□□ -1.24
HERPUD1-212ENST00000567944 H3BRB1 525 aa7.27□□□□□ -1.25
HERPUD1-212ENST00000567944 ARSDP51689 593 aa7.27□□□□□ -1.25
HERPUD1-212ENST00000567944 TUT1Q9H6E5 874 aaKnown RBP7.27□□□□□ -1.25
HERPUD1-212ENST00000567944 MBIPQ9NS73 344 aa7.27□□□□□ -1.25
HERPUD1-212ENST00000567944 MARK1Q9P0L2 795 aa7.27□□□□□ -1.25
HERPUD1-212ENST00000567944 KLF15Q9UIH9 416 aa7.27□□□□□ -1.25
HERPUD1-212ENST00000567944 PHF24Q9UPV7 400 aa7.27□□□□□ -1.25
HERPUD1-212ENST00000567944 KCNH4Q9UQ05 1017 aa7.27□□□□□ -1.25
HERPUD1-212ENST00000567944 RTCBQ9Y3I0 505 aaKnown RBP7.27□□□□□ -1.25
HERPUD1-212ENST00000567944 KCNMB2Q9Y691 235 aa7.27□□□□□ -1.25
HERPUD1-212ENST00000567944 FZD6O60353 706 aa7.26□□□□□ -1.25
HERPUD1-212ENST00000567944 TRIP4Q15650 581 aaPredicted RBP7.26□□□□□ -1.25
HERPUD1-212ENST00000567944 NOM1Q5C9Z4 860 aaKnown RBP7.26□□□□□ -1.25
HERPUD1-212ENST00000567944 ABTB2Q8N961 1025 aa7.26□□□□□ -1.25
HERPUD1-212ENST00000567944 GSX2Q9BZM3 304 aa7.26□□□□□ -1.25
HERPUD1-212ENST00000567944 IGF1RP08069 1367 aa7.25□□□□□ -1.25
HERPUD1-212ENST00000567944 FAM13AO94988 1023 aa7.25□□□□□ -1.25
HERPUD1-212ENST00000567944 SLURP2P0DP57 97 aa7.25□□□□□ -1.25
HERPUD1-212ENST00000567944 MX2P20592 715 aa7.25□□□□□ -1.25
HERPUD1-212ENST00000567944 GPAT2Q6NUI2 795 aa7.25□□□□□ -1.25
HERPUD1-212ENST00000567944 RGL4Q8IZJ4 473 aa7.25□□□□□ -1.25
HERPUD1-212ENST00000567944 SRSF11Q05519 484 aaKnown RBP7.24□□□□□ -1.25
HERPUD1-212ENST00000567944 GPR152Q8TDT2 470 aa7.24□□□□□ -1.25
HERPUD1-212ENST00000567944 CCDC87Q9NVE4 849 aa7.24□□□□□ -1.25
HERPUD1-212ENST00000567944 ADAMTS2O95450 1211 aa7.23□□□□□ -1.25
HERPUD1-212ENST00000567944 EGFRP00533 1210 aa7.23□□□□□ -1.25
HERPUD1-212ENST00000567944 PDGFAP04085 211 aa7.23□□□□□ -1.25
HERPUD1-212ENST00000567944 SPEM2Q0P670 501 aa7.23□□□□□ -1.25
HERPUD1-212ENST00000567944 RAB44Q7Z6P3 723 aaPredicted RBP7.23□□□□□ -1.25
HERPUD1-212ENST00000567944 GLYCTKQ8IVS8 523 aa7.23□□□□□ -1.25
HERPUD1-212ENST00000567944 ACDQ96AP0 544 aa7.23□□□□□ -1.25
HERPUD1-212ENST00000567944 GGNBP2Q9H3C7 697 aa7.23□□□□□ -1.25
HERPUD1-212ENST00000567944 ZFATQ9P243 1243 aa7.23□□□□□ -1.25
HERPUD1-212ENST00000567944 RNF225M0QZC1 329 aaPredicted RBP7.22□□□□□ -1.25
HERPUD1-212ENST00000567944 BMP4P12644 408 aa7.22□□□□□ -1.25
HERPUD1-212ENST00000567944 C1orf229Q6ZS94 237 aaPredicted RBP7.22□□□□□ -1.25
HERPUD1-212ENST00000567944 CMTR1Q8N1G2 835 aaKnown RBP7.22□□□□□ -1.25
HERPUD1-212ENST00000567944 WHAMMQ8TF30 809 aa7.22□□□□□ -1.25
HERPUD1-212ENST00000567944 EDEM1Q92611 657 aa7.22□□□□□ -1.25
HERPUD1-212ENST00000567944 MDFIQ99750 246 aa7.22□□□□□ -1.25
HERPUD1-212ENST00000567944 C11orf16Q9NQ32 467 aa7.22□□□□□ -1.25
HERPUD1-212ENST00000567944 POLIQ9UNA4 740 aa7.22□□□□□ -1.25
HERPUD1-212ENST00000567944 PATL2C9JE40 543 aaKnown RBP7.21□□□□□ -1.26
HERPUD1-212ENST00000567944 IGHA2P01877 340 aa7.21□□□□□ -1.26
HERPUD1-212ENST00000567944 MZF1P28698 734 aaPredicted RBP7.21□□□□□ -1.26
HERPUD1-212ENST00000567944 DNM1Q05193 864 aaKnown RBP7.21□□□□□ -1.26
HERPUD1-212ENST00000567944 CCINQ13939 588 aa7.21□□□□□ -1.26
HERPUD1-212ENST00000567944 XP32Q5T750 250 aa7.21□□□□□ -1.26
HERPUD1-212ENST00000567944 ZNF468Q5VIY5 522 aaPredicted RBP7.21□□□□□ -1.26
HERPUD1-212ENST00000567944 ALKBH2Q6NS38 261 aa7.21□□□□□ -1.26
HERPUD1-212ENST00000567944 PIK3R5Q8WYR1 880 aa7.21□□□□□ -1.26
HERPUD1-212ENST00000567944 NUDT16Q96DE0 195 aaKnown RBP7.21□□□□□ -1.26
HERPUD1-212ENST00000567944 XYLBO75191 536 aa7.2□□□□□ -1.26
HERPUD1-212ENST00000567944 SASH3O75995 380 aa7.2□□□□□ -1.26
HERPUD1-212ENST00000567944 ARAFP10398 606 aa7.2□□□□□ -1.26
HERPUD1-212ENST00000567944 EPB42P16452 691 aa7.2□□□□□ -1.26
HERPUD1-212ENST00000567944 TARSP26639 723 aaKnown RBP7.2□□□□□ -1.26
HERPUD1-212ENST00000567944 IRS1P35568 1242 aa7.2□□□□□ -1.26
HERPUD1-212ENST00000567944 MAP2K3P46734 347 aa7.2□□□□□ -1.26
HERPUD1-212ENST00000567944 PCBP4P57723 403 aaKnown RBP7.2□□□□□ -1.26
HERPUD1-212ENST00000567944 LYPD4Q6UWN0 246 aa7.2□□□□□ -1.26
HERPUD1-212ENST00000567944 FCHSD1Q86WN1 690 aa7.2□□□□□ -1.26
HERPUD1-212ENST00000567944 A6NHS1 94 aa7.19□□□□□ -1.26
HERPUD1-212ENST00000567944 ZNF385CQ66K41 422 aaPredicted RBP7.19□□□□□ -1.26
HERPUD1-212ENST00000567944 SYT9Q86SS6 491 aa7.19□□□□□ -1.26
HERPUD1-212ENST00000567944 GJD3Q8N144 294 aa7.19□□□□□ -1.26
HERPUD1-212ENST00000567944 OXCT2Q9BYC2 517 aaPredicted RBP7.19□□□□□ -1.26
HERPUD1-212ENST00000567944 AVENQ9NQS1 362 aaPredicted RBP7.19□□□□□ -1.26
HERPUD1-212ENST00000567944 GGA1Q9UJY5 639 aa7.19□□□□□ -1.26
HERPUD1-212ENST00000567944 UBAP1LF5GYI3 381 aa7.18□□□□□ -1.26
HERPUD1-212ENST00000567944 NFKB1P19838 968 aa7.18□□□□□ -1.26
HERPUD1-212ENST00000567944 TRIM26Q12899 539 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms