RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 MEIS3Q99687 375 aa15.76■□□□□ 0.11
NSMCE1-208ENST00000565070 SRCIN1Q9C0H9 1055 aa15.76■□□□□ 0.11
NSMCE1-208ENST00000565070 AFDNP55196 1824 aaKnown RBP15.76■□□□□ 0.11
NSMCE1-208ENST00000565070 ALDH1L1O75891 902 aa15.76■□□□□ 0.11
NSMCE1-208ENST00000565070 TCIRG1Q13488 830 aa15.76■□□□□ 0.11
NSMCE1-208ENST00000565070 AMIGO3Q86WK7 504 aa15.76■□□□□ 0.11
NSMCE1-208ENST00000565070 BEND3Q5T5X7 828 aa15.75■□□□□ 0.11
NSMCE1-208ENST00000565070 CEP85Q6P2H3 762 aa15.75■□□□□ 0.11
NSMCE1-208ENST00000565070 MYD88Q99836 296 aa15.75■□□□□ 0.11
NSMCE1-208ENST00000565070 DCTPP1Q9H773 170 aa15.75■□□□□ 0.11
NSMCE1-208ENST00000565070 PNPLA7Q6ZV29 1317 aa15.74■□□□□ 0.11
NSMCE1-208ENST00000565070 USPL1Q5W0Q7 1092 aa15.74■□□□□ 0.11
NSMCE1-208ENST00000565070 ANP32EQ9BTT0 268 aa15.74■□□□□ 0.11
NSMCE1-208ENST00000565070 ZBTB47Q9UFB7 747 aaPredicted RBP15.74■□□□□ 0.11
NSMCE1-208ENST00000565070 TRIM28Q13263 835 aaKnown RBP15.74■□□□□ 0.11
NSMCE1-208ENST00000565070 DDRGK1Q96HY6 314 aa15.74■□□□□ 0.11
NSMCE1-208ENST00000565070 LNPKQ9C0E8 428 aa15.74■□□□□ 0.11
NSMCE1-208ENST00000565070 HLFQ16534 295 aa15.73■□□□□ 0.11
NSMCE1-208ENST00000565070 ANKRD45Q5TZF3 282 aa15.73■□□□□ 0.11
NSMCE1-208ENST00000565070 COL23A1Q86Y22 540 aaPredicted RBP15.73■□□□□ 0.11
NSMCE1-208ENST00000565070 CCDC191Q8NCU4 936 aa15.73■□□□□ 0.11
NSMCE1-208ENST00000565070 NEURL1BA8MQ27 555 aa15.72■□□□□ 0.11
NSMCE1-208ENST00000565070 SEC24BO95487 1268 aa15.72■□□□□ 0.11
NSMCE1-208ENST00000565070 PARP10Q53GL7 1025 aa15.72■□□□□ 0.11
NSMCE1-208ENST00000565070 SMIM5Q71RC9 77 aa15.72■□□□□ 0.11
NSMCE1-208ENST00000565070 ISCA1Q9BUE6 129 aa15.72■□□□□ 0.11
NSMCE1-208ENST00000565070 SRP68Q9UHB9 627 aaKnown RBP15.72■□□□□ 0.11
NSMCE1-208ENST00000565070 ERICH6Q7L0X2 663 aa15.71■□□□□ 0.11
NSMCE1-208ENST00000565070 ZNF34Q8IZ26 560 aa15.71■□□□□ 0.11
NSMCE1-208ENST00000565070 CWC25Q9NXE8 425 aaPredicted RBP15.71■□□□□ 0.11
NSMCE1-208ENST00000565070 HDAC5Q9UQL6 1122 aa15.71■□□□□ 0.11
NSMCE1-208ENST00000565070 IGKV5-2P06315 115 aa15.71■□□□□ 0.11
NSMCE1-208ENST00000565070 GYS1P13807 737 aa15.71■□□□□ 0.11
NSMCE1-208ENST00000565070 NLGN1Q8N2Q7 840 aa15.71■□□□□ 0.11
NSMCE1-208ENST00000565070 ATP5J2-PTCD1G3V325 749 aa15.7■□□□□ 0.1
NSMCE1-208ENST00000565070 GCKRQ14397 625 aa15.7■□□□□ 0.1
NSMCE1-208ENST00000565070 CWF19L2Q2TBE0 894 aaKnown RBP15.7■□□□□ 0.1
NSMCE1-208ENST00000565070 SLC16A10Q8TF71 515 aa15.7■□□□□ 0.1
NSMCE1-208ENST00000565070 USP44Q9H0E7 712 aa15.7■□□□□ 0.1
NSMCE1-208ENST00000565070 BCL2L12Q9HB09 334 aa15.7■□□□□ 0.1
NSMCE1-208ENST00000565070 NIP7Q9Y221 180 aaKnown RBP eCLIP15.7■□□□□ 0.1
NSMCE1-208ENST00000565070 GNAI2P04899 355 aa15.69■□□□□ 0.1
NSMCE1-208ENST00000565070 GNAI3P08754 354 aa15.69■□□□□ 0.1
NSMCE1-208ENST00000565070 PPP1R42Q7Z4L9 355 aa15.69■□□□□ 0.1
NSMCE1-208ENST00000565070 SETDB2Q96T68 719 aa15.69■□□□□ 0.1
NSMCE1-208ENST00000565070 C9orf78Q9NZ63 289 aaPredicted RBP15.69■□□□□ 0.1
NSMCE1-208ENST00000565070 COL24A1Q17RW2 1714 aa15.69■□□□□ 0.1
NSMCE1-208ENST00000565070 BMP2KLQ5H9B9 411 aa15.69■□□□□ 0.1
NSMCE1-208ENST00000565070 NLRP10Q86W26 655 aa15.69■□□□□ 0.1
NSMCE1-208ENST00000565070 CARMIL3Q8ND23 1372 aa15.68■□□□□ 0.1
NSMCE1-208ENST00000565070 GRM8O00222 908 aa15.68■□□□□ 0.1
NSMCE1-208ENST00000565070 HMMRO75330 724 aa15.68■□□□□ 0.1
NSMCE1-208ENST00000565070 GPTP24298 496 aa15.68■□□□□ 0.1
NSMCE1-208ENST00000565070 TBC1D9BQ66K14 1250 aa15.67■□□□□ 0.1
NSMCE1-208ENST00000565070 NYXQ9GZU5 481 aa15.67■□□□□ 0.1
NSMCE1-208ENST00000565070 UBTFL1P0CB47 393 aaPredicted RBP15.67■□□□□ 0.1
NSMCE1-208ENST00000565070 HSP90B1P14625 803 aaKnown RBP15.67■□□□□ 0.1
NSMCE1-208ENST00000565070 UTP14AQ9BVJ6 771 aaKnown RBP15.67■□□□□ 0.1
NSMCE1-208ENST00000565070 UTYO14607 1347 aa15.66■□□□□ 0.1
NSMCE1-208ENST00000565070 UBN2Q6ZU65 1347 aa15.66■□□□□ 0.1
NSMCE1-208ENST00000565070 PCCAP05165 728 aaPredicted RBP15.66■□□□□ 0.1
NSMCE1-208ENST00000565070 BICDL1Q6ZP65 573 aa15.66■□□□□ 0.1
NSMCE1-208ENST00000565070 ZBTB38Q8NAP3 1195 aaPredicted RBP15.66■□□□□ 0.1
NSMCE1-208ENST00000565070 UPF2Q9HAU5 1272 aaKnown RBP15.66■□□□□ 0.1
NSMCE1-208ENST00000565070 CASZ1Q86V15 1759 aa15.66■□□□□ 0.1
NSMCE1-208ENST00000565070 NBPF7P0C2Y1 421 aaPredicted RBP15.65■□□□□ 0.1
NSMCE1-208ENST00000565070 NFIXQ14938 502 aa15.65■□□□□ 0.1
NSMCE1-208ENST00000565070 TRMT112Q9UI30 125 aaKnown RBP15.65■□□□□ 0.1
NSMCE1-208ENST00000565070 H7C1W4 665 aa15.65■□□□□ 0.1
NSMCE1-208ENST00000565070 TM4SF1P30408 202 aa15.65■□□□□ 0.1
NSMCE1-208ENST00000565070 R3HDM1Q15032 1099 aaKnown RBP15.65■□□□□ 0.1
NSMCE1-208ENST00000565070 TPTE2Q6XPS3 522 aa15.65■□□□□ 0.1
NSMCE1-208ENST00000565070 NBPF5PQ86XG9 351 aaPredicted RBP15.65■□□□□ 0.1
NSMCE1-208ENST00000565070 TBC1D32Q96NH3 1257 aa15.65■□□□□ 0.1
NSMCE1-208ENST00000565070 SH3TC1Q8TE82 1336 aa15.65■□□□□ 0.1
NSMCE1-208ENST00000565070 SUSD4Q5VX71 490 aa15.64■□□□□ 0.09
NSMCE1-208ENST00000565070 UBE3BQ7Z3V4 1068 aa15.64■□□□□ 0.09
NSMCE1-208ENST00000565070 CDHR2Q9BYE9 1310 aa15.64■□□□□ 0.09
NSMCE1-208ENST00000565070 SOCS7O14512 581 aa15.63■□□□□ 0.09
NSMCE1-208ENST00000565070 NTSR2O95665 410 aa15.63■□□□□ 0.09
NSMCE1-208ENST00000565070 ATP8B2P98198 1209 aa15.63■□□□□ 0.09
NSMCE1-208ENST00000565070 PLEKHM2Q8IWE5 1019 aa15.63■□□□□ 0.09
NSMCE1-208ENST00000565070 LAMB2P55268 1798 aa15.63■□□□□ 0.09
NSMCE1-208ENST00000565070 NPHP1O15259 732 aa15.63■□□□□ 0.09
NSMCE1-208ENST00000565070 GTF2E1P29083 439 aaPredicted RBP15.63■□□□□ 0.09
NSMCE1-208ENST00000565070 LRRFIP2Q9Y608 721 aaKnown RBP15.63■□□□□ 0.09
NSMCE1-208ENST00000565070 PARP3Q9Y6F1 533 aa15.62■□□□□ 0.09
NSMCE1-208ENST00000565070 MYH3P11055 1940 aa15.62■□□□□ 0.09
NSMCE1-208ENST00000565070 PNMA6EA0A0J9YXQ4 647 aa15.61■□□□□ 0.09
NSMCE1-208ENST00000565070 POLRMTO00411 1230 aaKnown RBP15.61■□□□□ 0.09
NSMCE1-208ENST00000565070 SERPINB2P05120 415 aa15.61■□□□□ 0.09
NSMCE1-208ENST00000565070 MMP10P09238 476 aa15.61■□□□□ 0.09
NSMCE1-208ENST00000565070 CASP7P55210 303 aa15.61■□□□□ 0.09
NSMCE1-208ENST00000565070 MSL1Q68DK7 614 aa15.61■□□□□ 0.09
NSMCE1-208ENST00000565070 CNBD1Q8NA66 436 aa15.61■□□□□ 0.09
NSMCE1-208ENST00000565070 FAM89AQ96GI7 184 aa15.61■□□□□ 0.09
NSMCE1-208ENST00000565070 KAZALD1Q96I82 304 aa15.61■□□□□ 0.09
NSMCE1-208ENST00000565070 MTFR1LQ9H019 292 aa15.61■□□□□ 0.09
NSMCE1-208ENST00000565070 FAM177BA6PVY3 158 aa15.61■□□□□ 0.09
NSMCE1-208ENST00000565070 PLA2G12BQ9BX93 195 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms