RNA–Protein interactions for RNA: ENST00000564470.1

ATP2A1-207, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2A1, Length 467 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-207ENST00000564470 SHROOM2Q13796 1616 aa6.28□□□□□ -1.4
ATP2A1-207ENST00000564470 CCDC88BA6NC98 1476 aa6.28□□□□□ -1.4
ATP2A1-207ENST00000564470 SFI1A8K8P3 1242 aa6.27□□□□□ -1.41
ATP2A1-207ENST00000564470 K7ELQ4 463 aaPredicted RBP6.27□□□□□ -1.41
ATP2A1-207ENST00000564470 CLDN10P78369 228 aa6.27□□□□□ -1.41
ATP2A1-207ENST00000564470 CD163Q86VB7 1156 aa6.27□□□□□ -1.41
ATP2A1-207ENST00000564470 PLEKHM2Q8IWE5 1019 aa6.27□□□□□ -1.41
ATP2A1-207ENST00000564470 C7orf43Q8WVR3 580 aa6.27□□□□□ -1.41
ATP2A1-207ENST00000564470 PLVAPQ9BX97 442 aa6.27□□□□□ -1.41
ATP2A1-207ENST00000564470 TSPAN10Q9H1Z9 355 aaPredicted RBP6.27□□□□□ -1.41
ATP2A1-207ENST00000564470 KIAA1024Q9UPX6 916 aa6.27□□□□□ -1.41
ATP2A1-207ENST00000564470 ABCA5Q8WWZ7 1642 aa6.26□□□□□ -1.41
ATP2A1-207ENST00000564470 ELOA3CA0A087WX78 387 aaPredicted RBP6.26□□□□□ -1.41
ATP2A1-207ENST00000564470 PALM3A6NDB9 673 aaPredicted RBP6.26□□□□□ -1.41
ATP2A1-207ENST00000564470 ELOA3DA6NLF2 546 aaPredicted RBP6.26□□□□□ -1.41
ATP2A1-207ENST00000564470 ELOA3BQ3SY89 546 aa6.26□□□□□ -1.41
ATP2A1-207ENST00000564470 LARGE2Q8N3Y3 721 aa6.26□□□□□ -1.41
ATP2A1-207ENST00000564470 ELOA3Q8NG57 546 aa6.26□□□□□ -1.41
ATP2A1-207ENST00000564470 CEP63Q96MT8 703 aa6.26□□□□□ -1.41
ATP2A1-207ENST00000564470 ANKIB1Q9P2G1 1089 aa6.26□□□□□ -1.41
ATP2A1-207ENST00000564470 GRIN2AQ12879 1464 aa6.26□□□□□ -1.41
ATP2A1-207ENST00000564470 TSPOAP1O95153 1857 aa6.26□□□□□ -1.41
ATP2A1-207ENST00000564470 PSMA6P60900 246 aaKnown RBP6.25□□□□□ -1.41
ATP2A1-207ENST00000564470 C1orf53Q5VUE5 145 aa6.25□□□□□ -1.41
ATP2A1-207ENST00000564470 FBXO41Q8TF61 875 aa6.25□□□□□ -1.41
ATP2A1-207ENST00000564470 TRIM11Q96F44 468 aa6.25□□□□□ -1.41
ATP2A1-207ENST00000564470 ZNF594Q96JF6 807 aaPredicted RBP6.25□□□□□ -1.41
ATP2A1-207ENST00000564470 UCN2Q96RP3 112 aa6.25□□□□□ -1.41
ATP2A1-207ENST00000564470 SLC30A3Q99726 388 aa6.25□□□□□ -1.41
ATP2A1-207ENST00000564470 PHACTR1Q9C0D0 580 aa6.25□□□□□ -1.41
ATP2A1-207ENST00000564470 GPC6Q9Y625 555 aaPredicted RBP6.25□□□□□ -1.41
ATP2A1-207ENST00000564470 ADGRL1O94910 1474 aa6.25□□□□□ -1.41
ATP2A1-207ENST00000564470 ADAMTS12P58397 1594 aa6.25□□□□□ -1.41
ATP2A1-207ENST00000564470 PPP1R12BO60237 982 aaPredicted RBP6.24□□□□□ -1.41
ATP2A1-207ENST00000564470 CHRNA4P43681 627 aa6.24□□□□□ -1.41
ATP2A1-207ENST00000564470 FAM69CQ0P6D2 419 aa6.24□□□□□ -1.41
ATP2A1-207ENST00000564470 NEUROD1Q13562 356 aa6.24□□□□□ -1.41
ATP2A1-207ENST00000564470 TSEN2Q8NCE0 465 aaKnown RBP6.24□□□□□ -1.41
ATP2A1-207ENST00000564470 TFIP11Q9UBB9 837 aaKnown RBP6.24□□□□□ -1.41
ATP2A1-207ENST00000564470 ATAD2Q6PL18 1390 aa6.23□□□□□ -1.41
ATP2A1-207ENST00000564470 M0R2N6 131 aa6.23□□□□□ -1.41
ATP2A1-207ENST00000564470 SIN3BO75182 1162 aa6.23□□□□□ -1.41
ATP2A1-207ENST00000564470 RASA1P20936 1047 aa6.23□□□□□ -1.41
ATP2A1-207ENST00000564470 SPEM2Q0P670 501 aa6.23□□□□□ -1.41
ATP2A1-207ENST00000564470 RAB44Q7Z6P3 723 aaPredicted RBP6.23□□□□□ -1.41
ATP2A1-207ENST00000564470 ZNF280CQ8ND82 737 aa6.23□□□□□ -1.41
ATP2A1-207ENST00000564470 CLUAP1Q96AJ1 413 aa6.23□□□□□ -1.41
ATP2A1-207ENST00000564470 HSH2DQ96JZ2 352 aa6.23□□□□□ -1.41
ATP2A1-207ENST00000564470 BRD7Q9NPI1 651 aa6.23□□□□□ -1.41
ATP2A1-207ENST00000564470 KCNH4Q9UQ05 1017 aa6.23□□□□□ -1.41
ATP2A1-207ENST00000564470 TOP2BQ02880 1626 aa6.23□□□□□ -1.41
ATP2A1-207ENST00000564470 NUP160Q12769 1436 aa6.23□□□□□ -1.41
ATP2A1-207ENST00000564470 LMTK3Q96Q04 1460 aa6.22□□□□□ -1.41
ATP2A1-207ENST00000564470 ABCA10Q8WWZ4 1543 aa6.22□□□□□ -1.41
ATP2A1-207ENST00000564470 SPDYE3A6NKU9 549 aa6.22□□□□□ -1.41
ATP2A1-207ENST00000564470 RANGAP1P46060 587 aaPredicted RBP6.22□□□□□ -1.41
ATP2A1-207ENST00000564470 DOC2BQ14184 412 aa6.22□□□□□ -1.41
ATP2A1-207ENST00000564470 SUSD3Q96L08 255 aa6.22□□□□□ -1.41
ATP2A1-207ENST00000564470 HINFPQ9BQA5 517 aa6.22□□□□□ -1.41
ATP2A1-207ENST00000564470 GTF3C3Q9Y5Q9 886 aa6.22□□□□□ -1.41
ATP2A1-207ENST00000564470 ADARB2-AS1A8MUL3 147 aa6.21□□□□□ -1.42
ATP2A1-207ENST00000564470 M0R082 166 aa6.21□□□□□ -1.42
ATP2A1-207ENST00000564470 SPATA31C1P0DKV0 1188 aa6.21□□□□□ -1.42
ATP2A1-207ENST00000564470 GATA4P43694 442 aa6.21□□□□□ -1.42
ATP2A1-207ENST00000564470 HIRAP54198 1017 aaPredicted RBP6.21□□□□□ -1.42
ATP2A1-207ENST00000564470 PRRT3Q5FWE3 981 aa6.21□□□□□ -1.42
ATP2A1-207ENST00000564470 LARP1Q6PKG0 1096 aaKnown RBP6.21□□□□□ -1.42
ATP2A1-207ENST00000564470 ALDH16A1Q8IZ83 802 aa6.21□□□□□ -1.42
ATP2A1-207ENST00000564470 SIX5Q8N196 739 aa6.21□□□□□ -1.42
ATP2A1-207ENST00000564470 ZNF417Q8TAU3 575 aa6.21□□□□□ -1.42
ATP2A1-207ENST00000564470 SCG3Q8WXD2 468 aaKnown RBP6.21□□□□□ -1.42
ATP2A1-207ENST00000564470 GLMNQ92990 594 aa6.21□□□□□ -1.42
ATP2A1-207ENST00000564470 NGLY1Q96IV0 654 aa6.21□□□□□ -1.42
ATP2A1-207ENST00000564470 ZNF587Q96SQ5 575 aaPredicted RBP6.21□□□□□ -1.42
ATP2A1-207ENST00000564470 IGFLR1Q9H665 355 aa6.21□□□□□ -1.42
ATP2A1-207ENST00000564470 C21orf2O43822 256 aa6.2□□□□□ -1.42
ATP2A1-207ENST00000564470 APBA3O96018 575 aa6.2□□□□□ -1.42
ATP2A1-207ENST00000564470 ADH7P40394 386 aa6.2□□□□□ -1.42
ATP2A1-207ENST00000564470 SEC13P55735 322 aa6.2□□□□□ -1.42
ATP2A1-207ENST00000564470 TBC1D8BQ0IIM8 1120 aa6.2□□□□□ -1.42
ATP2A1-207ENST00000564470 TRIM28Q13263 835 aaKnown RBP6.2□□□□□ -1.42
ATP2A1-207ENST00000564470 C8orf86Q6ZUL3 223 aa6.2□□□□□ -1.42
ATP2A1-207ENST00000564470 MICALL1Q8N3F8 863 aa6.2□□□□□ -1.42
ATP2A1-207ENST00000564470 BHMTQ93088 406 aa6.2□□□□□ -1.42
ATP2A1-207ENST00000564470 STARD13Q9Y3M8 1113 aa6.2□□□□□ -1.42
ATP2A1-207ENST00000564470 CUX1P39880 1505 aa6.2□□□□□ -1.42
ATP2A1-207ENST00000564470 FHAD1B1AJZ9 1412 aa6.19□□□□□ -1.42
ATP2A1-207ENST00000564470 LGR5O75473 907 aa6.19□□□□□ -1.42
ATP2A1-207ENST00000564470 DKK1O94907 266 aa6.19□□□□□ -1.42
ATP2A1-207ENST00000564470 PROSER2Q86WR7 435 aaPredicted RBP6.19□□□□□ -1.42
ATP2A1-207ENST00000564470 GAS2L2Q8NHY3 880 aa6.19□□□□□ -1.42
ATP2A1-207ENST00000564470 TNFRSF25Q93038 417 aa6.19□□□□□ -1.42
ATP2A1-207ENST00000564470 MDFIQ99750 246 aa6.19□□□□□ -1.42
ATP2A1-207ENST00000564470 SEMA6BQ9H3T3 888 aa6.19□□□□□ -1.42
ATP2A1-207ENST00000564470 ADCY10Q96PN6 1610 aa6.18□□□□□ -1.42
ATP2A1-207ENST00000564470 PRG4Q92954 1404 aaPredicted RBP6.18□□□□□ -1.42
ATP2A1-207ENST00000564470 FAM229AH3BQW9 127 aa6.18□□□□□ -1.42
ATP2A1-207ENST00000564470 ALBP02768 609 aa6.18□□□□□ -1.42
ATP2A1-207ENST00000564470 KCNQ4P56696 695 aa6.18□□□□□ -1.42
ATP2A1-207ENST00000564470 TYRO3Q06418 890 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms