RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 ZBTB38Q8NAP3 1195 aaPredicted RBP21.08■□□□□ 0.97
HDDC3-206ENST00000561036 ARXQ96QS3 562 aa21.08■□□□□ 0.97
HDDC3-206ENST00000561036 PLA2G12BQ9BX93 195 aa21.08■□□□□ 0.97
HDDC3-206ENST00000561036 CDC45O75419 566 aa21.07■□□□□ 0.96
HDDC3-206ENST00000561036 RFX5P48382 616 aaPredicted RBP21.07■□□□□ 0.96
HDDC3-206ENST00000561036 HLFQ16534 295 aa21.07■□□□□ 0.96
HDDC3-206ENST00000561036 NLRP10Q86W26 655 aa21.07■□□□□ 0.96
HDDC3-206ENST00000561036 CDHR2Q9BYE9 1310 aa21.06■□□□□ 0.96
HDDC3-206ENST00000561036 USP42Q9H9J4 1324 aaKnown RBP21.06■□□□□ 0.96
HDDC3-206ENST00000561036 SBF2Q86WG5 1849 aa21.06■□□□□ 0.96
HDDC3-206ENST00000561036 SEC24BO95487 1268 aa21.06■□□□□ 0.96
HDDC3-206ENST00000561036 ZNF34Q8IZ26 560 aa21.06■□□□□ 0.96
HDDC3-206ENST00000561036 CLASRPQ8N2M8 674 aaKnown RBP21.06■□□□□ 0.96
HDDC3-206ENST00000561036 JARID2Q92833 1246 aaPredicted RBP21.06■□□□□ 0.96
HDDC3-206ENST00000561036 BCL11BQ9C0K0 894 aaPredicted RBP21.06■□□□□ 0.96
HDDC3-206ENST00000561036 PA2G4Q9UQ80 394 aaKnown RBP21.06■□□□□ 0.96
HDDC3-206ENST00000561036 LMBR1LQ6UX01 489 aa21.05■□□□□ 0.96
HDDC3-206ENST00000561036 LINC00116Q8NCU8 138 aa21.05■□□□□ 0.96
HDDC3-206ENST00000561036 IL1RAPL2Q9NP60 686 aa21.05■□□□□ 0.96
HDDC3-206ENST00000561036 TBC1D2BQ9UPU7 963 aa21.05■□□□□ 0.96
HDDC3-206ENST00000561036 NUP98P52948 1817 aa21.04■□□□□ 0.96
HDDC3-206ENST00000561036 FAM196AQ6ZSG2 479 aa21.04■□□□□ 0.96
HDDC3-206ENST00000561036 MYH14Q7Z406 1995 aaKnown RBP21.04■□□□□ 0.96
HDDC3-206ENST00000561036 TTC41PQ6P2S7 1318 aa21.04■□□□□ 0.96
HDDC3-206ENST00000561036 CAMTA2O94983 1202 aa21.03■□□□□ 0.96
HDDC3-206ENST00000561036 SDSP20132 328 aa21.03■□□□□ 0.96
HDDC3-206ENST00000561036 PTPN12Q05209 780 aaKnown RBP21.03■□□□□ 0.96
HDDC3-206ENST00000561036 PTF1AQ7RTS3 328 aa21.03■□□□□ 0.96
HDDC3-206ENST00000561036 DDRGK1Q96HY6 314 aa21.03■□□□□ 0.96
HDDC3-206ENST00000561036 IPO9Q96P70 1041 aaKnown RBP21.03■□□□□ 0.96
HDDC3-206ENST00000561036 ZNF652Q9Y2D9 606 aa21.03■□□□□ 0.96
HDDC3-206ENST00000561036 LY75O60449 1722 aa21.02■□□□□ 0.96
HDDC3-206ENST00000561036 SASH1O94885 1247 aa21.02■□□□□ 0.96
HDDC3-206ENST00000561036 RBM6P78332 1123 aaKnown RBP21.02■□□□□ 0.96
HDDC3-206ENST00000561036 PARP10Q53GL7 1025 aa21.02■□□□□ 0.96
HDDC3-206ENST00000561036 CASC1Q6TDU7 716 aa21.02■□□□□ 0.96
HDDC3-206ENST00000561036 TBC1D9Q6ZT07 1266 aa21.02■□□□□ 0.96
HDDC3-206ENST00000561036 KRT27Q7Z3Y8 459 aa21.02■□□□□ 0.96
HDDC3-206ENST00000561036 GPATCH3Q96I76 525 aa21.02■□□□□ 0.96
HDDC3-206ENST00000561036 AK7Q96M32 723 aa21.02■□□□□ 0.96
HDDC3-206ENST00000561036 BCL11AQ9H165 835 aa21.02■□□□□ 0.96
HDDC3-206ENST00000561036 FAM182BQ5T319 152 aa21.01■□□□□ 0.95
HDDC3-206ENST00000561036 CLEC4GQ6UXB4 293 aa21.01■□□□□ 0.95
HDDC3-206ENST00000561036 TBC1D32Q96NH3 1257 aa21.01■□□□□ 0.95
HDDC3-206ENST00000561036 FBXO3Q9UK99 471 aa21.01■□□□□ 0.95
HDDC3-206ENST00000561036 CSF1RP07333 972 aa21■□□□□ 0.95
HDDC3-206ENST00000561036 IFIT2P09913 472 aaKnown RBP21■□□□□ 0.95
HDDC3-206ENST00000561036 GPTP24298 496 aa21■□□□□ 0.95
HDDC3-206ENST00000561036 HMGB2P26583 209 aaKnown RBP21■□□□□ 0.95
HDDC3-206ENST00000561036 CCNL1Q9UK58 526 aaPredicted RBP21■□□□□ 0.95
HDDC3-206ENST00000561036 RPS6KA4O75676 772 aa20.99■□□□□ 0.95
HDDC3-206ENST00000561036 HSP90B1P14625 803 aaKnown RBP20.99■□□□□ 0.95
HDDC3-206ENST00000561036 NUTM1Q86Y26 1132 aa20.99■□□□□ 0.95
HDDC3-206ENST00000561036 FAM89AQ96GI7 184 aa20.99■□□□□ 0.95
HDDC3-206ENST00000561036 TRMT112Q9UI30 125 aaKnown RBP20.99■□□□□ 0.95
HDDC3-206ENST00000561036 BCORQ6W2J9 1755 aa20.98■□□□□ 0.95
HDDC3-206ENST00000561036 ERC2O15083 957 aa20.98■□□□□ 0.95
HDDC3-206ENST00000561036 CIAO1O76071 339 aa20.98■□□□□ 0.95
HDDC3-206ENST00000561036 RTL5Q5HYW3 569 aaPredicted RBP20.98■□□□□ 0.95
HDDC3-206ENST00000561036 PI4K2BQ8TCG2 481 aa20.98■□□□□ 0.95
HDDC3-206ENST00000561036 SIL1Q9H173 461 aa20.98■□□□□ 0.95
HDDC3-206ENST00000561036 TUBGCP6Q96RT7 1819 aa20.98■□□□□ 0.95
HDDC3-206ENST00000561036 GLRX3O76003 335 aaKnown RBP20.97■□□□□ 0.95
HDDC3-206ENST00000561036 IL15P40933 162 aaPredicted RBP20.97■□□□□ 0.95
HDDC3-206ENST00000561036 MFAP1P55081 439 aaKnown RBP20.97■□□□□ 0.95
HDDC3-206ENST00000561036 AACSQ86V21 672 aa20.97■□□□□ 0.95
HDDC3-206ENST00000561036 KLHDC4Q8TBB5 520 aa20.97■□□□□ 0.95
HDDC3-206ENST00000561036 ECHDC1Q9NTX5 307 aa20.97■□□□□ 0.95
HDDC3-206ENST00000561036 CHMP3Q9Y3E7 222 aa20.97■□□□□ 0.95
HDDC3-206ENST00000561036 UBN2Q6ZU65 1347 aa20.97■□□□□ 0.95
HDDC3-206ENST00000561036 CCDC57Q2TAC2 916 aa20.96■□□□□ 0.95
HDDC3-206ENST00000561036 UTP14AQ9BVJ6 771 aaKnown RBP20.96■□□□□ 0.95
HDDC3-206ENST00000561036 GPR108Q9NPR9 543 aa20.96■□□□□ 0.95
HDDC3-206ENST00000561036 BRWD3Q6RI45 1802 aa20.96■□□□□ 0.95
HDDC3-206ENST00000561036 IRS4O14654 1257 aaPredicted RBP20.95■□□□□ 0.94
HDDC3-206ENST00000561036 PDE8AO60658 829 aa20.95■□□□□ 0.94
HDDC3-206ENST00000561036 EAF2Q96CJ1 260 aaPredicted RBP20.95■□□□□ 0.94
HDDC3-206ENST00000561036 C22orf23Q9BZE7 217 aa20.95■□□□□ 0.94
HDDC3-206ENST00000561036 EYA2O00167 538 aa20.94■□□□□ 0.94
HDDC3-206ENST00000561036 CTSWP56202 376 aa20.94■□□□□ 0.94
HDDC3-206ENST00000561036 TSHZ3Q63HK5 1081 aa20.94■□□□□ 0.94
HDDC3-206ENST00000561036 NARFQ9UHQ1 456 aa20.94■□□□□ 0.94
HDDC3-206ENST00000561036 SH3TC1Q8TE82 1336 aa20.94■□□□□ 0.94
HDDC3-206ENST00000561036 TAF1LQ8IZX4 1826 aa20.94■□□□□ 0.94
HDDC3-206ENST00000561036 RBM25P49756 843 aaKnown RBP20.93■□□□□ 0.94
HDDC3-206ENST00000561036 IFIT5Q13325 482 aaKnown RBP20.93■□□□□ 0.94
HDDC3-206ENST00000561036 SLC27A3Q5K4L6 730 aa20.93■□□□□ 0.94
HDDC3-206ENST00000561036 SUSD4Q5VX71 490 aa20.93■□□□□ 0.94
HDDC3-206ENST00000561036 ATG9AQ7Z3C6 839 aa20.93■□□□□ 0.94
HDDC3-206ENST00000561036 TTLL11Q8NHH1 800 aa20.93■□□□□ 0.94
HDDC3-206ENST00000561036 NIP7Q9Y221 180 aaKnown RBP eCLIP20.93■□□□□ 0.94
HDDC3-206ENST00000561036 RTCBQ9Y3I0 505 aaKnown RBP20.93■□□□□ 0.94
HDDC3-206ENST00000561036 SCN7AQ01118 1682 aa20.93■□□□□ 0.94
HDDC3-206ENST00000561036 TRIM6-TRIM34B2RNG4 842 aa20.92■□□□□ 0.94
HDDC3-206ENST00000561036 KCNQ4P56696 695 aa20.92■□□□□ 0.94
HDDC3-206ENST00000561036 TFCP2Q12800 502 aa20.92■□□□□ 0.94
HDDC3-206ENST00000561036 TNNI3KQ59H18 835 aa20.92■□□□□ 0.94
HDDC3-206ENST00000561036 CNTROBQ8N137 903 aa20.92■□□□□ 0.94
HDDC3-206ENST00000561036 FPGT-TNNI3KV9GXZ4 949 aa20.92■□□□□ 0.94
HDDC3-206ENST00000561036 GNPATO15228 680 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms