RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 RBM43Q6ZSC3 357 aaKnown RBP22.13■■□□□ 1.13
BBS4-204ENST00000562084 USP44Q9H0E7 712 aa22.13■■□□□ 1.13
BBS4-204ENST00000562084 MRVI1Q9Y6F6 885 aa22.13■■□□□ 1.13
BBS4-204ENST00000562084 FAM177BA6PVY3 158 aa22.12■■□□□ 1.13
BBS4-204ENST00000562084 HSPA1LP34931 641 aa22.12■■□□□ 1.13
BBS4-204ENST00000562084 TDRD7Q8NHU6 1098 aaKnown RBP22.12■■□□□ 1.13
BBS4-204ENST00000562084 SCAND2PQ9GZW5 306 aaPredicted RBP22.12■■□□□ 1.13
BBS4-204ENST00000562084 CTNNA3Q9UI47 895 aa22.12■■□□□ 1.13
BBS4-204ENST00000562084 SBNO1A3KN83 1393 aa22.12■■□□□ 1.13
BBS4-204ENST00000562084 SPDYE4A6NLX3 237 aa22.11■■□□□ 1.13
BBS4-204ENST00000562084 NEMFO60524 1076 aa22.11■■□□□ 1.13
BBS4-204ENST00000562084 GLRX3O76003 335 aaKnown RBP22.11■■□□□ 1.13
BBS4-204ENST00000562084 MTHFSDQ2M296 383 aaKnown RBP22.11■■□□□ 1.13
BBS4-204ENST00000562084 PLA2G4DQ86XP0 818 aa22.11■■□□□ 1.13
BBS4-204ENST00000562084 CCDC83Q8IWF9 413 aa22.11■■□□□ 1.13
BBS4-204ENST00000562084 FAM193AP78312 1265 aa22.11■■□□□ 1.13
BBS4-204ENST00000562084 NUTM1Q86Y26 1132 aa22.11■■□□□ 1.13
BBS4-204ENST00000562084 SPATA31A3Q5VYP0 1347 aa22.1■■□□□ 1.13
BBS4-204ENST00000562084 TTC21AQ8NDW8 1320 aa22.1■■□□□ 1.13
BBS4-204ENST00000562084 ALS2Q96Q42 1657 aa22.1■■□□□ 1.13
BBS4-204ENST00000562084 CCDC112Q8NEF3 446 aa22.1■■□□□ 1.13
BBS4-204ENST00000562084 IL1RAPL2Q9NP60 686 aa22.1■■□□□ 1.13
BBS4-204ENST00000562084 MIS18AQ9NYP9 233 aa22.1■■□□□ 1.13
BBS4-204ENST00000562084 SURF6O75683 361 aaKnown RBP22.09■■□□□ 1.13
BBS4-204ENST00000562084 ZNF75DP51815 510 aa22.09■■□□□ 1.13
BBS4-204ENST00000562084 CCDC186Q7Z3E2 898 aa22.09■■□□□ 1.13
BBS4-204ENST00000562084 LRRC59Q96AG4 307 aaKnown RBP22.09■■□□□ 1.13
BBS4-204ENST00000562084 CHMP4AQ9BY43 222 aa22.09■■□□□ 1.13
BBS4-204ENST00000562084 TNMDQ9H2S6 317 aa22.09■■□□□ 1.13
BBS4-204ENST00000562084 DDX41Q9UJV9 622 aaKnown RBP22.09■■□□□ 1.13
BBS4-204ENST00000562084 MAP3K19Q56UN5 1328 aa22.09■■□□□ 1.13
BBS4-204ENST00000562084 MORC2Q9Y6X9 1032 aaPredicted RBP22.09■■□□□ 1.13
BBS4-204ENST00000562084 TNS3Q68CZ2 1445 aa22.09■■□□□ 1.13
BBS4-204ENST00000562084 VPS37CA5D8V6 355 aaPredicted RBP22.08■■□□□ 1.13
BBS4-204ENST00000562084 TNNT1P13805 278 aa22.08■■□□□ 1.13
BBS4-204ENST00000562084 ZKSCAN1P17029 563 aaPredicted RBP22.08■■□□□ 1.13
BBS4-204ENST00000562084 HSP90AB2PQ58FF8 381 aa22.08■■□□□ 1.13
BBS4-204ENST00000562084 ZSCAN25Q6NSZ9 544 aa22.08■■□□□ 1.13
BBS4-204ENST00000562084 LMOD2Q6P5Q4 547 aa22.08■■□□□ 1.13
BBS4-204ENST00000562084 CBX8Q9HC52 389 aa22.08■■□□□ 1.13
BBS4-204ENST00000562084 PIK3C2AO00443 1686 aa22.08■■□□□ 1.12
BBS4-204ENST00000562084 LARGE1O95461 756 aa22.07■■□□□ 1.12
BBS4-204ENST00000562084 ANKRD1Q15327 319 aa22.07■■□□□ 1.12
BBS4-204ENST00000562084 PPP1R42Q7Z4L9 355 aa22.07■■□□□ 1.12
BBS4-204ENST00000562084 TTC6Q86TZ1 520 aa22.07■■□□□ 1.12
BBS4-204ENST00000562084 DRC7Q8IY82 874 aa22.07■■□□□ 1.12
BBS4-204ENST00000562084 ABTB2Q8N961 1025 aa22.07■■□□□ 1.12
BBS4-204ENST00000562084 JAKMIP1Q96N16 626 aaKnown RBP22.07■■□□□ 1.12
BBS4-204ENST00000562084 ALDH8A1Q9H2A2 487 aaPredicted RBP22.07■■□□□ 1.12
BBS4-204ENST00000562084 CLSTN2Q9H4D0 955 aa22.07■■□□□ 1.12
BBS4-204ENST00000562084 PSMA5P28066 241 aa22.07■■□□□ 1.12
BBS4-204ENST00000562084 LARP1BQ659C4 914 aaKnown RBP22.07■■□□□ 1.12
BBS4-204ENST00000562084 FLT4P35916 1363 aa22.06■■□□□ 1.12
BBS4-204ENST00000562084 NUTM2GQ5VZR2 741 aa22.06■■□□□ 1.12
BBS4-204ENST00000562084 CWC27Q6UX04 472 aaKnown RBP22.06■■□□□ 1.12
BBS4-204ENST00000562084 CREBRFQ8IUR6 639 aa22.06■■□□□ 1.12
BBS4-204ENST00000562084 GOLGA6L4A6NEF3 574 aa22.05■■□□□ 1.12
BBS4-204ENST00000562084 HIP1O00291 1037 aa22.05■■□□□ 1.12
BBS4-204ENST00000562084 GPATCH3Q96I76 525 aa22.05■■□□□ 1.12
BBS4-204ENST00000562084 TRIM5Q9C035 493 aa22.05■■□□□ 1.12
BBS4-204ENST00000562084 IGSF1Q8N6C5 1336 aa22.05■■□□□ 1.12
BBS4-204ENST00000562084 ANO6Q4KMQ2 910 aa22.05■■□□□ 1.12
BBS4-204ENST00000562084 LUZP1Q86V48 1076 aa22.05■■□□□ 1.12
BBS4-204ENST00000562084 SARM1Q6SZW1 724 aa22.04■■□□□ 1.12
BBS4-204ENST00000562084 ZNF771Q7L3S4 317 aaPredicted RBP22.04■■□□□ 1.12
BBS4-204ENST00000562084 GIGYF1O75420 1035 aaPredicted RBP22.03■■□□□ 1.12
BBS4-204ENST00000562084 LIG1P18858 919 aa22.03■■□□□ 1.12
BBS4-204ENST00000562084 NECTIN1Q15223 517 aa22.03■■□□□ 1.12
BBS4-204ENST00000562084 ME3Q16798 604 aa22.03■■□□□ 1.12
BBS4-204ENST00000562084 C16orf45Q96MC5 204 aaPredicted RBP22.03■■□□□ 1.12
BBS4-204ENST00000562084 SPG7Q9UQ90 795 aa22.03■■□□□ 1.12
BBS4-204ENST00000562084 MARF1Q9Y4F3 1742 aaKnown RBP22.03■■□□□ 1.12
BBS4-204ENST00000562084 MAP4K4O95819 1239 aaPredicted RBP22.03■■□□□ 1.12
BBS4-204ENST00000562084 NLRP6P59044 892 aa22.03■■□□□ 1.12
BBS4-204ENST00000562084 TPD52L1Q16890 204 aaPredicted RBP22.03■■□□□ 1.12
BBS4-204ENST00000562084 TPRNQ4KMQ1 711 aa22.03■■□□□ 1.12
BBS4-204ENST00000562084 ZNF397Q8NF99 534 aaPredicted RBP22.03■■□□□ 1.12
BBS4-204ENST00000562084 GNAT3A8MTJ3 354 aa22.02■■□□□ 1.12
BBS4-204ENST00000562084 SRGAP3O43295 1099 aa22.02■■□□□ 1.12
BBS4-204ENST00000562084 RBM6P78332 1123 aaKnown RBP22.02■■□□□ 1.12
BBS4-204ENST00000562084 ST3GAL1Q11201 340 aa22.02■■□□□ 1.12
BBS4-204ENST00000562084 SLFNL1Q499Z3 407 aa22.02■■□□□ 1.12
BBS4-204ENST00000562084 RNF20Q5VTR2 975 aa22.02■■□□□ 1.12
BBS4-204ENST00000562084 DACT1Q9NYF0 836 aa22.02■■□□□ 1.12
BBS4-204ENST00000562084 KIF2AO00139 706 aaPredicted RBP22.01■■□□□ 1.11
BBS4-204ENST00000562084 CEP135Q66GS9 1140 aa22.01■■□□□ 1.11
BBS4-204ENST00000562084 PRPF40BQ6NWY9 871 aaKnown RBP22.01■■□□□ 1.11
BBS4-204ENST00000562084 KIF18AQ8NI77 898 aa22.01■■□□□ 1.11
BBS4-204ENST00000562084 EVI5LQ96CN4 794 aa22.01■■□□□ 1.11
BBS4-204ENST00000562084 MRFAP1L1Q96HT8 127 aa22.01■■□□□ 1.11
BBS4-204ENST00000562084 SPATA32Q96LK8 384 aa22.01■■□□□ 1.11
BBS4-204ENST00000562084 SNRKQ9NRH2 765 aa22.01■■□□□ 1.11
BBS4-204ENST00000562084 KCND1Q9NSA2 647 aa22.01■■□□□ 1.11
BBS4-204ENST00000562084 CLIP2Q9UDT6 1046 aa22.01■■□□□ 1.11
BBS4-204ENST00000562084 KRT222Q8N1A0 295 aa22■■□□□ 1.11
BBS4-204ENST00000562084 CCDC66A2RUB6 948 aa22■■□□□ 1.11
BBS4-204ENST00000562084 ZNF165P49910 485 aa22■■□□□ 1.11
BBS4-204ENST00000562084 LRMPQ12912 555 aa22■■□□□ 1.11
BBS4-204ENST00000562084 ERC1Q8IUD2 1116 aa22■■□□□ 1.11
BBS4-204ENST00000562084 LARP6Q9BRS8 491 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms