RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 RBM8AQ9Y5S9 174 aaKnown RBP21.14■□□□□ 0.97
TRPM1-211ENST00000560658 SASH1O94885 1247 aa21.13■□□□□ 0.97
TRPM1-211ENST00000560658 KCNJ4P48050 445 aa21.13■□□□□ 0.97
TRPM1-211ENST00000560658 PTH1RQ03431 593 aa21.13■□□□□ 0.97
TRPM1-211ENST00000560658 RIC3Q7Z5B4 369 aa21.13■□□□□ 0.97
TRPM1-211ENST00000560658 RAPGEF4Q8WZA2 1011 aa21.13■□□□□ 0.97
TRPM1-211ENST00000560658 BICC1Q9H694 974 aaKnown RBP21.13■□□□□ 0.97
TRPM1-211ENST00000560658 MTMR6Q9Y217 621 aa21.13■□□□□ 0.97
TRPM1-211ENST00000560658 ELP1O95163 1332 aa21.13■□□□□ 0.97
TRPM1-211ENST00000560658 ERBB3P21860 1342 aa21.13■□□□□ 0.97
TRPM1-211ENST00000560658 PROSER3Q2NL68 480 aa21.12■□□□□ 0.97
TRPM1-211ENST00000560658 CWF19L2Q2TBE0 894 aaKnown RBP21.12■□□□□ 0.97
TRPM1-211ENST00000560658 ZNF790Q6PG37 636 aa21.12■□□□□ 0.97
TRPM1-211ENST00000560658 METTL22Q9BUU2 404 aaPredicted RBP21.12■□□□□ 0.97
TRPM1-211ENST00000560658 SLC52A2Q9HAB3 445 aa21.12■□□□□ 0.97
TRPM1-211ENST00000560658 COPRSQ9NQ92 184 aa21.12■□□□□ 0.97
TRPM1-211ENST00000560658 CNPY2Q9Y2B0 182 aa21.12■□□□□ 0.97
TRPM1-211ENST00000560658 MED23Q9ULK4 1368 aa21.12■□□□□ 0.97
TRPM1-211ENST00000560658 PTMAP06454 111 aaKnown RBP21.11■□□□□ 0.97
TRPM1-211ENST00000560658 TPM3P06753 285 aa21.11■□□□□ 0.97
TRPM1-211ENST00000560658 HSP90AA2PQ14568 343 aaPredicted RBP21.11■□□□□ 0.97
TRPM1-211ENST00000560658 PDIA6Q15084 440 aa21.11■□□□□ 0.97
TRPM1-211ENST00000560658 KRT28Q7Z3Y7 464 aa21.11■□□□□ 0.97
TRPM1-211ENST00000560658 CHAMP1Q96JM3 812 aa21.11■□□□□ 0.97
TRPM1-211ENST00000560658 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.11■□□□□ 0.97
TRPM1-211ENST00000560658 TATP17735 454 aaPredicted RBP21.11■□□□□ 0.97
TRPM1-211ENST00000560658 BLOC1S2Q6QNY1 142 aa21.11■□□□□ 0.97
TRPM1-211ENST00000560658 CCDC83Q8IWF9 413 aa21.11■□□□□ 0.97
TRPM1-211ENST00000560658 EAF2Q96CJ1 260 aaPredicted RBP21.11■□□□□ 0.97
TRPM1-211ENST00000560658 KAZALD1Q96I82 304 aa21.11■□□□□ 0.97
TRPM1-211ENST00000560658 PA2G4Q9UQ80 394 aaKnown RBP21.11■□□□□ 0.97
TRPM1-211ENST00000560658 NPHP3Q7Z494 1330 aa21.1■□□□□ 0.97
TRPM1-211ENST00000560658 NEURL1BA8MQ27 555 aa21.1■□□□□ 0.97
TRPM1-211ENST00000560658 SLC27A2O14975 620 aa21.1■□□□□ 0.97
TRPM1-211ENST00000560658 NMIQ13287 307 aaPredicted RBP21.1■□□□□ 0.97
TRPM1-211ENST00000560658 GCKRQ14397 625 aa21.1■□□□□ 0.97
TRPM1-211ENST00000560658 UBE2Q2Q8WVN8 375 aa21.1■□□□□ 0.97
TRPM1-211ENST00000560658 SETD1BQ9UPS6 1966 aaKnown RBP21.1■□□□□ 0.97
TRPM1-211ENST00000560658 SCN11AQ9UI33 1791 aa21.1■□□□□ 0.97
TRPM1-211ENST00000560658 ATP5JP18859 108 aa21.09■□□□□ 0.97
TRPM1-211ENST00000560658 KRT85P78386 507 aa21.09■□□□□ 0.97
TRPM1-211ENST00000560658 RNF214Q8ND24 703 aa21.09■□□□□ 0.97
TRPM1-211ENST00000560658 MAP7D2Q96T17 732 aa21.09■□□□□ 0.97
TRPM1-211ENST00000560658 FSD1Q9BTV5 496 aa21.09■□□□□ 0.97
TRPM1-211ENST00000560658 IGKV5-2P06315 115 aa21.08■□□□□ 0.97
TRPM1-211ENST00000560658 KIAA2012Q0VF49 1180 aa21.08■□□□□ 0.97
TRPM1-211ENST00000560658 GDPD2Q9HCC8 539 aa21.08■□□□□ 0.97
TRPM1-211ENST00000560658 C1orf167Q5SNV9 1468 aa21.08■□□□□ 0.97
TRPM1-211ENST00000560658 RPS6KB1P23443 525 aa21.07■□□□□ 0.96
TRPM1-211ENST00000560658 ADCK5Q3MIX3 580 aa21.07■□□□□ 0.96
TRPM1-211ENST00000560658 USPL1Q5W0Q7 1092 aa21.07■□□□□ 0.96
TRPM1-211ENST00000560658 IFNL2Q8IZJ0 200 aa21.07■□□□□ 0.96
TRPM1-211ENST00000560658 ORAI2Q96SN7 254 aa21.07■□□□□ 0.96
TRPM1-211ENST00000560658 ALS2Q96Q42 1657 aa21.07■□□□□ 0.96
TRPM1-211ENST00000560658 SNRPA1P09661 255 aaKnown RBP21.07■□□□□ 0.96
TRPM1-211ENST00000560658 ME3Q16798 604 aa21.07■□□□□ 0.96
TRPM1-211ENST00000560658 CHMP4CQ96CF2 233 aa21.07■□□□□ 0.96
TRPM1-211ENST00000560658 SCAND2PQ9GZW5 306 aaPredicted RBP21.07■□□□□ 0.96
TRPM1-211ENST00000560658 PHKG2P15735 406 aa21.06■□□□□ 0.96
TRPM1-211ENST00000560658 RABL6Q3YEC7 729 aaPredicted RBP21.06■□□□□ 0.96
TRPM1-211ENST00000560658 LARP1BQ659C4 914 aaKnown RBP21.06■□□□□ 0.96
TRPM1-211ENST00000560658 U3KPZ7 1027 aaPredicted RBP21.06■□□□□ 0.96
TRPM1-211ENST00000560658 KDM6AO15550 1401 aaPredicted RBP21.05■□□□□ 0.96
TRPM1-211ENST00000560658 LARGE1O95461 756 aa21.05■□□□□ 0.96
TRPM1-211ENST00000560658 MTERF4Q7Z6M4 381 aaKnown RBP21.05■□□□□ 0.96
TRPM1-211ENST00000560658 DCAF5Q96JK2 942 aa21.05■□□□□ 0.96
TRPM1-211ENST00000560658 FUCA2Q9BTY2 467 aa21.05■□□□□ 0.96
TRPM1-211ENST00000560658 C19orf44Q9H6X5 657 aa21.05■□□□□ 0.96
TRPM1-211ENST00000560658 DCCP43146 1447 aa21.05■□□□□ 0.96
TRPM1-211ENST00000560658 FIBPO43427 364 aa21.04■□□□□ 0.96
TRPM1-211ENST00000560658 ANKRD13DQ6ZTN6 518 aa21.04■□□□□ 0.96
TRPM1-211ENST00000560658 CCDC8Q9H0W5 538 aaPredicted RBP21.04■□□□□ 0.96
TRPM1-211ENST00000560658 KDM4AO75164 1064 aa21.04■□□□□ 0.96
TRPM1-211ENST00000560658 CCDC192P0DO97 292 aa21.04■□□□□ 0.96
TRPM1-211ENST00000560658 AIMP1Q12904 312 aaKnown RBP21.04■□□□□ 0.96
TRPM1-211ENST00000560658 SASS6Q6UVJ0 657 aa21.04■□□□□ 0.96
TRPM1-211ENST00000560658 TTC5Q8N0Z6 440 aa21.04■□□□□ 0.96
TRPM1-211ENST00000560658 XAGE3Q8WTP9 111 aa21.04■□□□□ 0.96
TRPM1-211ENST00000560658 FAM227BQ96M60 508 aa21.04■□□□□ 0.96
TRPM1-211ENST00000560658 FMNL2Q96PY5 1086 aa21.04■□□□□ 0.96
TRPM1-211ENST00000560658 PDCL3Q9H2J4 239 aa21.04■□□□□ 0.96
TRPM1-211ENST00000560658 TPCN1Q9ULQ1 816 aa21.04■□□□□ 0.96
TRPM1-211ENST00000560658 AXIN2Q9Y2T1 843 aa21.04■□□□□ 0.96
TRPM1-211ENST00000560658 STRCQ7RTU9 1775 aa21.03■□□□□ 0.96
TRPM1-211ENST00000560658 DNM1Q05193 864 aaKnown RBP21.03■□□□□ 0.96
TRPM1-211ENST00000560658 FOXD4L6Q3SYB3 417 aaPredicted RBP21.03■□□□□ 0.96
TRPM1-211ENST00000560658 FOXD4L3Q6VB84 417 aaPredicted RBP21.03■□□□□ 0.96
TRPM1-211ENST00000560658 USP25Q9UHP3 1055 aa21.03■□□□□ 0.96
TRPM1-211ENST00000560658 VPS37CA5D8V6 355 aaPredicted RBP21.02■□□□□ 0.96
TRPM1-211ENST00000560658 DYNC1I1O14576 645 aa21.02■□□□□ 0.96
TRPM1-211ENST00000560658 HMGB1P09429 215 aaKnown RBP21.02■□□□□ 0.96
TRPM1-211ENST00000560658 LMOD2Q6P5Q4 547 aa21.02■□□□□ 0.96
TRPM1-211ENST00000560658 COPS6Q7L5N1 327 aa21.02■□□□□ 0.96
TRPM1-211ENST00000560658 MYD88Q99836 296 aa21.02■□□□□ 0.96
TRPM1-211ENST00000560658 BOLA2Q9H3K6 86 aa21.02■□□□□ 0.96
TRPM1-211ENST00000560658 C5P01031 1676 aa21.02■□□□□ 0.96
TRPM1-211ENST00000560658 A0A0D9SFI3 127 aa21.01■□□□□ 0.95
TRPM1-211ENST00000560658 PRAMEF22A3QJZ6 481 aa21.01■□□□□ 0.95
TRPM1-211ENST00000560658 GOLGA6L6A8MZA4 724 aa21.01■□□□□ 0.95
TRPM1-211ENST00000560658 TAF5LO75529 589 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms