RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 GLI2P10070 1586 aa14.5□□□□□ -0.09
SCAMP2-204ENST00000563829 LMAN1P49257 510 aa14.49□□□□□ -0.09
SCAMP2-204ENST00000563829 VPS53Q5VIR6 699 aa14.49□□□□□ -0.09
SCAMP2-204ENST00000563829 SARM1Q6SZW1 724 aa14.49□□□□□ -0.09
SCAMP2-204ENST00000563829 PRAM1Q96QH2 718 aa14.49□□□□□ -0.09
SCAMP2-204ENST00000563829 ORC3Q9UBD5 711 aaPredicted RBP14.49□□□□□ -0.09
SCAMP2-204ENST00000563829 TPCN1Q9ULQ1 816 aa14.49□□□□□ -0.09
SCAMP2-204ENST00000563829 RRS1Q15050 365 aaKnown RBP14.49□□□□□ -0.09
SCAMP2-204ENST00000563829 ERCC4Q92889 916 aaPredicted RBP14.49□□□□□ -0.09
SCAMP2-204ENST00000563829 CWC15Q9P013 229 aaKnown RBP14.49□□□□□ -0.09
SCAMP2-204ENST00000563829 DNAI1Q9UI46 699 aa14.49□□□□□ -0.09
SCAMP2-204ENST00000563829 LARP1Q6PKG0 1096 aaKnown RBP14.48□□□□□ -0.09
SCAMP2-204ENST00000563829 CAMSAP1Q5T5Y3 1602 aa14.48□□□□□ -0.09
SCAMP2-204ENST00000563829 ATP8B2P98198 1209 aa14.48□□□□□ -0.09
SCAMP2-204ENST00000563829 PTH1RQ03431 593 aa14.48□□□□□ -0.09
SCAMP2-204ENST00000563829 STK3Q13188 491 aa14.48□□□□□ -0.09
SCAMP2-204ENST00000563829 SMC1AQ14683 1233 aaKnown RBP14.48□□□□□ -0.09
SCAMP2-204ENST00000563829 CCDC93Q567U6 631 aa14.48□□□□□ -0.09
SCAMP2-204ENST00000563829 NECTIN2Q92692 538 aa14.48□□□□□ -0.09
SCAMP2-204ENST00000563829 EPB41L2O43491 1005 aaKnown RBP14.48□□□□□ -0.09
SCAMP2-204ENST00000563829 SASH3O75995 380 aa14.48□□□□□ -0.09
SCAMP2-204ENST00000563829 CD163L1Q9NR16 1453 aa14.48□□□□□ -0.09
SCAMP2-204ENST00000563829 URI1O94763 535 aaPredicted RBP14.47□□□□□ -0.09
SCAMP2-204ENST00000563829 ZRANB1Q9UGI0 708 aa14.47□□□□□ -0.09
SCAMP2-204ENST00000563829 RRP15Q9Y3B9 282 aaKnown RBP14.47□□□□□ -0.09
SCAMP2-204ENST00000563829 CHL1O00533 1208 aa14.47□□□□□ -0.09
SCAMP2-204ENST00000563829 PDCP20941 246 aa14.47□□□□□ -0.09
SCAMP2-204ENST00000563829 GGT6Q6P531 493 aa14.47□□□□□ -0.09
SCAMP2-204ENST00000563829 CNTROBQ8N137 903 aa14.47□□□□□ -0.09
SCAMP2-204ENST00000563829 DDX11Q96FC9 970 aa14.47□□□□□ -0.09
SCAMP2-204ENST00000563829 PPP6R1Q9UPN7 881 aa14.47□□□□□ -0.09
SCAMP2-204ENST00000563829 ADGRB3O60242 1522 aa14.47□□□□□ -0.09
SCAMP2-204ENST00000563829 SURF6O75683 361 aaKnown RBP14.46□□□□□ -0.09
SCAMP2-204ENST00000563829 GNL2Q13823 731 aaKnown RBP14.46□□□□□ -0.09
SCAMP2-204ENST00000563829 COL9A3Q14050 684 aaPredicted RBP14.46□□□□□ -0.09
SCAMP2-204ENST00000563829 ICE2Q659A1 982 aa14.46□□□□□ -0.09
SCAMP2-204ENST00000563829 AOPEPQ8N6M6 819 aa14.46□□□□□ -0.09
SCAMP2-204ENST00000563829 CDK19Q9BWU1 502 aa14.46□□□□□ -0.09
SCAMP2-204ENST00000563829 TTC21BQ7Z4L5 1316 aa14.46□□□□□ -0.09
SCAMP2-204ENST00000563829 CAVIN2O95810 425 aa14.46□□□□□ -0.09
SCAMP2-204ENST00000563829 STX1AQ16623 288 aa14.46□□□□□ -0.09
SCAMP2-204ENST00000563829 SRLQ86TD4 932 aa14.46□□□□□ -0.09
SCAMP2-204ENST00000563829 CARD6Q9BX69 1037 aa14.46□□□□□ -0.09
SCAMP2-204ENST00000563829 GNAI3P08754 354 aa14.46□□□□□ -0.1
SCAMP2-204ENST00000563829 FAM177A1Q8N128 213 aaPredicted RBP14.46□□□□□ -0.1
SCAMP2-204ENST00000563829 AK7Q96M32 723 aa14.46□□□□□ -0.1
SCAMP2-204ENST00000563829 ABCC3O15438 1527 aa14.45□□□□□ -0.1
SCAMP2-204ENST00000563829 CDC42BPGQ6DT37 1551 aa14.45□□□□□ -0.1
SCAMP2-204ENST00000563829 DLG5Q8TDM6 1919 aa14.45□□□□□ -0.1
SCAMP2-204ENST00000563829 RAB11FIP3O75154 756 aa14.45□□□□□ -0.1
SCAMP2-204ENST00000563829 SMC2O95347 1197 aa14.45□□□□□ -0.1
SCAMP2-204ENST00000563829 IFIT2P09913 472 aaKnown RBP14.45□□□□□ -0.1
SCAMP2-204ENST00000563829 GSDMDP57764 484 aa14.45□□□□□ -0.1
SCAMP2-204ENST00000563829 PI4K2BQ8TCG2 481 aa14.45□□□□□ -0.1
SCAMP2-204ENST00000563829 YY1AP1Q9H869 796 aa14.45□□□□□ -0.1
SCAMP2-204ENST00000563829 ZSWIM6Q9HCJ5 1215 aa14.45□□□□□ -0.1
SCAMP2-204ENST00000563829 GEMIN8Q9NWZ8 242 aaKnown RBP14.45□□□□□ -0.1
SCAMP2-204ENST00000563829 FANCAO15360 1455 aa14.45□□□□□ -0.1
SCAMP2-204ENST00000563829 ARHGEF28Q8N1W1 1705 aaKnown RBP14.45□□□□□ -0.1
SCAMP2-204ENST00000563829 TBC1D8O95759 1140 aa14.45□□□□□ -0.1
SCAMP2-204ENST00000563829 TMC6Q7Z403 805 aa14.45□□□□□ -0.1
SCAMP2-204ENST00000563829 DHX40Q8IX18 779 aaKnown RBP14.45□□□□□ -0.1
SCAMP2-204ENST00000563829 AATKQ6ZMQ8 1374 aa14.45□□□□□ -0.1
SCAMP2-204ENST00000563829 CPSF1Q10570 1443 aaKnown RBP14.45□□□□□ -0.1
SCAMP2-204ENST00000563829 SOX12O15370 315 aa14.44□□□□□ -0.1
SCAMP2-204ENST00000563829 GOLGA6L1Q8N7Z2 621 aa14.44□□□□□ -0.1
SCAMP2-204ENST00000563829 FBXO18Q8NFZ0 1043 aa14.44□□□□□ -0.1
SCAMP2-204ENST00000563829 ADAM21Q9UKJ8 722 aa14.44□□□□□ -0.1
SCAMP2-204ENST00000563829 EFCAB6Q5THR3 1501 aa14.44□□□□□ -0.1
SCAMP2-204ENST00000563829 SFPQP23246 707 aaKnown RBP eCLIP14.44□□□□□ -0.1
SCAMP2-204ENST00000563829 SULT6B1Q6IMI4 303 aa14.44□□□□□ -0.1
SCAMP2-204ENST00000563829 REXO1L1PQ8IX06 675 aa14.44□□□□□ -0.1
SCAMP2-204ENST00000563829 GOLGA5Q8TBA6 731 aa14.44□□□□□ -0.1
SCAMP2-204ENST00000563829 ZKSCAN1P17029 563 aaPredicted RBP14.44□□□□□ -0.1
SCAMP2-204ENST00000563829 EVCP57679 992 aa14.44□□□□□ -0.1
SCAMP2-204ENST00000563829 NME9Q86XW9 330 aa14.44□□□□□ -0.1
SCAMP2-204ENST00000563829 DRC1Q96MC2 740 aa14.44□□□□□ -0.1
SCAMP2-204ENST00000563829 FMNL2Q96PY5 1086 aa14.44□□□□□ -0.1
SCAMP2-204ENST00000563829 CHRM1P11229 460 aaPredicted RBP14.43□□□□□ -0.1
SCAMP2-204ENST00000563829 ETF1P62495 437 aaKnown RBP14.43□□□□□ -0.1
SCAMP2-204ENST00000563829 ARMCX5Q6P1M9 558 aa14.43□□□□□ -0.1
SCAMP2-204ENST00000563829 NBPF11Q86T75 865 aa14.43□□□□□ -0.1
SCAMP2-204ENST00000563829 GPATCH11Q8N954 259 aa14.43□□□□□ -0.1
SCAMP2-204ENST00000563829 ATG3Q9NT62 314 aa14.43□□□□□ -0.1
SCAMP2-204ENST00000563829 RPGRIP1LQ68CZ1 1315 aa14.43□□□□□ -0.1
SCAMP2-204ENST00000563829 TUBGCP6Q96RT7 1819 aa14.43□□□□□ -0.1
SCAMP2-204ENST00000563829 PPLO60437 1756 aa14.43□□□□□ -0.1
SCAMP2-204ENST00000563829 YTHDC2Q9H6S0 1430 aaKnown RBP14.43□□□□□ -0.1
SCAMP2-204ENST00000563829 ANKRD26Q9UPS8 1709 aa14.43□□□□□ -0.1
SCAMP2-204ENST00000563829 FOSBP53539 338 aa14.42□□□□□ -0.1
SCAMP2-204ENST00000563829 CC2D1AQ6P1N0 951 aaPredicted RBP14.42□□□□□ -0.1
SCAMP2-204ENST00000563829 CTR9Q6PD62 1173 aa14.42□□□□□ -0.1
SCAMP2-204ENST00000563829 CDK12Q9NYV4 1490 aaPredicted RBP14.42□□□□□ -0.1
SCAMP2-204ENST00000563829 AOX1Q06278 1338 aa14.42□□□□□ -0.1
SCAMP2-204ENST00000563829 CCAR1Q8IX12 1150 aaKnown RBP14.42□□□□□ -0.1
SCAMP2-204ENST00000563829 STK31Q9BXU1 1019 aa14.42□□□□□ -0.1
SCAMP2-204ENST00000563829 KCND1Q9NSA2 647 aa14.42□□□□□ -0.1
SCAMP2-204ENST00000563829 JRKLQ9Y4A0 524 aa14.42□□□□□ -0.1
SCAMP2-204ENST00000563829 MAP2P11137 1827 aaKnown RBP14.42□□□□□ -0.1
SCAMP2-204ENST00000563829 ATP7AQ04656 1500 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms