RNA–Protein interactions for RNA: ENST00000567811.1

SMPD3-210, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-210ENST00000567811 NFKBIEO00221 500 aa9.29□□□□□ -0.92
SMPD3-210ENST00000567811 KIF3CO14782 793 aa9.29□□□□□ -0.92
SMPD3-210ENST00000567811 HOXA10P31260 410 aaPredicted RBP9.29□□□□□ -0.92
SMPD3-210ENST00000567811 PRELPP51888 382 aa9.29□□□□□ -0.92
SMPD3-210ENST00000567811 CCDC30Q5VVM6 783 aa9.29□□□□□ -0.92
SMPD3-210ENST00000567811 NLRP10Q86W26 655 aa9.29□□□□□ -0.92
SMPD3-210ENST00000567811 RTKN2Q8IZC4 609 aa9.29□□□□□ -0.92
SMPD3-210ENST00000567811 FAM9BQ8IZU0 186 aa9.29□□□□□ -0.92
SMPD3-210ENST00000567811 RPGRQ92834 1020 aaKnown RBP9.29□□□□□ -0.92
SMPD3-210ENST00000567811 RBM17Q96I25 401 aaKnown RBP9.29□□□□□ -0.92
SMPD3-210ENST00000567811 CRAMP1Q96RY5 1269 aa9.29□□□□□ -0.92
SMPD3-210ENST00000567811 TRMT112Q9UI30 125 aaKnown RBP9.29□□□□□ -0.92
SMPD3-210ENST00000567811 SALL2Q9Y467 1007 aaPredicted RBP9.29□□□□□ -0.92
SMPD3-210ENST00000567811 GLTPD2A6NH11 291 aa9.28□□□□□ -0.92
SMPD3-210ENST00000567811 TOMM70O94826 608 aa9.28□□□□□ -0.92
SMPD3-210ENST00000567811 NTSR2O95665 410 aa9.28□□□□□ -0.92
SMPD3-210ENST00000567811 CRY2Q49AN0 593 aa9.28□□□□□ -0.92
SMPD3-210ENST00000567811 CC2D2BQ6DHV5 1058 aa9.28□□□□□ -0.92
SMPD3-210ENST00000567811 RIC3Q7Z5B4 369 aa9.28□□□□□ -0.92
SMPD3-210ENST00000567811 WDR63Q8IWG1 891 aa9.28□□□□□ -0.92
SMPD3-210ENST00000567811 C16orf71Q8IYS4 520 aaPredicted RBP9.28□□□□□ -0.92
SMPD3-210ENST00000567811 TAOK3Q9H2K8 898 aa9.28□□□□□ -0.92
SMPD3-210ENST00000567811 PHAXQ9H814 394 aaKnown RBP9.28□□□□□ -0.92
SMPD3-210ENST00000567811 NMRK2Q9NPI5 230 aa9.28□□□□□ -0.92
SMPD3-210ENST00000567811 IL16Q14005 1332 aa9.28□□□□□ -0.92
SMPD3-210ENST00000567811 LTBP3Q9NS15 1303 aa9.28□□□□□ -0.92
SMPD3-210ENST00000567811 COL11A2P13942 1736 aaPredicted RBP9.28□□□□□ -0.92
SMPD3-210ENST00000567811 ARFGEF2Q9Y6D5 1785 aa9.27□□□□□ -0.92
SMPD3-210ENST00000567811 TRIM28Q13263 835 aaKnown RBP9.27□□□□□ -0.93
SMPD3-210ENST00000567811 GRIPAP1Q4V328 841 aa9.27□□□□□ -0.93
SMPD3-210ENST00000567811 CCDC93Q567U6 631 aa9.27□□□□□ -0.93
SMPD3-210ENST00000567811 SYNE4Q8N205 404 aa9.27□□□□□ -0.93
SMPD3-210ENST00000567811 TSPYL6Q8N831 410 aa9.27□□□□□ -0.93
SMPD3-210ENST00000567811 ISCA1Q9BUE6 129 aa9.27□□□□□ -0.93
SMPD3-210ENST00000567811 TMX4Q9H1E5 349 aaPredicted RBP9.27□□□□□ -0.93
SMPD3-210ENST00000567811 ZC3H4Q9UPT8 1303 aaKnown RBP9.27□□□□□ -0.93
SMPD3-210ENST00000567811 ANKRD36CQ5JPF3 1778 aa9.27□□□□□ -0.93
SMPD3-210ENST00000567811 IBTKQ9P2D0 1353 aaPredicted RBP9.26□□□□□ -0.93
SMPD3-210ENST00000567811 TAF1P21675 1872 aa9.26□□□□□ -0.93
SMPD3-210ENST00000567811 ATP5J2-PTCD1G3V325 749 aa9.26□□□□□ -0.93
SMPD3-210ENST00000567811 BBOX1O75936 387 aa9.26□□□□□ -0.93
SMPD3-210ENST00000567811 HCLS1P14317 486 aaPredicted RBP9.26□□□□□ -0.93
SMPD3-210ENST00000567811 VEGFAP15692 232 aaPredicted RBP9.26□□□□□ -0.93
SMPD3-210ENST00000567811 FKBP4Q02790 459 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMPD3-210ENST00000567811 OLFM4Q6UX06 510 aa9.26□□□□□ -0.93
SMPD3-210ENST00000567811 TSR2Q969E8 191 aaKnown RBP9.26□□□□□ -0.93
SMPD3-210ENST00000567811 RNF123Q5XPI4 1314 aa9.26□□□□□ -0.93
SMPD3-210ENST00000567811 SH3TC1Q8TE82 1336 aa9.26□□□□□ -0.93
SMPD3-210ENST00000567811 TCERG1O14776 1098 aaKnown RBP9.25□□□□□ -0.93
SMPD3-210ENST00000567811 DDX58O95786 925 aaKnown RBP9.25□□□□□ -0.93
SMPD3-210ENST00000567811 SLC4A2P04920 1241 aa9.25□□□□□ -0.93
SMPD3-210ENST00000567811 GOLGA2Q08379 1002 aa9.25□□□□□ -0.93
SMPD3-210ENST00000567811 TWISTNBQ3B726 338 aaPredicted RBP9.25□□□□□ -0.93
SMPD3-210ENST00000567811 C3orf67Q6ZVT6 689 aa9.25□□□□□ -0.93
SMPD3-210ENST00000567811 ZNF428Q96B54 188 aa9.25□□□□□ -0.93
SMPD3-210ENST00000567811 FAM89AQ96GI7 184 aa9.25□□□□□ -0.93
SMPD3-210ENST00000567811 STK31Q9BXU1 1019 aa9.25□□□□□ -0.93
SMPD3-210ENST00000567811 ABCC12Q96J65 1359 aa9.24□□□□□ -0.93
SMPD3-210ENST00000567811 VAMP4O75379 141 aa9.24□□□□□ -0.93
SMPD3-210ENST00000567811 KSR2Q6VAB6 950 aa9.24□□□□□ -0.93
SMPD3-210ENST00000567811 DDX46Q7L014 1031 aaKnown RBP9.24□□□□□ -0.93
SMPD3-210ENST00000567811 SP8Q8IXZ3 490 aa9.24□□□□□ -0.93
SMPD3-210ENST00000567811 CCDC191Q8NCU4 936 aa9.24□□□□□ -0.93
SMPD3-210ENST00000567811 RBM46Q8TBY0 533 aaKnown RBP9.24□□□□□ -0.93
SMPD3-210ENST00000567811 MYD88Q99836 296 aa9.24□□□□□ -0.93
SMPD3-210ENST00000567811 METTL22Q9BUU2 404 aaPredicted RBP9.24□□□□□ -0.93
SMPD3-210ENST00000567811 ZNF277Q9NRM2 450 aaPredicted RBP9.24□□□□□ -0.93
SMPD3-210ENST00000567811 RIC1Q4ADV7 1423 aa9.23□□□□□ -0.93
SMPD3-210ENST00000567811 LAMB2P55268 1798 aa9.23□□□□□ -0.93
SMPD3-210ENST00000567811 POTECB2RU33 542 aa9.23□□□□□ -0.93
SMPD3-210ENST00000567811 DDNO94850 711 aaPredicted RBP9.23□□□□□ -0.93
SMPD3-210ENST00000567811 HSP90B1P14625 803 aaKnown RBP9.23□□□□□ -0.93
SMPD3-210ENST00000567811 HSPA6P17066 643 aa9.23□□□□□ -0.93
SMPD3-210ENST00000567811 IARSP41252 1262 aaKnown RBP9.23□□□□□ -0.93
SMPD3-210ENST00000567811 SF3B3Q15393 1217 aaKnown RBP9.23□□□□□ -0.93
SMPD3-210ENST00000567811 RTL5Q5HYW3 569 aaPredicted RBP9.23□□□□□ -0.93
SMPD3-210ENST00000567811 ZBTB38Q8NAP3 1195 aaPredicted RBP9.23□□□□□ -0.93
SMPD3-210ENST00000567811 JDP2Q8WYK2 163 aa9.23□□□□□ -0.93
SMPD3-210ENST00000567811 PSMD1Q99460 953 aa9.23□□□□□ -0.93
SMPD3-210ENST00000567811 MAP3K2Q9Y2U5 619 aa9.23□□□□□ -0.93
SMPD3-210ENST00000567811 ATP6V0A2Q9Y487 856 aa9.23□□□□□ -0.93
SMPD3-210ENST00000567811 PI4KAP2A4QPH2 592 aa9.22□□□□□ -0.93
SMPD3-210ENST00000567811 IRS4O14654 1257 aaPredicted RBP9.22□□□□□ -0.93
SMPD3-210ENST00000567811 PPEF1O14829 653 aaPredicted RBP9.22□□□□□ -0.93
SMPD3-210ENST00000567811 EXOSC9Q06265 439 aaKnown RBP9.22□□□□□ -0.93
SMPD3-210ENST00000567811 FSTL1Q12841 308 aa9.22□□□□□ -0.93
SMPD3-210ENST00000567811 G2E3Q7L622 706 aa9.22□□□□□ -0.93
SMPD3-210ENST00000567811 MPNDQ8N594 471 aa9.22□□□□□ -0.93
SMPD3-210ENST00000567811 PI4KAP1Q8N8J0 262 aa9.22□□□□□ -0.93
SMPD3-210ENST00000567811 VPS33BQ9H267 617 aa9.22□□□□□ -0.93
SMPD3-210ENST00000567811 MYH16Q9H6N6 1097 aa9.22□□□□□ -0.93
SMPD3-210ENST00000567811 TNRC6CQ9HCJ0 1690 aaKnown RBP9.22□□□□□ -0.93
SMPD3-210ENST00000567811 FZD9O00144 591 aa9.21□□□□□ -0.94
SMPD3-210ENST00000567811 PCCAP05165 728 aaPredicted RBP9.21□□□□□ -0.94
SMPD3-210ENST00000567811 RPS8P62241 208 aaKnown RBP9.21□□□□□ -0.94
SMPD3-210ENST00000567811 NEXNQ0ZGT2 675 aa9.21□□□□□ -0.94
SMPD3-210ENST00000567811 GRAPQ13588 217 aa9.21□□□□□ -0.94
SMPD3-210ENST00000567811 TMC4Q7Z404 712 aa9.21□□□□□ -0.94
SMPD3-210ENST00000567811 SUPT20HQ8NEM7 779 aa9.21□□□□□ -0.94
SMPD3-210ENST00000567811 GRAPLQ8TC17 118 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms