RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 LOC102724428A0A0B4J2F2 783 aa20.32■□□□□ 0.84
PKD1-225ENST00000562297 SIK1P57059 783 aa20.32■□□□□ 0.84
PKD1-225ENST00000562297 G3BP1Q13283 466 aaKnown RBP eCLIP20.32■□□□□ 0.84
PKD1-225ENST00000562297 GIGYF2Q6Y7W6 1299 aaKnown RBP20.32■□□□□ 0.84
PKD1-225ENST00000562297 PALLDQ8WX93 1383 aa20.32■□□□□ 0.84
PKD1-225ENST00000562297 INTS5Q6P9B9 1019 aaKnown RBP20.31■□□□□ 0.84
PKD1-225ENST00000562297 LMBR1LQ6UX01 489 aa20.31■□□□□ 0.84
PKD1-225ENST00000562297 SIL1Q9H173 461 aa20.31■□□□□ 0.84
PKD1-225ENST00000562297 A0A0G2JS52 829 aa20.31■□□□□ 0.84
PKD1-225ENST00000562297 ITPK1Q13572 414 aa20.31■□□□□ 0.84
PKD1-225ENST00000562297 HLFQ16534 295 aa20.31■□□□□ 0.84
PKD1-225ENST00000562297 KIF2CQ99661 725 aa20.31■□□□□ 0.84
PKD1-225ENST00000562297 TTC41PQ6P2S7 1318 aa20.3■□□□□ 0.84
PKD1-225ENST00000562297 EIF5BO60841 1220 aaKnown RBP20.3■□□□□ 0.84
PKD1-225ENST00000562297 ATP6V1AP38606 617 aa20.3■□□□□ 0.84
PKD1-225ENST00000562297 RTL5Q5HYW3 569 aaPredicted RBP20.3■□□□□ 0.84
PKD1-225ENST00000562297 EIF5P55010 431 aaKnown RBP20.29■□□□□ 0.84
PKD1-225ENST00000562297 CASC1Q6TDU7 716 aa20.29■□□□□ 0.84
PKD1-225ENST00000562297 EAF2Q96CJ1 260 aaPredicted RBP20.29■□□□□ 0.84
PKD1-225ENST00000562297 BTAF1O14981 1849 aa20.28■□□□□ 0.84
PKD1-225ENST00000562297 NBR1Q14596 966 aa20.28■□□□□ 0.84
PKD1-225ENST00000562297 SMARCC1Q92922 1105 aaPredicted RBP20.28■□□□□ 0.84
PKD1-225ENST00000562297 CCDC87Q9NVE4 849 aa20.28■□□□□ 0.84
PKD1-225ENST00000562297 NHSQ6T4R5 1651 aa20.28■□□□□ 0.84
PKD1-225ENST00000562297 MYH3P11055 1940 aa20.28■□□□□ 0.84
PKD1-225ENST00000562297 ERVV-1B6SEH8 477 aa20.27■□□□□ 0.84
PKD1-225ENST00000562297 CRKLP46109 303 aaKnown RBP20.27■□□□□ 0.84
PKD1-225ENST00000562297 AACSQ86V21 672 aa20.27■□□□□ 0.84
PKD1-225ENST00000562297 USP26Q9BXU7 913 aa20.27■□□□□ 0.84
PKD1-225ENST00000562297 TBC1D2Q9BYX2 928 aa20.27■□□□□ 0.84
PKD1-225ENST00000562297 DAXXQ9UER7 740 aaPredicted RBP20.27■□□□□ 0.84
PKD1-225ENST00000562297 TRIM6-TRIM34B2RNG4 842 aa20.27■□□□□ 0.84
PKD1-225ENST00000562297 PCCAP05165 728 aaPredicted RBP20.27■□□□□ 0.84
PKD1-225ENST00000562297 CHMLP26374 656 aa20.27■□□□□ 0.84
PKD1-225ENST00000562297 BECN1Q14457 450 aa20.27■□□□□ 0.84
PKD1-225ENST00000562297 SBF2Q86WG5 1849 aa20.27■□□□□ 0.83
PKD1-225ENST00000562297 IFIT2P09913 472 aaKnown RBP20.26■□□□□ 0.83
PKD1-225ENST00000562297 HSP90AB3PQ58FF7 597 aa20.26■□□□□ 0.83
PKD1-225ENST00000562297 NLRP10Q86W26 655 aa20.26■□□□□ 0.83
PKD1-225ENST00000562297 RILPL2Q969X0 211 aa20.26■□□□□ 0.83
PKD1-225ENST00000562297 ECHDC1Q9NTX5 307 aa20.26■□□□□ 0.83
PKD1-225ENST00000562297 AFF2P51816 1311 aa20.26■□□□□ 0.83
PKD1-225ENST00000562297 ERC2O15083 957 aa20.26■□□□□ 0.83
PKD1-225ENST00000562297 GLRX3O76003 335 aaKnown RBP20.26■□□□□ 0.83
PKD1-225ENST00000562297 DZIP3Q86Y13 1208 aaKnown RBP20.26■□□□□ 0.83
PKD1-225ENST00000562297 ZBTB38Q8NAP3 1195 aaPredicted RBP20.26■□□□□ 0.83
PKD1-225ENST00000562297 GJD4Q96KN9 370 aaPredicted RBP20.26■□□□□ 0.83
PKD1-225ENST00000562297 ARXQ96QS3 562 aa20.26■□□□□ 0.83
PKD1-225ENST00000562297 PLA2G12BQ9BX93 195 aa20.26■□□□□ 0.83
PKD1-225ENST00000562297 TBC1D2BQ9UPU7 963 aa20.26■□□□□ 0.83
PKD1-225ENST00000562297 ATRNO75882 1429 aa20.25■□□□□ 0.83
PKD1-225ENST00000562297 MEX3CQ5U5Q3 659 aaKnown RBP20.25■□□□□ 0.83
PKD1-225ENST00000562297 PTF1AQ7RTS3 328 aa20.25■□□□□ 0.83
PKD1-225ENST00000562297 EP400Q96L91 3159 aa20.25■□□□□ 0.83
PKD1-225ENST00000562297 FAM89AQ96GI7 184 aa20.24■□□□□ 0.83
PKD1-225ENST00000562297 ESYT1Q9BSJ8 1104 aa20.24■□□□□ 0.83
PKD1-225ENST00000562297 TLR7Q9NYK1 1049 aaKnown RBP20.24■□□□□ 0.83
PKD1-225ENST00000562297 GPTP24298 496 aa20.24■□□□□ 0.83
PKD1-225ENST00000562297 REC8O95072 547 aa20.23■□□□□ 0.83
PKD1-225ENST00000562297 MAP4K4O95819 1239 aaPredicted RBP20.23■□□□□ 0.83
PKD1-225ENST00000562297 ATG9AQ7Z3C6 839 aa20.23■□□□□ 0.83
PKD1-225ENST00000562297 GPATCH3Q96I76 525 aa20.23■□□□□ 0.83
PKD1-225ENST00000562297 CDHR2Q9BYE9 1310 aa20.23■□□□□ 0.83
PKD1-225ENST00000562297 CCDC8Q9H0W5 538 aaPredicted RBP20.23■□□□□ 0.83
PKD1-225ENST00000562297 BCORQ6W2J9 1755 aa20.23■□□□□ 0.83
PKD1-225ENST00000562297 ONECUT3O60422 494 aaPredicted RBP20.22■□□□□ 0.83
PKD1-225ENST00000562297 TFCP2Q12800 502 aa20.22■□□□□ 0.83
PKD1-225ENST00000562297 CHMP3Q9Y3E7 222 aa20.22■□□□□ 0.83
PKD1-225ENST00000562297 UBN2Q6ZU65 1347 aa20.22■□□□□ 0.83
PKD1-225ENST00000562297 ZNF34Q8IZ26 560 aa20.22■□□□□ 0.83
PKD1-225ENST00000562297 SYNE4Q8N205 404 aa20.22■□□□□ 0.83
PKD1-225ENST00000562297 CSF1RP07333 972 aa20.21■□□□□ 0.83
PKD1-225ENST00000562297 TNNI3KQ59H18 835 aa20.21■□□□□ 0.83
PKD1-225ENST00000562297 CNTROBQ8N137 903 aa20.21■□□□□ 0.83
PKD1-225ENST00000562297 FPGT-TNNI3KV9GXZ4 949 aa20.21■□□□□ 0.83
PKD1-225ENST00000562297 SNX21Q969T3 373 aa20.2■□□□□ 0.82
PKD1-225ENST00000562297 IL25Q9H293 177 aa20.2■□□□□ 0.82
PKD1-225ENST00000562297 DBNLQ9UJU6 430 aaKnown RBP20.2■□□□□ 0.82
PKD1-225ENST00000562297 LY75O60449 1722 aa20.2■□□□□ 0.82
PKD1-225ENST00000562297 CAMTA2O94983 1202 aa20.19■□□□□ 0.82
PKD1-225ENST00000562297 LINC00116Q8NCU8 138 aa20.19■□□□□ 0.82
PKD1-225ENST00000562297 FAM182BQ5T319 152 aa20.19■□□□□ 0.82
PKD1-225ENST00000562297 ZNF594Q96JF6 807 aaPredicted RBP20.19■□□□□ 0.82
PKD1-225ENST00000562297 TRPC5Q9UL62 973 aaPredicted RBP20.19■□□□□ 0.82
PKD1-225ENST00000562297 EYA2O00167 538 aa20.18■□□□□ 0.82
PKD1-225ENST00000562297 CIAO1O76071 339 aa20.18■□□□□ 0.82
PKD1-225ENST00000562297 FBXO41Q8TF61 875 aa20.18■□□□□ 0.82
PKD1-225ENST00000562297 TAF1LQ8IZX4 1826 aa20.18■□□□□ 0.82
PKD1-225ENST00000562297 IL15P40933 162 aaPredicted RBP20.17■□□□□ 0.82
PKD1-225ENST00000562297 LRRC24Q50LG9 513 aa20.17■□□□□ 0.82
PKD1-225ENST00000562297 GPR108Q9NPR9 543 aa20.16■□□□□ 0.82
PKD1-225ENST00000562297 TRMT112Q9UI30 125 aaKnown RBP20.16■□□□□ 0.82
PKD1-225ENST00000562297 CNTNAP4Q9C0A0 1308 aa20.16■□□□□ 0.82
PKD1-225ENST00000562297 DDX60Q8IY21 1712 aaKnown RBP20.16■□□□□ 0.82
PKD1-225ENST00000562297 KCNQ4P56696 695 aa20.15■□□□□ 0.82
PKD1-225ENST00000562297 CCDC57Q2TAC2 916 aa20.15■□□□□ 0.82
PKD1-225ENST00000562297 TTLL11Q8NHH1 800 aa20.15■□□□□ 0.82
PKD1-225ENST00000562297 EVI5LQ96CN4 794 aa20.15■□□□□ 0.82
PKD1-225ENST00000562297 PUS3Q9BZE2 481 aaKnown RBP20.15■□□□□ 0.82
PKD1-225ENST00000562297 LAMB2P55268 1798 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms