RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 LRRFIP2Q9Y608 721 aaKnown RBP22.03■■□□□ 1.12
RAB40C-206ENST00000561781 ZSCAN26Q16670 478 aa22.02■■□□□ 1.12
RAB40C-206ENST00000561781 ATG3Q9NT62 314 aa22.02■■□□□ 1.12
RAB40C-206ENST00000561781 JRKLQ9Y4A0 524 aa22.02■■□□□ 1.12
RAB40C-206ENST00000561781 NSD2O96028 1365 aa22.02■■□□□ 1.12
RAB40C-206ENST00000561781 A0A1B0GUL7 405 aa22.02■■□□□ 1.12
RAB40C-206ENST00000561781 CCDC172P0C7W6 258 aa22.02■■□□□ 1.12
RAB40C-206ENST00000561781 GYS2P54840 703 aa22.02■■□□□ 1.12
RAB40C-206ENST00000561781 LRMPQ12912 555 aa22.02■■□□□ 1.12
RAB40C-206ENST00000561781 GIMAP6Q6P9H5 292 aa22.02■■□□□ 1.12
RAB40C-206ENST00000561781 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.02■■□□□ 1.12
RAB40C-206ENST00000561781 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.02■■□□□ 1.12
RAB40C-206ENST00000561781 CNPY2Q9Y2B0 182 aa22.02■■□□□ 1.12
RAB40C-206ENST00000561781 V9GYY5 206 aaPredicted RBP22.02■■□□□ 1.12
RAB40C-206ENST00000561781 CCDC192P0DO97 292 aa22.01■■□□□ 1.11
RAB40C-206ENST00000561781 TSPYL6Q8N831 410 aa22.01■■□□□ 1.11
RAB40C-206ENST00000561781 SRCIN1Q9C0H9 1055 aa22.01■■□□□ 1.11
RAB40C-206ENST00000561781 MED1Q15648 1581 aaPredicted RBP22.01■■□□□ 1.11
RAB40C-206ENST00000561781 PRR29P0C7W0 189 aa22.01■■□□□ 1.11
RAB40C-206ENST00000561781 COL3A1P02461 1466 aaPredicted RBP22.01■■□□□ 1.11
RAB40C-206ENST00000561781 PNMA6AP0CW24 399 aaPredicted RBP22■■□□□ 1.11
RAB40C-206ENST00000561781 SRLQ86TD4 932 aa22■■□□□ 1.11
RAB40C-206ENST00000561781 DRC7Q8IY82 874 aa22■■□□□ 1.11
RAB40C-206ENST00000561781 APBB1O00213 710 aa22■■□□□ 1.11
RAB40C-206ENST00000561781 ADAMTS2O95450 1211 aa22■■□□□ 1.11
RAB40C-206ENST00000561781 PLA2G4AP47712 749 aa22■■□□□ 1.11
RAB40C-206ENST00000561781 FAM200AQ8TCP9 573 aa22■■□□□ 1.11
RAB40C-206ENST00000561781 RPAP1Q9BWH6 1393 aaPredicted RBP22■■□□□ 1.11
RAB40C-206ENST00000561781 ZC3H6P61129 1189 aaKnown RBP21.99■■□□□ 1.11
RAB40C-206ENST00000561781 PTPN14Q15678 1187 aa21.99■■□□□ 1.11
RAB40C-206ENST00000561781 CT47A1Q5JQC4 288 aaPredicted RBP21.99■■□□□ 1.11
RAB40C-206ENST00000561781 TTC21AQ8NDW8 1320 aa21.99■■□□□ 1.11
RAB40C-206ENST00000561781 MARF1Q9Y4F3 1742 aaKnown RBP21.99■■□□□ 1.11
RAB40C-206ENST00000561781 CARD10Q9BWT7 1032 aa21.99■■□□□ 1.11
RAB40C-206ENST00000561781 ELL2O00472 640 aaPredicted RBP21.98■■□□□ 1.11
RAB40C-206ENST00000561781 SAMD1Q6SPF0 538 aaPredicted RBP21.98■■□□□ 1.11
RAB40C-206ENST00000561781 LCMT1Q9UIC8 334 aa21.98■■□□□ 1.11
RAB40C-206ENST00000561781 PALD1Q9ULE6 856 aa21.98■■□□□ 1.11
RAB40C-206ENST00000561781 OVOS2A0A0J9YW53 1432 aa21.98■■□□□ 1.11
RAB40C-206ENST00000561781 OVOS2Q6IE36 1432 aa21.98■■□□□ 1.11
RAB40C-206ENST00000561781 RRS1Q15050 365 aaKnown RBP21.98■■□□□ 1.11
RAB40C-206ENST00000561781 GOLGA5Q8TBA6 731 aa21.98■■□□□ 1.11
RAB40C-206ENST00000561781 RTL1A6NKG5 1358 aa21.97■■□□□ 1.11
RAB40C-206ENST00000561781 HAP1P54257 671 aaPredicted RBP21.97■■□□□ 1.11
RAB40C-206ENST00000561781 COG3Q96JB2 828 aa21.97■■□□□ 1.11
RAB40C-206ENST00000561781 RRP15Q9Y3B9 282 aaKnown RBP21.97■■□□□ 1.11
RAB40C-206ENST00000561781 ARHGEF10O15013 1369 aa21.97■■□□□ 1.11
RAB40C-206ENST00000561781 NYAP1Q6ZVC0 841 aa21.97■■□□□ 1.11
RAB40C-206ENST00000561781 KIF20BQ96Q89 1820 aa21.97■■□□□ 1.11
RAB40C-206ENST00000561781 JCADQ9P266 1359 aa21.96■■□□□ 1.11
RAB40C-206ENST00000561781 TTC31Q49AM3 519 aaPredicted RBP21.96■■□□□ 1.11
RAB40C-206ENST00000561781 FBXO18Q8NFZ0 1043 aa21.96■■□□□ 1.11
RAB40C-206ENST00000561781 DEF6Q9H4E7 631 aa21.96■■□□□ 1.11
RAB40C-206ENST00000561781 ERBB3P21860 1342 aa21.96■■□□□ 1.11
RAB40C-206ENST00000561781 KIF2AO00139 706 aaPredicted RBP21.96■■□□□ 1.11
RAB40C-206ENST00000561781 GCP02774 474 aa21.95■■□□□ 1.1
RAB40C-206ENST00000561781 CLCN6P51797 869 aa21.95■■□□□ 1.1
RAB40C-206ENST00000561781 CHRNA2Q15822 529 aa21.95■■□□□ 1.1
RAB40C-206ENST00000561781 GPATCH11Q8N954 259 aa21.95■■□□□ 1.1
RAB40C-206ENST00000561781 LRP6O75581 1613 aa21.95■■□□□ 1.1
RAB40C-206ENST00000561781 NEMFO60524 1076 aa21.95■■□□□ 1.1
RAB40C-206ENST00000561781 ATP2B1P20020 1258 aa21.95■■□□□ 1.1
RAB40C-206ENST00000561781 ANKRD44Q8N8A2 993 aa21.95■■□□□ 1.1
RAB40C-206ENST00000561781 SMARCE1Q969G3 411 aa21.95■■□□□ 1.1
RAB40C-206ENST00000561781 TOMM22Q9NS69 142 aa21.95■■□□□ 1.1
RAB40C-206ENST00000561781 ARGLU1Q9NWB6 273 aaPredicted RBP21.95■■□□□ 1.1
RAB40C-206ENST00000561781 RGS12O14924 1447 aa21.94■■□□□ 1.1
RAB40C-206ENST00000561781 ATP10DQ9P241 1426 aa21.94■■□□□ 1.1
RAB40C-206ENST00000561781 POLR3GO15318 223 aaPredicted RBP21.94■■□□□ 1.1
RAB40C-206ENST00000561781 ATP8B1O43520 1251 aa21.94■■□□□ 1.1
RAB40C-206ENST00000561781 CEP120Q8N960 986 aa21.94■■□□□ 1.1
RAB40C-206ENST00000561781 AK7Q96M32 723 aa21.94■■□□□ 1.1
RAB40C-206ENST00000561781 PLEKHG2Q9H7P9 1386 aa21.93■■□□□ 1.1
RAB40C-206ENST00000561781 ELP1O95163 1332 aa21.93■■□□□ 1.1
RAB40C-206ENST00000561781 CCDC91Q7Z6B0 441 aa21.93■■□□□ 1.1
RAB40C-206ENST00000561781 PLA2G4DQ86XP0 818 aa21.93■■□□□ 1.1
RAB40C-206ENST00000561781 IQUBQ8NA54 791 aa21.93■■□□□ 1.1
RAB40C-206ENST00000561781 UPF3BQ9BZI7 483 aaKnown RBP21.93■■□□□ 1.1
RAB40C-206ENST00000561781 API5Q9BZZ5 524 aaKnown RBP21.93■■□□□ 1.1
RAB40C-206ENST00000561781 FIBPO43427 364 aa21.92■■□□□ 1.1
RAB40C-206ENST00000561781 THUMPD2Q9BTF0 503 aaKnown RBP21.92■■□□□ 1.1
RAB40C-206ENST00000561781 DONSONQ9NYP3 566 aa21.92■■□□□ 1.1
RAB40C-206ENST00000561781 NRBP1Q9UHY1 535 aa21.92■■□□□ 1.1
RAB40C-206ENST00000561781 ZRANB2O95218 330 aaKnown RBP eCLIP21.92■■□□□ 1.1
RAB40C-206ENST00000561781 MCCP23508 829 aa21.92■■□□□ 1.1
RAB40C-206ENST00000561781 ZNF75DP51815 510 aa21.92■■□□□ 1.1
RAB40C-206ENST00000561781 CACTINQ8WUQ7 758 aaKnown RBP21.92■■□□□ 1.1
RAB40C-206ENST00000561781 DRC1Q96MC2 740 aa21.92■■□□□ 1.1
RAB40C-206ENST00000561781 MAGEA9P43362 315 aa21.91■■□□□ 1.1
RAB40C-206ENST00000561781 TMCO3Q6UWJ1 677 aa21.91■■□□□ 1.1
RAB40C-206ENST00000561781 ATP6V1DQ9Y5K8 247 aa21.91■■□□□ 1.1
RAB40C-206ENST00000561781 EMILIN1Q9Y6C2 1016 aa21.91■■□□□ 1.1
RAB40C-206ENST00000561781 ABCA3Q99758 1704 aa21.91■■□□□ 1.1
RAB40C-206ENST00000561781 CRYBG1Q9Y4K1 1723 aa21.91■■□□□ 1.1
RAB40C-206ENST00000561781 KIAA0232Q92628 1395 aa21.91■■□□□ 1.1
RAB40C-206ENST00000561781 PHRF1Q9P1Y6 1649 aaKnown RBP21.91■■□□□ 1.1
RAB40C-206ENST00000561781 KIF1CO43896 1103 aaKnown RBP21.91■■□□□ 1.1
RAB40C-206ENST00000561781 ST5P78524 1137 aa21.91■■□□□ 1.1
RAB40C-206ENST00000561781 TRIM5Q9C035 493 aa21.91■■□□□ 1.1
RAB40C-206ENST00000561781 USP31Q70CQ4 1352 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms