RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 TXNRD1Q16881 649 aa10.71□□□□□ -0.69
TRAF3-209ENST00000560463 PARP10Q53GL7 1025 aa10.71□□□□□ -0.69
TRAF3-209ENST00000560463 UBE3BQ7Z3V4 1068 aa10.71□□□□□ -0.69
TRAF3-209ENST00000560463 PPP1R42Q7Z4L9 355 aa10.71□□□□□ -0.69
TRAF3-209ENST00000560463 AK7Q96M32 723 aa10.71□□□□□ -0.69
TRAF3-209ENST00000560463 CDHR2Q9BYE9 1310 aa10.71□□□□□ -0.69
TRAF3-209ENST00000560463 LRRC4BQ9NT99 713 aa10.71□□□□□ -0.69
TRAF3-209ENST00000560463 ZBTB47Q9UFB7 747 aaPredicted RBP10.71□□□□□ -0.69
TRAF3-209ENST00000560463 NARFQ9UHQ1 456 aa10.71□□□□□ -0.69
TRAF3-209ENST00000560463 PDZRN3Q9UPQ7 1066 aa10.71□□□□□ -0.69
TRAF3-209ENST00000560463 TAF1P21675 1872 aa10.7□□□□□ -0.7
TRAF3-209ENST00000560463 PNMA6EA0A0J9YXQ4 647 aa10.7□□□□□ -0.7
TRAF3-209ENST00000560463 GNPATO15228 680 aa10.7□□□□□ -0.7
TRAF3-209ENST00000560463 SRGAP3O43295 1099 aa10.7□□□□□ -0.7
TRAF3-209ENST00000560463 KCNQ4P56696 695 aa10.7□□□□□ -0.7
TRAF3-209ENST00000560463 RABL6Q3YEC7 729 aaPredicted RBP10.7□□□□□ -0.7
TRAF3-209ENST00000560463 HSP90AB4PQ58FF6 505 aa10.7□□□□□ -0.7
TRAF3-209ENST00000560463 NLRP10Q86W26 655 aa10.7□□□□□ -0.7
TRAF3-209ENST00000560463 ZBTB38Q8NAP3 1195 aaPredicted RBP10.7□□□□□ -0.7
TRAF3-209ENST00000560463 KAZALD1Q96I82 304 aa10.7□□□□□ -0.7
TRAF3-209ENST00000560463 SUCLG2Q96I99 432 aa10.7□□□□□ -0.7
TRAF3-209ENST00000560463 BICC1Q9H694 974 aaKnown RBP10.7□□□□□ -0.7
TRAF3-209ENST00000560463 RAB11FIP3O75154 756 aa10.69□□□□□ -0.7
TRAF3-209ENST00000560463 ZPR1O75312 459 aa10.69□□□□□ -0.7
TRAF3-209ENST00000560463 HSP90B1P14625 803 aaKnown RBP10.69□□□□□ -0.7
TRAF3-209ENST00000560463 SSFA2P28290 1259 aa10.69□□□□□ -0.7
TRAF3-209ENST00000560463 TRAPPC3LQ5T215 181 aa10.69□□□□□ -0.7
TRAF3-209ENST00000560463 CHD1LQ86WJ1 897 aa10.69□□□□□ -0.7
TRAF3-209ENST00000560463 PLA2G12BQ9BX93 195 aa10.69□□□□□ -0.7
TRAF3-209ENST00000560463 NRXN2Q9P2S2 1712 aa10.68□□□□□ -0.7
TRAF3-209ENST00000560463 ANKRD45Q5TZF3 282 aa10.68□□□□□ -0.7
TRAF3-209ENST00000560463 PROM2Q8N271 834 aa10.68□□□□□ -0.7
TRAF3-209ENST00000560463 TRMT112Q9UI30 125 aaKnown RBP10.68□□□□□ -0.7
TRAF3-209ENST00000560463 NOP58Q9Y2X3 529 aaKnown RBP10.68□□□□□ -0.7
TRAF3-209ENST00000560463 MYH13Q9UKX3 1938 aa10.68□□□□□ -0.7
TRAF3-209ENST00000560463 UBN2Q6ZU65 1347 aa10.67□□□□□ -0.7
TRAF3-209ENST00000560463 USP42Q9H9J4 1324 aaKnown RBP10.67□□□□□ -0.7
TRAF3-209ENST00000560463 MYH7P12883 1935 aa10.67□□□□□ -0.7
TRAF3-209ENST00000560463 GPTP24298 496 aa10.67□□□□□ -0.7
TRAF3-209ENST00000560463 RFC4P35249 363 aa10.67□□□□□ -0.7
TRAF3-209ENST00000560463 FOXO4P98177 505 aa10.67□□□□□ -0.7
TRAF3-209ENST00000560463 ILDR1Q86SU0 546 aaPredicted RBP10.67□□□□□ -0.7
TRAF3-209ENST00000560463 ERC1Q8IUD2 1116 aa10.67□□□□□ -0.7
TRAF3-209ENST00000560463 FLAD1Q8NFF5 587 aa10.67□□□□□ -0.7
TRAF3-209ENST00000560463 ARHGEF1Q92888 912 aaKnown RBP10.67□□□□□ -0.7
TRAF3-209ENST00000560463 LRRCC1Q9C099 1032 aa10.67□□□□□ -0.7
TRAF3-209ENST00000560463 NIP7Q9Y221 180 aaKnown RBP eCLIP10.67□□□□□ -0.7
TRAF3-209ENST00000560463 SH3TC1Q8TE82 1336 aa10.66□□□□□ -0.7
TRAF3-209ENST00000560463 SURF6O75683 361 aaKnown RBP10.66□□□□□ -0.7
TRAF3-209ENST00000560463 RGS3P49796 1198 aa10.66□□□□□ -0.7
TRAF3-209ENST00000560463 SF3B2Q13435 895 aaKnown RBP10.66□□□□□ -0.7
TRAF3-209ENST00000560463 CCDC125Q86Z20 511 aa10.66□□□□□ -0.7
TRAF3-209ENST00000560463 FAM89AQ96GI7 184 aa10.66□□□□□ -0.7
TRAF3-209ENST00000560463 UTP14AQ9BVJ6 771 aaKnown RBP10.66□□□□□ -0.7
TRAF3-209ENST00000560463 NYXQ9GZU5 481 aa10.66□□□□□ -0.7
TRAF3-209ENST00000560463 COPRSQ9NQ92 184 aa10.66□□□□□ -0.7
TRAF3-209ENST00000560463 ARAP2Q8WZ64 1704 aa10.66□□□□□ -0.7
TRAF3-209ENST00000560463 ANKRD31Q8N7Z5 1873 aa10.66□□□□□ -0.7
TRAF3-209ENST00000560463 PDE8AO60658 829 aa10.65□□□□□ -0.7
TRAF3-209ENST00000560463 CSF1RP07333 972 aa10.65□□□□□ -0.7
TRAF3-209ENST00000560463 EPHA10Q5JZY3 1008 aa10.65□□□□□ -0.7
TRAF3-209ENST00000560463 USPL1Q5W0Q7 1092 aa10.65□□□□□ -0.7
TRAF3-209ENST00000560463 LMBR1LQ6UX01 489 aa10.65□□□□□ -0.7
TRAF3-209ENST00000560463 KIF1BPQ96EK5 621 aa10.65□□□□□ -0.7
TRAF3-209ENST00000560463 SETDB2Q96T68 719 aa10.65□□□□□ -0.7
TRAF3-209ENST00000560463 LNPKQ9C0E8 428 aa10.65□□□□□ -0.7
TRAF3-209ENST00000560463 BCL2L12Q9HB09 334 aa10.65□□□□□ -0.7
TRAF3-209ENST00000560463 FBXO3Q9UK99 471 aa10.65□□□□□ -0.7
TRAF3-209ENST00000560463 EXOC6BQ9Y2D4 811 aa10.65□□□□□ -0.7
TRAF3-209ENST00000560463 CACNA1SQ13698 1873 aa10.65□□□□□ -0.7
TRAF3-209ENST00000560463 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.64□□□□□ -0.71
TRAF3-209ENST00000560463 IRS4O14654 1257 aaPredicted RBP10.64□□□□□ -0.71
TRAF3-209ENST00000560463 NTSR2O95665 410 aa10.64□□□□□ -0.71
TRAF3-209ENST00000560463 PDE4AP27815 886 aa10.64□□□□□ -0.71
TRAF3-209ENST00000560463 BAG6P46379 1132 aa10.64□□□□□ -0.71
TRAF3-209ENST00000560463 G3BP1Q13283 466 aaKnown RBP eCLIP10.64□□□□□ -0.71
TRAF3-209ENST00000560463 RTL5Q5HYW3 569 aaPredicted RBP10.64□□□□□ -0.71
TRAF3-209ENST00000560463 SUSD4Q5VX71 490 aa10.64□□□□□ -0.71
TRAF3-209ENST00000560463 JARID2Q92833 1246 aaPredicted RBP10.64□□□□□ -0.71
TRAF3-209ENST00000560463 AKT1S1Q96B36 256 aa10.64□□□□□ -0.71
TRAF3-209ENST00000560463 CAMKK2Q96RR4 588 aa10.64□□□□□ -0.71
TRAF3-209ENST00000560463 CARMIL3Q8ND23 1372 aa10.64□□□□□ -0.71
TRAF3-209ENST00000560463 PHF14O94880 888 aa10.63□□□□□ -0.71
TRAF3-209ENST00000560463 RFX5P48382 616 aaPredicted RBP10.63□□□□□ -0.71
TRAF3-209ENST00000560463 PTPN12Q05209 780 aaKnown RBP10.63□□□□□ -0.71
TRAF3-209ENST00000560463 OS9Q13438 667 aaPredicted RBP10.63□□□□□ -0.71
TRAF3-209ENST00000560463 CCDC57Q2TAC2 916 aa10.63□□□□□ -0.71
TRAF3-209ENST00000560463 TBC1D9BQ66K14 1250 aa10.63□□□□□ -0.71
TRAF3-209ENST00000560463 TTLL11Q8NHH1 800 aa10.63□□□□□ -0.71
TRAF3-209ENST00000560463 RHPN1Q8TCX5 695 aa10.63□□□□□ -0.71
TRAF3-209ENST00000560463 TFCP2L1Q9NZI6 479 aa10.63□□□□□ -0.71
TRAF3-209ENST00000560463 SRP68Q9UHB9 627 aaKnown RBP10.63□□□□□ -0.71
TRAF3-209ENST00000560463 RIC1Q4ADV7 1423 aa10.63□□□□□ -0.71
TRAF3-209ENST00000560463 RTL9Q8NET4 1388 aa10.63□□□□□ -0.71
TRAF3-209ENST00000560463 AKAP11Q9UKA4 1901 aa10.62□□□□□ -0.71
TRAF3-209ENST00000560463 LRP5O75197 1615 aa10.62□□□□□ -0.71
TRAF3-209ENST00000560463 APBB1O00213 710 aa10.62□□□□□ -0.71
TRAF3-209ENST00000560463 CTSWP56202 376 aa10.62□□□□□ -0.71
TRAF3-209ENST00000560463 SLC10A5Q5PT55 438 aa10.62□□□□□ -0.71
TRAF3-209ENST00000560463 TPTE2Q6XPS3 522 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms