RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 BICC1Q9H694 974 aaKnown RBP21.47■■□□□ 1.03
CMTM3-214ENST00000567572 UBAP1LF5GYI3 381 aa21.46■■□□□ 1.03
CMTM3-214ENST00000567572 ZNF445P59923 1031 aa21.46■■□□□ 1.03
CMTM3-214ENST00000567572 CNTROBQ8N137 903 aa21.46■■□□□ 1.03
CMTM3-214ENST00000567572 SPATA31A5Q5VU36 1347 aa21.46■■□□□ 1.03
CMTM3-214ENST00000567572 SPATA31A7Q8IWB4 1347 aa21.46■■□□□ 1.03
CMTM3-214ENST00000567572 ERC1Q8IUD2 1116 aa21.45■■□□□ 1.02
CMTM3-214ENST00000567572 IL1RAPL2Q9NP60 686 aa21.45■■□□□ 1.02
CMTM3-214ENST00000567572 LMBRD1Q9NUN5 540 aa21.45■■□□□ 1.02
CMTM3-214ENST00000567572 HSPA4P34932 840 aa21.45■■□□□ 1.02
CMTM3-214ENST00000567572 TTLL7Q6ZT98 887 aa21.45■■□□□ 1.02
CMTM3-214ENST00000567572 ZGPATQ8N5A5 531 aaKnown RBP21.45■■□□□ 1.02
CMTM3-214ENST00000567572 TEX13AQ9BXU3 409 aaPredicted RBP21.45■■□□□ 1.02
CMTM3-214ENST00000567572 RAD50Q92878 1312 aa21.44■■□□□ 1.02
CMTM3-214ENST00000567572 MCTP1Q6DN14 999 aa21.44■■□□□ 1.02
CMTM3-214ENST00000567572 GLRX3O76003 335 aaKnown RBP21.43■■□□□ 1.02
CMTM3-214ENST00000567572 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.43■■□□□ 1.02
CMTM3-214ENST00000567572 AK9Q5TCS8 1911 aa21.43■■□□□ 1.02
CMTM3-214ENST00000567572 TJP1Q07157 1748 aa21.43■■□□□ 1.02
CMTM3-214ENST00000567572 SGSM2O43147 1006 aa21.43■■□□□ 1.02
CMTM3-214ENST00000567572 GAS2L3Q86XJ1 694 aa21.43■■□□□ 1.02
CMTM3-214ENST00000567572 UNC5CLQ8IV45 518 aa21.43■■□□□ 1.02
CMTM3-214ENST00000567572 DDB1Q16531 1140 aa21.42■■□□□ 1.02
CMTM3-214ENST00000567572 BARGINQ6ZT62 677 aa21.42■■□□□ 1.02
CMTM3-214ENST00000567572 DNAJC10Q8IXB1 793 aa21.42■■□□□ 1.02
CMTM3-214ENST00000567572 PALD1Q9ULE6 856 aa21.42■■□□□ 1.02
CMTM3-214ENST00000567572 ATP5J2-PTCD1G3V325 749 aa21.41■■□□□ 1.02
CMTM3-214ENST00000567572 CASP7P55210 303 aa21.41■■□□□ 1.02
CMTM3-214ENST00000567572 GPATCH3Q96I76 525 aa21.41■■□□□ 1.02
CMTM3-214ENST00000567572 ARXQ96QS3 562 aa21.41■■□□□ 1.02
CMTM3-214ENST00000567572 ZDHHC9Q9Y397 364 aa21.41■■□□□ 1.02
CMTM3-214ENST00000567572 BRD1O95696 1058 aa21.41■■□□□ 1.02
CMTM3-214ENST00000567572 EPHA10Q5JZY3 1008 aa21.41■■□□□ 1.02
CMTM3-214ENST00000567572 NUTM1Q86Y26 1132 aa21.41■■□□□ 1.02
CMTM3-214ENST00000567572 PA2G4Q9UQ80 394 aaKnown RBP21.41■■□□□ 1.02
CMTM3-214ENST00000567572 JCADQ9P266 1359 aa21.4■■□□□ 1.02
CMTM3-214ENST00000567572 PKP1Q13835 747 aa21.4■■□□□ 1.02
CMTM3-214ENST00000567572 CLASRPQ8N2M8 674 aaKnown RBP21.4■■□□□ 1.02
CMTM3-214ENST00000567572 MBD3O95983 291 aa21.39■■□□□ 1.02
CMTM3-214ENST00000567572 CLCN1P35523 988 aa21.39■■□□□ 1.02
CMTM3-214ENST00000567572 OS9Q13438 667 aaPredicted RBP21.39■■□□□ 1.02
CMTM3-214ENST00000567572 RABL6Q3YEC7 729 aaPredicted RBP21.39■■□□□ 1.02
CMTM3-214ENST00000567572 UBE3BQ7Z3V4 1068 aa21.39■■□□□ 1.02
CMTM3-214ENST00000567572 A0A087WZG4 1122 aa21.39■■□□□ 1.01
CMTM3-214ENST00000567572 STARD3NLO95772 234 aa21.39■■□□□ 1.01
CMTM3-214ENST00000567572 CCDC173Q0VFZ6 552 aa21.39■■□□□ 1.01
CMTM3-214ENST00000567572 RUFY2Q8WXA3 655 aa21.39■■□□□ 1.01
CMTM3-214ENST00000567572 SLC4A9Q96Q91 983 aa21.39■■□□□ 1.01
CMTM3-214ENST00000567572 RRAGDQ9NQL2 400 aaPredicted RBP21.39■■□□□ 1.01
CMTM3-214ENST00000567572 PRIM1P49642 420 aaKnown RBP21.38■■□□□ 1.01
CMTM3-214ENST00000567572 ANP32BQ92688 251 aaKnown RBP21.38■■□□□ 1.01
CMTM3-214ENST00000567572 ZBTB3Q9H5J0 574 aa21.37■■□□□ 1.01
CMTM3-214ENST00000567572 H7C1W4 665 aa21.37■■□□□ 1.01
CMTM3-214ENST00000567572 MARCH10Q8NA82 808 aaPredicted RBP21.37■■□□□ 1.01
CMTM3-214ENST00000567572 SYTL4Q96C24 671 aaPredicted RBP21.37■■□□□ 1.01
CMTM3-214ENST00000567572 PPP1R9BQ96SB3 815 aa21.37■■□□□ 1.01
CMTM3-214ENST00000567572 ECHDC1Q9NTX5 307 aa21.37■■□□□ 1.01
CMTM3-214ENST00000567572 CWC25Q9NXE8 425 aaPredicted RBP21.37■■□□□ 1.01
CMTM3-214ENST00000567572 BCL9LQ86UU0 1499 aa21.36■■□□□ 1.01
CMTM3-214ENST00000567572 KIAA1211Q6ZU35 1233 aa21.36■■□□□ 1.01
CMTM3-214ENST00000567572 LSG1Q9H089 658 aaKnown RBP21.36■■□□□ 1.01
CMTM3-214ENST00000567572 CYP19A1P11511 503 aaPredicted RBP21.35■■□□□ 1.01
CMTM3-214ENST00000567572 NASPP49321 788 aaPredicted RBP21.35■■□□□ 1.01
CMTM3-214ENST00000567572 ZSCAN23Q3MJ62 389 aa21.35■■□□□ 1.01
CMTM3-214ENST00000567572 CCDC191Q8NCU4 936 aa21.35■■□□□ 1.01
CMTM3-214ENST00000567572 JARID2Q92833 1246 aaPredicted RBP21.35■■□□□ 1.01
CMTM3-214ENST00000567572 TRIM44Q96DX7 344 aaPredicted RBP21.35■■□□□ 1.01
CMTM3-214ENST00000567572 SASH1O94885 1247 aa21.35■■□□□ 1.01
CMTM3-214ENST00000567572 RFX5P48382 616 aaPredicted RBP21.35■■□□□ 1.01
CMTM3-214ENST00000567572 HIP1O00291 1037 aa21.34■■□□□ 1.01
CMTM3-214ENST00000567572 G3BP1Q13283 466 aaKnown RBP eCLIP21.34■■□□□ 1.01
CMTM3-214ENST00000567572 ISCA1Q9BUE6 129 aa21.34■■□□□ 1.01
CMTM3-214ENST00000567572 COPRSQ9NQ92 184 aa21.34■■□□□ 1.01
CMTM3-214ENST00000567572 CCDC9Q9Y3X0 531 aaKnown RBP21.34■■□□□ 1.01
CMTM3-214ENST00000567572 WDR33Q9C0J8 1336 aaKnown RBP21.34■■□□□ 1.01
CMTM3-214ENST00000567572 CICQ96RK0 1608 aaPredicted RBP21.34■■□□□ 1.01
CMTM3-214ENST00000567572 CAVIN1Q6NZI2 390 aaKnown RBP21.33■■□□□ 1.01
CMTM3-214ENST00000567572 PRPF40AO75400 957 aaKnown RBP21.33■■□□□ 1
CMTM3-214ENST00000567572 IL25Q9H293 177 aa21.33■■□□□ 1
CMTM3-214ENST00000567572 DIAPH3Q9NSV4 1193 aa21.33■■□□□ 1
CMTM3-214ENST00000567572 FOXO4P98177 505 aa21.32■■□□□ 1
CMTM3-214ENST00000567572 TCIRG1Q13488 830 aa21.32■■□□□ 1
CMTM3-214ENST00000567572 VPS72Q15906 364 aa21.32■■□□□ 1
CMTM3-214ENST00000567572 KIF6Q6ZMV9 814 aa21.32■■□□□ 1
CMTM3-214ENST00000567572 EVI5LQ96CN4 794 aa21.32■■□□□ 1
CMTM3-214ENST00000567572 TTC14Q96N46 770 aa21.32■■□□□ 1
CMTM3-214ENST00000567572 SNX14Q9Y5W7 946 aa21.32■■□□□ 1
CMTM3-214ENST00000567572 KAT6BQ8WYB5 2073 aa21.32■■□□□ 1
CMTM3-214ENST00000567572 IFIT2P09913 472 aaKnown RBP21.31■■□□□ 1
CMTM3-214ENST00000567572 TRIM28Q13263 835 aaKnown RBP21.31■■□□□ 1
CMTM3-214ENST00000567572 KLHDC4Q8TBB5 520 aa21.31■■□□□ 1
CMTM3-214ENST00000567572 KCNB2Q92953 911 aa21.31■■□□□ 1
CMTM3-214ENST00000567572 C8orf37Q96NL8 207 aa21.31■■□□□ 1
CMTM3-214ENST00000567572 ESPNB1AK53 854 aa21.31■■□□□ 1
CMTM3-214ENST00000567572 PTPN12Q05209 780 aaKnown RBP21.31■■□□□ 1
CMTM3-214ENST00000567572 GPT2Q8TD30 523 aa21.31■■□□□ 1
CMTM3-214ENST00000567572 UPF3BQ9BZI7 483 aaKnown RBP21.31■■□□□ 1
CMTM3-214ENST00000567572 TM6SF1Q9BZW5 370 aa21.31■■□□□ 1
CMTM3-214ENST00000567572 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.31■■□□□ 1
CMTM3-214ENST00000567572 KLHL34Q8N239 644 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms