RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 EVA1CP58658 441 aa22.6■■□□□ 1.21
MSLN-207ENST00000566549 PLBD2Q8NHP8 589 aa22.6■■□□□ 1.21
MSLN-207ENST00000566549 CHMP3Q9Y3E7 222 aa22.6■■□□□ 1.21
MSLN-207ENST00000566549 MRE11P49959 708 aa22.59■■□□□ 1.21
MSLN-207ENST00000566549 KLHL40Q2TBA0 621 aa22.59■■□□□ 1.21
MSLN-207ENST00000566549 CASTP20810 708 aaKnown RBP22.59■■□□□ 1.21
MSLN-207ENST00000566549 PTPN12Q05209 780 aaKnown RBP22.59■■□□□ 1.21
MSLN-207ENST00000566549 TFCP2Q12800 502 aa22.59■■□□□ 1.21
MSLN-207ENST00000566549 NMIQ13287 307 aaPredicted RBP22.59■■□□□ 1.21
MSLN-207ENST00000566549 FOXD4L6Q3SYB3 417 aaPredicted RBP22.59■■□□□ 1.21
MSLN-207ENST00000566549 FOXD4L3Q6VB84 417 aaPredicted RBP22.59■■□□□ 1.21
MSLN-207ENST00000566549 EDC3Q96F86 508 aaKnown RBP22.59■■□□□ 1.21
MSLN-207ENST00000566549 FSD1Q9BTV5 496 aa22.59■■□□□ 1.21
MSLN-207ENST00000566549 ZBTB3Q9H5J0 574 aa22.58■■□□□ 1.21
MSLN-207ENST00000566549 CCDC9Q9Y3X0 531 aaKnown RBP22.58■■□□□ 1.21
MSLN-207ENST00000566549 PLEKHG2Q9H7P9 1386 aa22.58■■□□□ 1.2
MSLN-207ENST00000566549 RFX5P48382 616 aaPredicted RBP22.58■■□□□ 1.2
MSLN-207ENST00000566549 AK2P54819 239 aa22.58■■□□□ 1.2
MSLN-207ENST00000566549 NDUFB9Q9Y6M9 179 aa22.58■■□□□ 1.2
MSLN-207ENST00000566549 ADCK5Q3MIX3 580 aa22.57■■□□□ 1.2
MSLN-207ENST00000566549 ZNF330Q9Y3S2 320 aaPredicted RBP22.57■■□□□ 1.2
MSLN-207ENST00000566549 CAVIN1Q6NZI2 390 aaKnown RBP22.57■■□□□ 1.2
MSLN-207ENST00000566549 INTS4Q96HW7 963 aaKnown RBP22.57■■□□□ 1.2
MSLN-207ENST00000566549 COPRSQ9NQ92 184 aa22.57■■□□□ 1.2
MSLN-207ENST00000566549 GLI3P10071 1580 aa22.56■■□□□ 1.2
MSLN-207ENST00000566549 DTNBO60941 627 aa22.56■■□□□ 1.2
MSLN-207ENST00000566549 LMBR1LQ6UX01 489 aa22.56■■□□□ 1.2
MSLN-207ENST00000566549 TTC14Q96N46 770 aa22.56■■□□□ 1.2
MSLN-207ENST00000566549 CARD10Q9BWT7 1032 aa22.56■■□□□ 1.2
MSLN-207ENST00000566549 ERVV-2B6SEH9 535 aa22.56■■□□□ 1.2
MSLN-207ENST00000566549 KCNJ4P48050 445 aa22.56■■□□□ 1.2
MSLN-207ENST00000566549 JAKMIP1Q96N16 626 aaKnown RBP22.56■■□□□ 1.2
MSLN-207ENST00000566549 A0A0D9SFI3 127 aa22.55■■□□□ 1.2
MSLN-207ENST00000566549 BRD1O95696 1058 aa22.55■■□□□ 1.2
MSLN-207ENST00000566549 DBNLQ9UJU6 430 aaKnown RBP22.55■■□□□ 1.2
MSLN-207ENST00000566549 KDM4FA0A1W2PPD8 638 aa22.55■■□□□ 1.2
MSLN-207ENST00000566549 RABL6Q3YEC7 729 aaPredicted RBP22.55■■□□□ 1.2
MSLN-207ENST00000566549 RUFY3Q7L099 469 aa22.55■■□□□ 1.2
MSLN-207ENST00000566549 CCDC171Q6TFL3 1326 aa22.54■■□□□ 1.2
MSLN-207ENST00000566549 CASP7P55210 303 aa22.54■■□□□ 1.2
MSLN-207ENST00000566549 TNNI3KQ59H18 835 aa22.54■■□□□ 1.2
MSLN-207ENST00000566549 FPGT-TNNI3KV9GXZ4 949 aa22.54■■□□□ 1.2
MSLN-207ENST00000566549 RBM8AQ9Y5S9 174 aaKnown RBP22.53■■□□□ 1.2
MSLN-207ENST00000566549 GPT2Q8TD30 523 aa22.52■■□□□ 1.2
MSLN-207ENST00000566549 DBNDD2Q9BQY9 259 aa22.52■■□□□ 1.2
MSLN-207ENST00000566549 RBM27Q9P2N5 1060 aaKnown RBP22.52■■□□□ 1.2
MSLN-207ENST00000566549 STRCQ7RTU9 1775 aa22.52■■□□□ 1.2
MSLN-207ENST00000566549 DNAJC2Q99543 621 aaKnown RBP22.51■■□□□ 1.19
MSLN-207ENST00000566549 LIMCH1Q9UPQ0 1083 aa22.51■■□□□ 1.19
MSLN-207ENST00000566549 PARP4Q9UKK3 1724 aaKnown RBP22.51■■□□□ 1.19
MSLN-207ENST00000566549 ARFGEF2Q9Y6D5 1785 aa22.51■■□□□ 1.19
MSLN-207ENST00000566549 LARGE1O95461 756 aa22.51■■□□□ 1.19
MSLN-207ENST00000566549 CHGBP05060 677 aa22.51■■□□□ 1.19
MSLN-207ENST00000566549 NKX1-1Q15270 411 aaPredicted RBP22.51■■□□□ 1.19
MSLN-207ENST00000566549 CWC25Q9NXE8 425 aaPredicted RBP22.51■■□□□ 1.19
MSLN-207ENST00000566549 HIP1O00291 1037 aa22.5■■□□□ 1.19
MSLN-207ENST00000566549 ZNF589Q86UQ0 364 aaPredicted RBP22.5■■□□□ 1.19
MSLN-207ENST00000566549 PDRG1Q9NUG6 133 aa22.5■■□□□ 1.19
MSLN-207ENST00000566549 ERBB4Q15303 1308 aa22.5■■□□□ 1.19
MSLN-207ENST00000566549 AFDNP55196 1824 aaKnown RBP22.5■■□□□ 1.19
MSLN-207ENST00000566549 FOXO4P98177 505 aa22.5■■□□□ 1.19
MSLN-207ENST00000566549 COL9A3Q14050 684 aaPredicted RBP22.5■■□□□ 1.19
MSLN-207ENST00000566549 NECTIN1Q15223 517 aa22.5■■□□□ 1.19
MSLN-207ENST00000566549 CREB3L3Q68CJ9 461 aa22.5■■□□□ 1.19
MSLN-207ENST00000566549 ISY1Q9ULR0 285 aaKnown RBP22.5■■□□□ 1.19
MSLN-207ENST00000566549 NSFL1CQ9UNZ2 370 aaKnown RBP22.5■■□□□ 1.19
MSLN-207ENST00000566549 KCPQ6ZWJ8 1503 aa22.49■■□□□ 1.19
MSLN-207ENST00000566549 ZKSCAN1P17029 563 aaPredicted RBP22.49■■□□□ 1.19
MSLN-207ENST00000566549 TMOD3Q9NYL9 352 aa22.49■■□□□ 1.19
MSLN-207ENST00000566549 H7C1W4 665 aa22.49■■□□□ 1.19
MSLN-207ENST00000566549 ZSCAN23Q3MJ62 389 aa22.48■■□□□ 1.19
MSLN-207ENST00000566549 MAP4K1Q92918 833 aa22.48■■□□□ 1.19
MSLN-207ENST00000566549 GDPD2Q9HCC8 539 aa22.48■■□□□ 1.19
MSLN-207ENST00000566549 CYP46A1Q9Y6A2 500 aa22.48■■□□□ 1.19
MSLN-207ENST00000566549 BTG4Q9NY30 223 aa22.48■■□□□ 1.19
MSLN-207ENST00000566549 ATP5JP18859 108 aa22.47■■□□□ 1.19
MSLN-207ENST00000566549 CCDC83Q8IWF9 413 aa22.47■■□□□ 1.19
MSLN-207ENST00000566549 ZNF594Q96JF6 807 aaPredicted RBP22.47■■□□□ 1.19
MSLN-207ENST00000566549 NEUROD6Q96NK8 337 aa22.47■■□□□ 1.19
MSLN-207ENST00000566549 TAF6LQ9Y6J9 622 aa22.47■■□□□ 1.19
MSLN-207ENST00000566549 LAMB4A4D0S4 1761 aa22.47■■□□□ 1.19
MSLN-207ENST00000566549 TCEANC2Q96MN5 208 aa22.47■■□□□ 1.19
MSLN-207ENST00000566549 ASAP1Q9ULH1 1129 aa22.47■■□□□ 1.19
MSLN-207ENST00000566549 SLC27A2O14975 620 aa22.46■■□□□ 1.19
MSLN-207ENST00000566549 DDX46Q7L014 1031 aaKnown RBP22.46■■□□□ 1.19
MSLN-207ENST00000566549 ZSWIM6Q9HCJ5 1215 aa22.46■■□□□ 1.19
MSLN-207ENST00000566549 RPAP1Q9BWH6 1393 aaPredicted RBP22.46■■□□□ 1.19
MSLN-207ENST00000566549 COL15A1P39059 1388 aa22.45■■□□□ 1.18
MSLN-207ENST00000566549 VPS53Q5VIR6 699 aa22.45■■□□□ 1.18
MSLN-207ENST00000566549 WDR33Q9C0J8 1336 aaKnown RBP22.45■■□□□ 1.18
MSLN-207ENST00000566549 CCDC129Q6ZRS4 1044 aa22.45■■□□□ 1.18
MSLN-207ENST00000566549 KCNB2Q92953 911 aa22.45■■□□□ 1.18
MSLN-207ENST00000566549 SMC3Q9UQE7 1217 aa22.45■■□□□ 1.18
MSLN-207ENST00000566549 MED23Q9ULK4 1368 aa22.44■■□□□ 1.18
MSLN-207ENST00000566549 TPRNQ4KMQ1 711 aa22.44■■□□□ 1.18
MSLN-207ENST00000566549 LRRC24Q50LG9 513 aa22.44■■□□□ 1.18
MSLN-207ENST00000566549 ATG9AQ7Z3C6 839 aa22.44■■□□□ 1.18
MSLN-207ENST00000566549 PIGBQ92521 554 aa22.44■■□□□ 1.18
MSLN-207ENST00000566549 CCDC85AQ96PX6 553 aaPredicted RBP22.44■■□□□ 1.18
MSLN-207ENST00000566549 SEC62Q99442 399 aaKnown RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms