RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 CCDC87Q9NVE4 849 aa15.84■□□□□ 0.13
SNX1-211ENST00000560829 ZNF330Q9Y3S2 320 aaPredicted RBP15.84■□□□□ 0.13
SNX1-211ENST00000560829 ATRNO75882 1429 aa15.84■□□□□ 0.13
SNX1-211ENST00000560829 RREB1Q92766 1687 aa15.84■□□□□ 0.13
SNX1-211ENST00000560829 PCCAP05165 728 aaPredicted RBP15.84■□□□□ 0.13
SNX1-211ENST00000560829 TSHZ3Q63HK5 1081 aa15.84■□□□□ 0.13
SNX1-211ENST00000560829 AFF2P51816 1311 aa15.84■□□□□ 0.13
SNX1-211ENST00000560829 ITPK1Q13572 414 aa15.83■□□□□ 0.12
SNX1-211ENST00000560829 LMBR1LQ6UX01 489 aa15.83■□□□□ 0.12
SNX1-211ENST00000560829 ZNF831Q5JPB2 1677 aa15.83■□□□□ 0.12
SNX1-211ENST00000560829 CRKLP46109 303 aaKnown RBP15.82■□□□□ 0.12
SNX1-211ENST00000560829 HLFQ16534 295 aa15.82■□□□□ 0.12
SNX1-211ENST00000560829 PLA2G12BQ9BX93 195 aa15.82■□□□□ 0.12
SNX1-211ENST00000560829 A0A0G2JS52 829 aa15.82■□□□□ 0.12
SNX1-211ENST00000560829 ERICH6Q7L0X2 663 aa15.82■□□□□ 0.12
SNX1-211ENST00000560829 DZIP3Q86Y13 1208 aaKnown RBP15.82■□□□□ 0.12
SNX1-211ENST00000560829 ZBTB38Q8NAP3 1195 aaPredicted RBP15.82■□□□□ 0.12
SNX1-211ENST00000560829 TRPC5Q9UL62 973 aaPredicted RBP15.82■□□□□ 0.12
SNX1-211ENST00000560829 CDHR2Q9BYE9 1310 aa15.82■□□□□ 0.12
SNX1-211ENST00000560829 GLRX3O76003 335 aaKnown RBP15.81■□□□□ 0.12
SNX1-211ENST00000560829 NLRP10Q86W26 655 aa15.81■□□□□ 0.12
SNX1-211ENST00000560829 KLHDC4Q8TBB5 520 aa15.81■□□□□ 0.12
SNX1-211ENST00000560829 ERC2O15083 957 aa15.8■□□□□ 0.12
SNX1-211ENST00000560829 IFIT2P09913 472 aaKnown RBP15.8■□□□□ 0.12
SNX1-211ENST00000560829 EAF2Q96CJ1 260 aaPredicted RBP15.8■□□□□ 0.12
SNX1-211ENST00000560829 ECHDC1Q9NTX5 307 aa15.8■□□□□ 0.12
SNX1-211ENST00000560829 TUBGCP6Q96RT7 1819 aa15.8■□□□□ 0.12
SNX1-211ENST00000560829 MYT1Q01538 1121 aa15.8■□□□□ 0.12
SNX1-211ENST00000560829 BECN1Q14457 450 aa15.8■□□□□ 0.12
SNX1-211ENST00000560829 GPATCH3Q96I76 525 aa15.8■□□□□ 0.12
SNX1-211ENST00000560829 SIL1Q9H173 461 aa15.8■□□□□ 0.12
SNX1-211ENST00000560829 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.8■□□□□ 0.12
SNX1-211ENST00000560829 AACSQ86V21 672 aa15.79■□□□□ 0.12
SNX1-211ENST00000560829 ZNF34Q8IZ26 560 aa15.79■□□□□ 0.12
SNX1-211ENST00000560829 TRIM6-TRIM34B2RNG4 842 aa15.78■□□□□ 0.12
SNX1-211ENST00000560829 CSF1RP07333 972 aa15.78■□□□□ 0.12
SNX1-211ENST00000560829 CHMLP26374 656 aa15.78■□□□□ 0.12
SNX1-211ENST00000560829 RTL5Q5HYW3 569 aaPredicted RBP15.78■□□□□ 0.12
SNX1-211ENST00000560829 DAXXQ9UER7 740 aaPredicted RBP15.78■□□□□ 0.12
SNX1-211ENST00000560829 TBC1D2BQ9UPU7 963 aa15.78■□□□□ 0.12
SNX1-211ENST00000560829 REC8O95072 547 aa15.78■□□□□ 0.12
SNX1-211ENST00000560829 ARXQ96QS3 562 aa15.78■□□□□ 0.12
SNX1-211ENST00000560829 USP26Q9BXU7 913 aa15.78■□□□□ 0.12
SNX1-211ENST00000560829 FBXO3Q9UK99 471 aa15.78■□□□□ 0.12
SNX1-211ENST00000560829 NHSQ6T4R5 1651 aa15.77■□□□□ 0.12
SNX1-211ENST00000560829 CIAO1O76071 339 aa15.77■□□□□ 0.11
SNX1-211ENST00000560829 CNTROBQ8N137 903 aa15.77■□□□□ 0.11
SNX1-211ENST00000560829 RILPL2Q969X0 211 aa15.77■□□□□ 0.11
SNX1-211ENST00000560829 FAM89AQ96GI7 184 aa15.77■□□□□ 0.11
SNX1-211ENST00000560829 KIF2CQ99661 725 aa15.77■□□□□ 0.11
SNX1-211ENST00000560829 CNTNAP4Q9C0A0 1308 aa15.76■□□□□ 0.11
SNX1-211ENST00000560829 RGL2O15211 777 aa15.76■□□□□ 0.11
SNX1-211ENST00000560829 CAMTA2O94983 1202 aa15.76■□□□□ 0.11
SNX1-211ENST00000560829 ATG9AQ7Z3C6 839 aa15.76■□□□□ 0.11
SNX1-211ENST00000560829 ESYT1Q9BSJ8 1104 aa15.76■□□□□ 0.11
SNX1-211ENST00000560829 GPR108Q9NPR9 543 aa15.76■□□□□ 0.11
SNX1-211ENST00000560829 COL5A3P25940 1745 aaPredicted RBP15.76■□□□□ 0.11
SNX1-211ENST00000560829 UBN2Q6ZU65 1347 aa15.76■□□□□ 0.11
SNX1-211ENST00000560829 GPTP24298 496 aa15.76■□□□□ 0.11
SNX1-211ENST00000560829 IL15P40933 162 aaPredicted RBP15.76■□□□□ 0.11
SNX1-211ENST00000560829 SLC4A3P48751 1232 aa15.76■□□□□ 0.11
SNX1-211ENST00000560829 TFCP2Q12800 502 aa15.76■□□□□ 0.11
SNX1-211ENST00000560829 TNNI3KQ59H18 835 aa15.76■□□□□ 0.11
SNX1-211ENST00000560829 LINC00116Q8NCU8 138 aa15.76■□□□□ 0.11
SNX1-211ENST00000560829 CHMP3Q9Y3E7 222 aa15.76■□□□□ 0.11
SNX1-211ENST00000560829 FPGT-TNNI3KV9GXZ4 949 aa15.76■□□□□ 0.11
SNX1-211ENST00000560829 EYA2O00167 538 aa15.75■□□□□ 0.11
SNX1-211ENST00000560829 EPB41L2O43491 1005 aaKnown RBP15.75■□□□□ 0.11
SNX1-211ENST00000560829 PTF1AQ7RTS3 328 aa15.75■□□□□ 0.11
SNX1-211ENST00000560829 SEPT12Q8IYM1 358 aa15.75■□□□□ 0.11
SNX1-211ENST00000560829 TBC1D2Q9BYX2 928 aa15.75■□□□□ 0.11
SNX1-211ENST00000560829 CCDC8Q9H0W5 538 aaPredicted RBP15.75■□□□□ 0.11
SNX1-211ENST00000560829 ANKRD36CQ5JPF3 1778 aa15.75■□□□□ 0.11
SNX1-211ENST00000560829 RC3H1Q5TC82 1133 aaKnown RBP15.74■□□□□ 0.11
SNX1-211ENST00000560829 SNX21Q969T3 373 aa15.74■□□□□ 0.11
SNX1-211ENST00000560829 AK7Q96M32 723 aa15.74■□□□□ 0.11
SNX1-211ENST00000560829 TLR7Q9NYK1 1049 aaKnown RBP15.74■□□□□ 0.11
SNX1-211ENST00000560829 CCDC57Q2TAC2 916 aa15.74■□□□□ 0.11
SNX1-211ENST00000560829 PARP10Q53GL7 1025 aa15.74■□□□□ 0.11
SNX1-211ENST00000560829 TRMT112Q9UI30 125 aaKnown RBP15.74■□□□□ 0.11
SNX1-211ENST00000560829 EVI5LQ96CN4 794 aa15.73■□□□□ 0.11
SNX1-211ENST00000560829 QTRT2Q9H974 415 aaKnown RBP15.73■□□□□ 0.11
SNX1-211ENST00000560829 DBNLQ9UJU6 430 aaKnown RBP15.73■□□□□ 0.11
SNX1-211ENST00000560829 IRS4O14654 1257 aaPredicted RBP15.72■□□□□ 0.11
SNX1-211ENST00000560829 PDE8AO60658 829 aa15.72■□□□□ 0.11
SNX1-211ENST00000560829 CTSWP56202 376 aa15.72■□□□□ 0.11
SNX1-211ENST00000560829 CLEC4GQ6UXB4 293 aa15.72■□□□□ 0.11
SNX1-211ENST00000560829 TTLL11Q8NHH1 800 aa15.72■□□□□ 0.11
SNX1-211ENST00000560829 MAP4K4O95819 1239 aaPredicted RBP15.71■□□□□ 0.11
SNX1-211ENST00000560829 ATP5JP18859 108 aa15.71■□□□□ 0.11
SNX1-211ENST00000560829 SYNE4Q8N205 404 aa15.71■□□□□ 0.11
SNX1-211ENST00000560829 ZNF652Q9Y2D9 606 aa15.71■□□□□ 0.11
SNX1-211ENST00000560829 KAT6BQ8WYB5 2073 aa15.71■□□□□ 0.11
SNX1-211ENST00000560829 IFIT5Q13325 482 aaKnown RBP15.71■□□□□ 0.11
SNX1-211ENST00000560829 LRRC24Q50LG9 513 aa15.71■□□□□ 0.11
SNX1-211ENST00000560829 ZNF594Q96JF6 807 aaPredicted RBP15.71■□□□□ 0.11
SNX1-211ENST00000560829 MYH14Q7Z406 1995 aaKnown RBP15.7■□□□□ 0.1
SNX1-211ENST00000560829 FAM182BQ5T319 152 aa15.7■□□□□ 0.1
SNX1-211ENST00000560829 SUSD4Q5VX71 490 aa15.7■□□□□ 0.1
SNX1-211ENST00000560829 ANP32EQ9BTT0 268 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms