RNA–Protein interactions for RNA: ENST00000561831.7

TCF4-210, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,823 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-210ENST00000561831 JCADQ9P266 1359 aa12.72□□□□□ -0.37
TCF4-210ENST00000561831 CYP27B1O15528 508 aa12.72□□□□□ -0.37
TCF4-210ENST00000561831 RFX5P48382 616 aaPredicted RBP12.72□□□□□ -0.37
TCF4-210ENST00000561831 RABL6Q3YEC7 729 aaPredicted RBP12.72□□□□□ -0.37
TCF4-210ENST00000561831 EPHA10Q5JZY3 1008 aa12.72□□□□□ -0.37
TCF4-210ENST00000561831 FOXD4L5Q5VV16 416 aaPredicted RBP12.72□□□□□ -0.37
TCF4-210ENST00000561831 FOXD4L4Q8WXT5 416 aaPredicted RBP12.72□□□□□ -0.37
TCF4-210ENST00000561831 MAP4K1Q92918 833 aa12.72□□□□□ -0.37
TCF4-210ENST00000561831 PDLIM2Q96JY6 352 aa12.72□□□□□ -0.37
TCF4-210ENST00000561831 COPRSQ9NQ92 184 aa12.72□□□□□ -0.37
TCF4-210ENST00000561831 TRIM44Q96DX7 344 aaPredicted RBP12.71□□□□□ -0.38
TCF4-210ENST00000561831 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.71□□□□□ -0.38
TCF4-210ENST00000561831 USP16Q9Y5T5 823 aa12.71□□□□□ -0.38
TCF4-210ENST00000561831 CASTP20810 708 aaKnown RBP12.7□□□□□ -0.38
TCF4-210ENST00000561831 ADCK5Q3MIX3 580 aa12.7□□□□□ -0.38
TCF4-210ENST00000561831 PRPF40BQ6NWY9 871 aaKnown RBP12.7□□□□□ -0.38
TCF4-210ENST00000561831 ANKRD13DQ6ZTN6 518 aa12.7□□□□□ -0.38
TCF4-210ENST00000561831 ZSCAN31Q96LW9 406 aaPredicted RBP12.7□□□□□ -0.38
TCF4-210ENST00000561831 FMNL2Q96PY5 1086 aa12.7□□□□□ -0.38
TCF4-210ENST00000561831 MYD88Q99836 296 aa12.7□□□□□ -0.38
TCF4-210ENST00000561831 CCDC8Q9H0W5 538 aaPredicted RBP12.7□□□□□ -0.38
TCF4-210ENST00000561831 TLR7Q9NYK1 1049 aaKnown RBP12.7□□□□□ -0.38
TCF4-210ENST00000561831 MED23Q9ULK4 1368 aa12.7□□□□□ -0.38
TCF4-210ENST00000561831 ZSCAN22P10073 491 aaPredicted RBP12.69□□□□□ -0.38
TCF4-210ENST00000561831 MYL6BP14649 208 aa12.69□□□□□ -0.38
TCF4-210ENST00000561831 HS1BP3Q53T59 392 aa12.69□□□□□ -0.38
TCF4-210ENST00000561831 DDX17Q92841 729 aaKnown RBP12.69□□□□□ -0.38
TCF4-210ENST00000561831 PARP4Q9UKK3 1724 aaKnown RBP12.69□□□□□ -0.38
TCF4-210ENST00000561831 SPATA31A3Q5VYP0 1347 aa12.69□□□□□ -0.38
TCF4-210ENST00000561831 STRCP1A6NGW2 1772 aa12.69□□□□□ -0.38
TCF4-210ENST00000561831 SYCE3A1L190 88 aa12.69□□□□□ -0.38
TCF4-210ENST00000561831 LARGE1O95461 756 aa12.69□□□□□ -0.38
TCF4-210ENST00000561831 CASP7P55210 303 aa12.69□□□□□ -0.38
TCF4-210ENST00000561831 NMIQ13287 307 aaPredicted RBP12.69□□□□□ -0.38
TCF4-210ENST00000561831 CREB3L3Q68CJ9 461 aa12.69□□□□□ -0.38
TCF4-210ENST00000561831 CADPS2Q86UW7 1296 aa12.69□□□□□ -0.38
TCF4-210ENST00000561831 ANP32BQ92688 251 aaKnown RBP12.69□□□□□ -0.38
TCF4-210ENST00000561831 FAM227BQ96M60 508 aa12.69□□□□□ -0.38
TCF4-210ENST00000561831 JAKMIP1Q96N16 626 aaKnown RBP12.69□□□□□ -0.38
TCF4-210ENST00000561831 ALDH8A1Q9H2A2 487 aaPredicted RBP12.69□□□□□ -0.38
TCF4-210ENST00000561831 SH2B1Q9NRF2 756 aaPredicted RBP12.69□□□□□ -0.38
TCF4-210ENST00000561831 PDRG1Q9NUG6 133 aa12.69□□□□□ -0.38
TCF4-210ENST00000561831 RBM8AQ9Y5S9 174 aaKnown RBP12.69□□□□□ -0.38
TCF4-210ENST00000561831 STX6O43752 255 aa12.68□□□□□ -0.38
TCF4-210ENST00000561831 CPA1P15085 419 aa12.68□□□□□ -0.38
TCF4-210ENST00000561831 SYT1P21579 422 aa12.68□□□□□ -0.38
TCF4-210ENST00000561831 PTPN12Q05209 780 aaKnown RBP12.68□□□□□ -0.38
TCF4-210ENST00000561831 ST3GAL1Q11201 340 aa12.68□□□□□ -0.38
TCF4-210ENST00000561831 TSGA10IPQ3SY00 556 aa12.68□□□□□ -0.38
TCF4-210ENST00000561831 USP48Q86UV5 1035 aa12.68□□□□□ -0.38
TCF4-210ENST00000561831 TTC5Q8N0Z6 440 aa12.68□□□□□ -0.38
TCF4-210ENST00000561831 CYP46A1Q9Y6A2 500 aa12.68□□□□□ -0.38
TCF4-210ENST00000561831 RFX7Q2KHR2 1363 aa12.68□□□□□ -0.38
TCF4-210ENST00000561831 CSB-PGBD3P0DP91 1061 aa12.67□□□□□ -0.38
TCF4-210ENST00000561831 ZKSCAN1P17029 563 aaPredicted RBP12.67□□□□□ -0.38
TCF4-210ENST00000561831 ATP5JP18859 108 aa12.67□□□□□ -0.38
TCF4-210ENST00000561831 KLHL34Q8N239 644 aa12.67□□□□□ -0.38
TCF4-210ENST00000561831 KLHDC4Q8TBB5 520 aa12.67□□□□□ -0.38
TCF4-210ENST00000561831 A0A0D9SFI3 127 aa12.67□□□□□ -0.38
TCF4-210ENST00000561831 SLC27A2O14975 620 aa12.67□□□□□ -0.38
TCF4-210ENST00000561831 GADD45BO75293 160 aaPredicted RBP12.67□□□□□ -0.38
TCF4-210ENST00000561831 F13A1P00488 732 aa12.67□□□□□ -0.38
TCF4-210ENST00000561831 PLBD2Q8NHP8 589 aa12.67□□□□□ -0.38
TCF4-210ENST00000561831 CABLES1Q8TDN4 633 aa12.67□□□□□ -0.38
TCF4-210ENST00000561831 SYAP1Q96A49 352 aaPredicted RBP12.67□□□□□ -0.38
TCF4-210ENST00000561831 SIL1Q9H173 461 aa12.67□□□□□ -0.38
TCF4-210ENST00000561831 BOLA2Q9H3K6 86 aa12.67□□□□□ -0.38
TCF4-210ENST00000561831 SMC3Q9UQE7 1217 aa12.67□□□□□ -0.38
TCF4-210ENST00000561831 CHRNA2Q15822 529 aa12.66□□□□□ -0.38
TCF4-210ENST00000561831 TNNI3KQ59H18 835 aa12.66□□□□□ -0.38
TCF4-210ENST00000561831 USPL1Q5W0Q7 1092 aa12.66□□□□□ -0.38
TCF4-210ENST00000561831 ZSCAN30Q86W11 494 aa12.66□□□□□ -0.38
TCF4-210ENST00000561831 FPGT-TNNI3KV9GXZ4 949 aa12.66□□□□□ -0.38
TCF4-210ENST00000561831 LAMB4A4D0S4 1761 aa12.66□□□□□ -0.38
TCF4-210ENST00000561831 PDIA4P13667 645 aaKnown RBP12.65□□□□□ -0.38
TCF4-210ENST00000561831 PSMA5P28066 241 aa12.65□□□□□ -0.38
TCF4-210ENST00000561831 LARP6Q9BRS8 491 aaKnown RBP12.65□□□□□ -0.38
TCF4-210ENST00000561831 FSD1Q9BTV5 496 aa12.65□□□□□ -0.38
TCF4-210ENST00000561831 DBNLQ9UJU6 430 aaKnown RBP12.65□□□□□ -0.38
TCF4-210ENST00000561831 MTMR6Q9Y217 621 aa12.65□□□□□ -0.38
TCF4-210ENST00000561831 STRCQ7RTU9 1775 aa12.65□□□□□ -0.38
TCF4-210ENST00000561831 H7C1W4 665 aa12.65□□□□□ -0.39
TCF4-210ENST00000561831 GJB2P29033 226 aa12.65□□□□□ -0.39
TCF4-210ENST00000561831 CABP4P57796 275 aa12.65□□□□□ -0.39
TCF4-210ENST00000561831 ME3Q16798 604 aa12.65□□□□□ -0.39
TCF4-210ENST00000561831 CCDC83Q8IWF9 413 aa12.65□□□□□ -0.39
TCF4-210ENST00000561831 GDPD2Q9HCC8 539 aa12.65□□□□□ -0.39
TCF4-210ENST00000561831 HMG20BQ9P0W2 317 aa12.65□□□□□ -0.39
TCF4-210ENST00000561831 ATP6V1DQ9Y5K8 247 aa12.65□□□□□ -0.39
TCF4-210ENST00000561831 ARFGEF2Q9Y6D5 1785 aa12.64□□□□□ -0.39
TCF4-210ENST00000561831 TAF5LO75529 589 aa12.64□□□□□ -0.39
TCF4-210ENST00000561831 PHF14O94880 888 aa12.64□□□□□ -0.39
TCF4-210ENST00000561831 TFCP2Q12800 502 aa12.64□□□□□ -0.39
TCF4-210ENST00000561831 TSPY26PQ9H489 355 aa12.64□□□□□ -0.39
TCF4-210ENST00000561831 TPCN1Q9ULQ1 816 aa12.64□□□□□ -0.39
TCF4-210ENST00000561831 CNPY2Q9Y2B0 182 aa12.64□□□□□ -0.39
TCF4-210ENST00000561831 A0A087WZG4 1122 aa12.63□□□□□ -0.39
TCF4-210ENST00000561831 NBPF26B4DH59 902 aa12.63□□□□□ -0.39
TCF4-210ENST00000561831 UBE2HP62256 183 aa12.63□□□□□ -0.39
TCF4-210ENST00000561831 NKX1-1Q15270 411 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms