RNA–Protein interactions for RNA: ENST00000563665.3

ZNF688-204, Transcript of zinc finger protein 688, humanhuman

TSL 1 (best)

Gene ZNF688, Length 1,414 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF688-204ENST00000563665 NLRP10Q86W26 655 aa29.4■■■□□ 2.3
ZNF688-204ENST00000563665 PCCAP05165 728 aaPredicted RBP29.39■■■□□ 2.3
ZNF688-204ENST00000563665 BICC1Q9H694 974 aaKnown RBP29.39■■■□□ 2.3
ZNF688-204ENST00000563665 ADRA2BP18089 450 aa29.38■■■□□ 2.29
ZNF688-204ENST00000563665 PROM2Q8N271 834 aa29.38■■■□□ 2.29
ZNF688-204ENST00000563665 MYH3P11055 1940 aa29.38■■■□□ 2.29
ZNF688-204ENST00000563665 SRGAP3O43295 1099 aa29.37■■■□□ 2.29
ZNF688-204ENST00000563665 RABL6Q3YEC7 729 aaPredicted RBP29.37■■■□□ 2.29
ZNF688-204ENST00000563665 NARFQ9UHQ1 456 aa29.37■■■□□ 2.29
ZNF688-204ENST00000563665 PARP10Q53GL7 1025 aa29.37■■■□□ 2.29
ZNF688-204ENST00000563665 ZBTB38Q8NAP3 1195 aaPredicted RBP29.37■■■□□ 2.29
ZNF688-204ENST00000563665 CDHR2Q9BYE9 1310 aa29.36■■■□□ 2.29
ZNF688-204ENST00000563665 GPTP24298 496 aa29.36■■■□□ 2.29
ZNF688-204ENST00000563665 LAMB2P55268 1798 aa29.35■■■□□ 2.29
ZNF688-204ENST00000563665 UBN2Q6ZU65 1347 aa29.35■■■□□ 2.29
ZNF688-204ENST00000563665 COL24A1Q17RW2 1714 aa29.35■■■□□ 2.29
ZNF688-204ENST00000563665 CHD1LQ86WJ1 897 aa29.34■■■□□ 2.29
ZNF688-204ENST00000563665 EPHA10Q5JZY3 1008 aa29.33■■■□□ 2.29
ZNF688-204ENST00000563665 PLA2G12BQ9BX93 195 aa29.33■■■□□ 2.29
ZNF688-204ENST00000563665 SSFA2P28290 1259 aa29.32■■■□□ 2.28
ZNF688-204ENST00000563665 TRAPPC3LQ5T215 181 aa29.32■■■□□ 2.28
ZNF688-204ENST00000563665 ANKRD45Q5TZF3 282 aa29.32■■■□□ 2.28
ZNF688-204ENST00000563665 SKAP1Q86WV1 359 aa29.32■■■□□ 2.28
ZNF688-204ENST00000563665 JARID2Q92833 1246 aaPredicted RBP29.32■■■□□ 2.28
ZNF688-204ENST00000563665 ARHGEF1Q92888 912 aaKnown RBP29.32■■■□□ 2.28
ZNF688-204ENST00000563665 TUBGCP6Q96RT7 1819 aa29.32■■■□□ 2.28
ZNF688-204ENST00000563665 ZPR1O75312 459 aa29.31■■■□□ 2.28
ZNF688-204ENST00000563665 FOXO4P98177 505 aa29.31■■■□□ 2.28
ZNF688-204ENST00000563665 AMIGO3Q86WK7 504 aa29.31■■■□□ 2.28
ZNF688-204ENST00000563665 USP42Q9H9J4 1324 aaKnown RBP29.31■■■□□ 2.28
ZNF688-204ENST00000563665 BCL2L12Q9HB09 334 aa29.3■■■□□ 2.28
ZNF688-204ENST00000563665 NOP58Q9Y2X3 529 aaKnown RBP29.3■■■□□ 2.28
ZNF688-204ENST00000563665 HSP90AB4PQ58FF6 505 aa29.29■■■□□ 2.28
ZNF688-204ENST00000563665 NIP7Q9Y221 180 aaKnown RBP eCLIP29.29■■■□□ 2.28
ZNF688-204ENST00000563665 RAB11FIP3O75154 756 aa29.28■■■□□ 2.28
ZNF688-204ENST00000563665 RGS3P49796 1198 aa29.28■■■□□ 2.28
ZNF688-204ENST00000563665 TRMT112Q9UI30 125 aaKnown RBP29.28■■■□□ 2.28
ZNF688-204ENST00000563665 EXOC6BQ9Y2D4 811 aa29.28■■■□□ 2.28
ZNF688-204ENST00000563665 DDX60Q8IY21 1712 aaKnown RBP29.28■■■□□ 2.28
ZNF688-204ENST00000563665 RFC4P35249 363 aa29.28■■■□□ 2.28
ZNF688-204ENST00000563665 USPL1Q5W0Q7 1092 aa29.28■■■□□ 2.28
ZNF688-204ENST00000563665 FAM89AQ96GI7 184 aa29.28■■■□□ 2.28
ZNF688-204ENST00000563665 LNPKQ9C0E8 428 aa29.28■■■□□ 2.28
ZNF688-204ENST00000563665 ZBTB47Q9UFB7 747 aaPredicted RBP29.28■■■□□ 2.28
ZNF688-204ENST00000563665 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.27■■■□□ 2.28
ZNF688-204ENST00000563665 PDE4AP27815 886 aa29.27■■■□□ 2.28
ZNF688-204ENST00000563665 RTL5Q5HYW3 569 aaPredicted RBP29.27■■■□□ 2.28
ZNF688-204ENST00000563665 SUSD4Q5VX71 490 aa29.27■■■□□ 2.28
ZNF688-204ENST00000563665 SMIM5Q71RC9 77 aa29.27■■■□□ 2.28
ZNF688-204ENST00000563665 UTP14AQ9BVJ6 771 aaKnown RBP29.27■■■□□ 2.28
ZNF688-204ENST00000563665 SRP68Q9UHB9 627 aaKnown RBP29.27■■■□□ 2.28
ZNF688-204ENST00000563665 SURF6O75683 361 aaKnown RBP29.26■■■□□ 2.27
ZNF688-204ENST00000563665 LMBR1LQ6UX01 489 aa29.26■■■□□ 2.27
ZNF688-204ENST00000563665 AKT1S1Q96B36 256 aa29.26■■■□□ 2.27
ZNF688-204ENST00000563665 PHF14O94880 888 aa29.25■■■□□ 2.27
ZNF688-204ENST00000563665 SH3TC1Q8TE82 1336 aa29.25■■■□□ 2.27
ZNF688-204ENST00000563665 NTSR2O95665 410 aa29.24■■■□□ 2.27
ZNF688-204ENST00000563665 LRRCC1Q9C099 1032 aa29.24■■■□□ 2.27
ZNF688-204ENST00000563665 QSER1Q2KHR3 1735 aa29.24■■■□□ 2.27
ZNF688-204ENST00000563665 HSP90B1P14625 803 aaKnown RBP29.23■■■□□ 2.27
ZNF688-204ENST00000563665 RFX5P48382 616 aaPredicted RBP29.23■■■□□ 2.27
ZNF688-204ENST00000563665 CAMKK2Q96RR4 588 aa29.23■■■□□ 2.27
ZNF688-204ENST00000563665 COPRSQ9NQ92 184 aa29.23■■■□□ 2.27
ZNF688-204ENST00000563665 IRS4O14654 1257 aaPredicted RBP29.22■■■□□ 2.27
ZNF688-204ENST00000563665 TBC1D9BQ66K14 1250 aa29.22■■■□□ 2.27
ZNF688-204ENST00000563665 CSF1RP07333 972 aa29.21■■■□□ 2.27
ZNF688-204ENST00000563665 ERC1Q8IUD2 1116 aa29.21■■■□□ 2.27
ZNF688-204ENST00000563665 CASZ1Q86V15 1759 aa29.21■■■□□ 2.27
ZNF688-204ENST00000563665 PDE8AO60658 829 aa29.2■■■□□ 2.27
ZNF688-204ENST00000563665 ZNF827Q17R98 1081 aa29.2■■■□□ 2.27
ZNF688-204ENST00000563665 KIF1BPQ96EK5 621 aa29.2■■■□□ 2.27
ZNF688-204ENST00000563665 CTSWP56202 376 aa29.2■■■□□ 2.26
ZNF688-204ENST00000563665 SF3B2Q13435 895 aaKnown RBP29.2■■■□□ 2.26
ZNF688-204ENST00000563665 SYNE4Q8N205 404 aa29.2■■■□□ 2.26
ZNF688-204ENST00000563665 PA2G4Q9UQ80 394 aaKnown RBP29.2■■■□□ 2.26
ZNF688-204ENST00000563665 APBB1O00213 710 aa29.19■■■□□ 2.26
ZNF688-204ENST00000563665 PTPN12Q05209 780 aaKnown RBP29.19■■■□□ 2.26
ZNF688-204ENST00000563665 FLAD1Q8NFF5 587 aa29.19■■■□□ 2.26
ZNF688-204ENST00000563665 RHPN1Q8TCX5 695 aa29.19■■■□□ 2.26
ZNF688-204ENST00000563665 SETDB2Q96T68 719 aa29.19■■■□□ 2.26
ZNF688-204ENST00000563665 NYXQ9GZU5 481 aa29.19■■■□□ 2.26
ZNF688-204ENST00000563665 SMARCA5O60264 1052 aaPredicted RBP29.18■■■□□ 2.26
ZNF688-204ENST00000563665 BAG6P46379 1132 aa29.18■■■□□ 2.26
ZNF688-204ENST00000563665 G3BP1Q13283 466 aaKnown RBP eCLIP29.17■■■□□ 2.26
ZNF688-204ENST00000563665 TFCP2L1Q9NZI6 479 aa29.17■■■□□ 2.26
ZNF688-204ENST00000563665 CHMP3Q9Y3E7 222 aa29.17■■■□□ 2.26
ZNF688-204ENST00000563665 EN1Q05925 392 aaPredicted RBP29.16■■■□□ 2.26
ZNF688-204ENST00000563665 OS9Q13438 667 aaPredicted RBP29.16■■■□□ 2.26
ZNF688-204ENST00000563665 EZH2Q15910 746 aaKnown RBP29.16■■■□□ 2.26
ZNF688-204ENST00000563665 TTLL11Q8NHH1 800 aa29.16■■■□□ 2.26
ZNF688-204ENST00000563665 CARMIL3Q8ND23 1372 aa29.15■■■□□ 2.26
ZNF688-204ENST00000563665 GYS1P13807 737 aa29.15■■■□□ 2.26
ZNF688-204ENST00000563665 CCDC125Q86Z20 511 aa29.14■■■□□ 2.26
ZNF688-204ENST00000563665 FAM177BA6PVY3 158 aa29.13■■■□□ 2.25
ZNF688-204ENST00000563665 CCDC57Q2TAC2 916 aa29.13■■■□□ 2.25
ZNF688-204ENST00000563665 BICDL1Q6ZP65 573 aa29.13■■■□□ 2.25
ZNF688-204ENST00000563665 PLEKHM2Q8IWE5 1019 aa29.13■■■□□ 2.25
ZNF688-204ENST00000563665 FBXO3Q9UK99 471 aa29.13■■■□□ 2.25
ZNF688-204ENST00000563665 RTL9Q8NET4 1388 aa29.13■■■□□ 2.25
ZNF688-204ENST00000563665 LRP5O75197 1615 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms