RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 IMMTQ16891 758 aaKnown RBP8.97□□□□□ -0.97
TCF4-216ENST00000562680 AXDND1Q5T1B0 1012 aaPredicted RBP8.97□□□□□ -0.97
TCF4-216ENST00000562680 AIDAQ96BJ3 306 aa8.97□□□□□ -0.97
TCF4-216ENST00000562680 RAI14Q9P0K7 980 aa8.97□□□□□ -0.97
TCF4-216ENST00000562680 NIP7Q9Y221 180 aaKnown RBP eCLIP8.97□□□□□ -0.97
TCF4-216ENST00000562680 LDHCP07864 332 aa8.96□□□□□ -0.97
TCF4-216ENST00000562680 CWC27Q6UX04 472 aaKnown RBP8.96□□□□□ -0.97
TCF4-216ENST00000562680 ANKRD18AQ8IVF6 992 aa8.96□□□□□ -0.97
TCF4-216ENST00000562680 USP19O94966 1318 aa8.96□□□□□ -0.97
TCF4-216ENST00000562680 SPTY2D1Q68D10 685 aaPredicted RBP8.96□□□□□ -0.97
TCF4-216ENST00000562680 KAT6BQ8WYB5 2073 aa8.96□□□□□ -0.97
TCF4-216ENST00000562680 IDH1O75874 414 aaKnown RBP8.96□□□□□ -0.98
TCF4-216ENST00000562680 PDE1AP54750 535 aa8.96□□□□□ -0.98
TCF4-216ENST00000562680 CCDC85AQ96PX6 553 aaPredicted RBP8.96□□□□□ -0.98
TCF4-216ENST00000562680 BOLA2Q9H3K6 86 aa8.96□□□□□ -0.98
TCF4-216ENST00000562680 PHAXQ9H814 394 aaKnown RBP8.96□□□□□ -0.98
TCF4-216ENST00000562680 BRPF3Q9ULD4 1205 aa8.96□□□□□ -0.98
TCF4-216ENST00000562680 DDX49Q9Y6V7 483 aaKnown RBP8.96□□□□□ -0.98
TCF4-216ENST00000562680 SH3TC1Q8TE82 1336 aa8.96□□□□□ -0.98
TCF4-216ENST00000562680 CCDC8Q9H0W5 538 aaPredicted RBP8.96□□□□□ -0.98
TCF4-216ENST00000562680 CDKL5O76039 1030 aa8.96□□□□□ -0.98
TCF4-216ENST00000562680 PRIM1P49642 420 aaKnown RBP8.96□□□□□ -0.98
TCF4-216ENST00000562680 G2E3Q7L622 706 aa8.96□□□□□ -0.98
TCF4-216ENST00000562680 PDCL3Q9H2J4 239 aa8.96□□□□□ -0.98
TCF4-216ENST00000562680 HMG20BQ9P0W2 317 aa8.96□□□□□ -0.98
TCF4-216ENST00000562680 ARHGEF28Q8N1W1 1705 aaKnown RBP8.95□□□□□ -0.98
TCF4-216ENST00000562680 GOLGA6L3A6NEY3 463 aa8.95□□□□□ -0.98
TCF4-216ENST00000562680 ATP2B3Q16720 1220 aa8.95□□□□□ -0.98
TCF4-216ENST00000562680 ARID3AQ99856 593 aa8.95□□□□□ -0.98
TCF4-216ENST00000562680 KDRP35968 1356 aa8.95□□□□□ -0.98
TCF4-216ENST00000562680 MCTP1Q6DN14 999 aa8.95□□□□□ -0.98
TCF4-216ENST00000562680 CCNL1Q9UK58 526 aaPredicted RBP8.95□□□□□ -0.98
TCF4-216ENST00000562680 PLCB2Q00722 1185 aa8.95□□□□□ -0.98
TCF4-216ENST00000562680 FAM98CQ17RN3 349 aaKnown RBP8.95□□□□□ -0.98
TCF4-216ENST00000562680 RASSF8Q8NHQ8 419 aa8.95□□□□□ -0.98
TCF4-216ENST00000562680 VPS37CA5D8V6 355 aaPredicted RBP8.95□□□□□ -0.98
TCF4-216ENST00000562680 IRS4O14654 1257 aaPredicted RBP8.95□□□□□ -0.98
TCF4-216ENST00000562680 MARCH6O60337 910 aa8.95□□□□□ -0.98
TCF4-216ENST00000562680 TDO2P48775 406 aa8.95□□□□□ -0.98
TCF4-216ENST00000562680 ZGPATQ8N5A5 531 aaKnown RBP8.95□□□□□ -0.98
TCF4-216ENST00000562680 PSMD1Q99460 953 aa8.95□□□□□ -0.98
TCF4-216ENST00000562680 DNAJC10Q8IXB1 793 aa8.94□□□□□ -0.98
TCF4-216ENST00000562680 RNF41Q9H4P4 317 aaPredicted RBP8.94□□□□□ -0.98
TCF4-216ENST00000562680 HOOK1Q9UJC3 728 aaKnown RBP8.94□□□□□ -0.98
TCF4-216ENST00000562680 CTDP1Q9Y5B0 961 aaPredicted RBP8.94□□□□□ -0.98
TCF4-216ENST00000562680 SH2B1Q9NRF2 756 aaPredicted RBP8.94□□□□□ -0.98
TCF4-216ENST00000562680 TMOD2Q9NZR1 351 aa8.94□□□□□ -0.98
TCF4-216ENST00000562680 RAD50Q92878 1312 aa8.94□□□□□ -0.98
TCF4-216ENST00000562680 ANKIB1Q9P2G1 1089 aa8.94□□□□□ -0.98
TCF4-216ENST00000562680 ITSN1Q15811 1721 aa8.94□□□□□ -0.98
TCF4-216ENST00000562680 DCAF8L1A6NGE4 600 aa8.94□□□□□ -0.98
TCF4-216ENST00000562680 CLSTN1O94985 981 aa8.94□□□□□ -0.98
TCF4-216ENST00000562680 SLC4A3P48751 1232 aa8.94□□□□□ -0.98
TCF4-216ENST00000562680 ANAPC15P60006 121 aa8.94□□□□□ -0.98
TCF4-216ENST00000562680 FAM193AP78312 1265 aa8.94□□□□□ -0.98
TCF4-216ENST00000562680 CWF19L2Q2TBE0 894 aaKnown RBP8.94□□□□□ -0.98
TCF4-216ENST00000562680 TRAPPC3LQ5T215 181 aa8.94□□□□□ -0.98
TCF4-216ENST00000562680 TRIM22Q8IYM9 498 aa8.94□□□□□ -0.98
TCF4-216ENST00000562680 ANKRD2Q9GZV1 360 aa8.94□□□□□ -0.98
TCF4-216ENST00000562680 MBD3O95983 291 aa8.94□□□□□ -0.98
TCF4-216ENST00000562680 GCKRQ14397 625 aa8.94□□□□□ -0.98
TCF4-216ENST00000562680 UNC5CLQ8IV45 518 aa8.94□□□□□ -0.98
TCF4-216ENST00000562680 PDRG1Q9NUG6 133 aa8.94□□□□□ -0.98
TCF4-216ENST00000562680 WDR33Q9C0J8 1336 aaKnown RBP8.93□□□□□ -0.98
TCF4-216ENST00000562680 ZNF772Q68DY9 489 aaPredicted RBP8.93□□□□□ -0.98
TCF4-216ENST00000562680 ZNF771Q7L3S4 317 aaPredicted RBP8.93□□□□□ -0.98
TCF4-216ENST00000562680 FLAD1Q8NFF5 587 aa8.93□□□□□ -0.98
TCF4-216ENST00000562680 JAKMIP1Q96N16 626 aaKnown RBP8.93□□□□□ -0.98
TCF4-216ENST00000562680 JCADQ9P266 1359 aa8.93□□□□□ -0.98
TCF4-216ENST00000562680 TBC1D9Q6ZT07 1266 aa8.93□□□□□ -0.98
TCF4-216ENST00000562680 PDE8AO60658 829 aa8.93□□□□□ -0.98
TCF4-216ENST00000562680 MAP4K4O95819 1239 aaPredicted RBP8.93□□□□□ -0.98
TCF4-216ENST00000562680 ABCF2Q9UG63 623 aa8.93□□□□□ -0.98
TCF4-216ENST00000562680 TCIRG1Q13488 830 aa8.93□□□□□ -0.98
TCF4-216ENST00000562680 NBPF14Q5TI25 921 aa8.93□□□□□ -0.98
TCF4-216ENST00000562680 TNNQ9UQP3 1299 aa8.93□□□□□ -0.98
TCF4-216ENST00000562680 EYA2O00167 538 aa8.92□□□□□ -0.98
TCF4-216ENST00000562680 DZIP1Q86YF9 867 aaKnown RBP8.92□□□□□ -0.98
TCF4-216ENST00000562680 CCDC47Q96A33 483 aaKnown RBP8.92□□□□□ -0.98
TCF4-216ENST00000562680 LRRC7Q96NW7 1537 aa8.92□□□□□ -0.98
TCF4-216ENST00000562680 GSTO1P78417 241 aa8.92□□□□□ -0.98
TCF4-216ENST00000562680 PLCD3Q8N3E9 789 aa8.92□□□□□ -0.98
TCF4-216ENST00000562680 UBAC1Q9BSL1 405 aa8.92□□□□□ -0.98
TCF4-216ENST00000562680 GNPATO15228 680 aa8.92□□□□□ -0.98
TCF4-216ENST00000562680 WASF1Q92558 559 aa8.92□□□□□ -0.98
TCF4-216ENST00000562680 NAPBQ9H115 298 aa8.92□□□□□ -0.98
TCF4-216ENST00000562680 EPB41L2O43491 1005 aaKnown RBP8.92□□□□□ -0.98
TCF4-216ENST00000562680 IL6STP40189 918 aaPredicted RBP8.92□□□□□ -0.98
TCF4-216ENST00000562680 ZNF396Q96N95 335 aaPredicted RBP8.92□□□□□ -0.98
TCF4-216ENST00000562680 SOS2Q07890 1332 aaPredicted RBP8.92□□□□□ -0.98
TCF4-216ENST00000562680 CCDC73Q6ZRK6 1079 aa8.91□□□□□ -0.98
TCF4-216ENST00000562680 KIF13AQ9H1H9 1805 aa8.91□□□□□ -0.98
TCF4-216ENST00000562680 KDM2BQ8NHM5 1336 aa8.91□□□□□ -0.98
TCF4-216ENST00000562680 CCDC69A6NI79 296 aa8.91□□□□□ -0.98
TCF4-216ENST00000562680 A1BGP04217 495 aa8.91□□□□□ -0.98
TCF4-216ENST00000562680 CHAF1AQ13111 956 aaPredicted RBP8.91□□□□□ -0.98
TCF4-216ENST00000562680 UBR1Q8IWV7 1749 aa8.91□□□□□ -0.98
TCF4-216ENST00000562680 CRB1P82279 1406 aa8.91□□□□□ -0.98
TCF4-216ENST00000562680 HEG1Q9ULI3 1381 aa8.91□□□□□ -0.98
TCF4-216ENST00000562680 SDSP20132 328 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms