RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 HYAL3O43820 417 aaPredicted RBP7.14□□□□□ -1.27
SPG11-222ENST00000560435 TBC1D8BQ0IIM8 1120 aa7.14□□□□□ -1.27
SPG11-222ENST00000560435 CCDC102BQ68D86 513 aa7.14□□□□□ -1.27
SPG11-222ENST00000560435 ILDR2Q71H61 639 aa7.14□□□□□ -1.27
SPG11-222ENST00000560435 PLEKHM2Q8IWE5 1019 aa7.14□□□□□ -1.27
SPG11-222ENST00000560435 FMR1NBQ8N0W7 255 aaPredicted RBP7.14□□□□□ -1.27
SPG11-222ENST00000560435 TP53INP1Q96A56 240 aa7.14□□□□□ -1.27
SPG11-222ENST00000560435 SSBP4Q9BWG4 385 aaPredicted RBP7.14□□□□□ -1.27
SPG11-222ENST00000560435 CLDN10P78369 228 aa7.13□□□□□ -1.27
SPG11-222ENST00000560435 NUDT8Q8WV74 236 aa7.13□□□□□ -1.27
SPG11-222ENST00000560435 AFF1P51825 1210 aaKnown RBP7.12□□□□□ -1.27
SPG11-222ENST00000560435 HIF1AQ16665 826 aa7.12□□□□□ -1.27
SPG11-222ENST00000560435 PSAPL1Q6NUJ1 521 aa7.12□□□□□ -1.27
SPG11-222ENST00000560435 BTLAQ7Z6A9 289 aa7.12□□□□□ -1.27
SPG11-222ENST00000560435 WWC1Q8IX03 1113 aa7.12□□□□□ -1.27
SPG11-222ENST00000560435 DNAJB12Q9NXW2 375 aaKnown RBP7.12□□□□□ -1.27
SPG11-222ENST00000560435 USP21Q9UK80 565 aa7.12□□□□□ -1.27
SPG11-222ENST00000560435 PPP1R12BO60237 982 aaPredicted RBP7.11□□□□□ -1.27
SPG11-222ENST00000560435 ALDH16A1Q8IZ83 802 aa7.11□□□□□ -1.27
SPG11-222ENST00000560435 STAG2Q8N3U4 1231 aa7.11□□□□□ -1.27
SPG11-222ENST00000560435 IGFLR1Q9H665 355 aa7.11□□□□□ -1.27
SPG11-222ENST00000560435 NAGPAQ9UK23 515 aa7.11□□□□□ -1.27
SPG11-222ENST00000560435 USP17L3A6NCW0 530 aa7.1□□□□□ -1.27
SPG11-222ENST00000560435 USP17L4A6NCW7 530 aa7.1□□□□□ -1.27
SPG11-222ENST00000560435 IER5Q5VY09 327 aa7.1□□□□□ -1.27
SPG11-222ENST00000560435 USP17L2Q6R6M4 530 aa7.1□□□□□ -1.27
SPG11-222ENST00000560435 USP17L1Q7RTZ2 530 aa7.1□□□□□ -1.27
SPG11-222ENST00000560435 DMRTC2Q8IXT2 367 aaPredicted RBP7.1□□□□□ -1.27
SPG11-222ENST00000560435 LARGE2Q8N3Y3 721 aa7.1□□□□□ -1.27
SPG11-222ENST00000560435 DTWD1Q8N5C7 304 aa7.1□□□□□ -1.27
SPG11-222ENST00000560435 GSX2Q9BZM3 304 aa7.1□□□□□ -1.27
SPG11-222ENST00000560435 PALM3A6NDB9 673 aaPredicted RBP7.09□□□□□ -1.27
SPG11-222ENST00000560435 C21orf2O43822 256 aa7.09□□□□□ -1.27
SPG11-222ENST00000560435 RGS9O75916 674 aaPredicted RBP7.09□□□□□ -1.27
SPG11-222ENST00000560435 SIX5Q8N196 739 aa7.09□□□□□ -1.27
SPG11-222ENST00000560435 OGFOD1Q8N543 542 aa7.09□□□□□ -1.27
SPG11-222ENST00000560435 TSEN2Q8NCE0 465 aaKnown RBP7.09□□□□□ -1.27
SPG11-222ENST00000560435 PNMA5Q96PV4 448 aa7.09□□□□□ -1.27
SPG11-222ENST00000560435 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.09□□□□□ -1.27
SPG11-222ENST00000560435 CCINQ13939 588 aa7.08□□□□□ -1.28
SPG11-222ENST00000560435 C2orf49Q9BVC5 232 aaPredicted RBP7.08□□□□□ -1.28
SPG11-222ENST00000560435 RNF112Q9ULX5 631 aa7.08□□□□□ -1.28
SPG11-222ENST00000560435 NFKB1P19838 968 aa7.07□□□□□ -1.28
SPG11-222ENST00000560435 PCSK7Q16549 785 aa7.07□□□□□ -1.28
SPG11-222ENST00000560435 MSL1Q68DK7 614 aa7.07□□□□□ -1.28
SPG11-222ENST00000560435 FBXO11Q86XK2 927 aa7.07□□□□□ -1.28
SPG11-222ENST00000560435 GAS2L2Q8NHY3 880 aa7.07□□□□□ -1.28
SPG11-222ENST00000560435 WFDC12Q8WWY7 111 aa7.07□□□□□ -1.28
SPG11-222ENST00000560435 FRRS1LQ9P0K9 344 aa7.07□□□□□ -1.28
SPG11-222ENST00000560435 TGFBR3LH3BV60 316 aa7.06□□□□□ -1.28
SPG11-222ENST00000560435 ATP9BO43861 1147 aa7.06□□□□□ -1.28
SPG11-222ENST00000560435 DKK1O94907 266 aa7.06□□□□□ -1.28
SPG11-222ENST00000560435 KRTAP19-1Q8IUB9 90 aa7.06□□□□□ -1.28
SPG11-222ENST00000560435 ADAMTS19Q8TE59 1207 aa7.06□□□□□ -1.28
SPG11-222ENST00000560435 UCN2Q96RP3 112 aa7.06□□□□□ -1.28
SPG11-222ENST00000560435 ATAD2Q6PL18 1390 aa7.06□□□□□ -1.28
SPG11-222ENST00000560435 IREB2P48200 963 aaKnown RBP7.05□□□□□ -1.28
SPG11-222ENST00000560435 GRIK5Q16478 980 aa7.05□□□□□ -1.28
SPG11-222ENST00000560435 RTN1Q16799 776 aa7.05□□□□□ -1.28
SPG11-222ENST00000560435 FAM35AQ86V20 835 aa7.05□□□□□ -1.28
SPG11-222ENST00000560435 NGLY1Q96IV0 654 aa7.05□□□□□ -1.28
SPG11-222ENST00000560435 LPIN3Q9BQK8 851 aa7.05□□□□□ -1.28
SPG11-222ENST00000560435 MKRN1Q9UHC7 482 aaKnown RBP7.05□□□□□ -1.28
SPG11-222ENST00000560435 RBM19Q9Y4C8 960 aaKnown RBP7.05□□□□□ -1.28
SPG11-222ENST00000560435 BTBD11A6QL63 1104 aa7.04□□□□□ -1.28
SPG11-222ENST00000560435 MAP3K6O95382 1288 aa7.04□□□□□ -1.28
SPG11-222ENST00000560435 NOS3P29474 1203 aa7.04□□□□□ -1.28
SPG11-222ENST00000560435 POM121Q96HA1 1249 aa7.04□□□□□ -1.28
SPG11-222ENST00000560435 ZNF594Q96JF6 807 aaPredicted RBP7.04□□□□□ -1.28
SPG11-222ENST00000560435 GOLGA2P5Q9HBQ8 144 aa7.04□□□□□ -1.28
SPG11-222ENST00000560435 DMGDHQ9UI17 866 aaKnown RBP7.04□□□□□ -1.28
SPG11-222ENST00000560435 POM121CA8CG34 1229 aa7.03□□□□□ -1.28
SPG11-222ENST00000560435 CPB1P15086 417 aa7.03□□□□□ -1.28
SPG11-222ENST00000560435 EPB42P16452 691 aa7.03□□□□□ -1.28
SPG11-222ENST00000560435 IGF2-ASQ6U949 168 aa7.03□□□□□ -1.28
SPG11-222ENST00000560435 SCG3Q8WXD2 468 aaKnown RBP7.03□□□□□ -1.28
SPG11-222ENST00000560435 TTC9Q92623 222 aa7.03□□□□□ -1.28
SPG11-222ENST00000560435 MEGF10Q96KG7 1140 aa7.03□□□□□ -1.28
SPG11-222ENST00000560435 GRNP28799 593 aaKnown RBP7.02□□□□□ -1.29
SPG11-222ENST00000560435 PERM1Q5SV97 790 aa7.02□□□□□ -1.29
SPG11-222ENST00000560435 MCTP1Q6DN14 999 aa7.02□□□□□ -1.29
SPG11-222ENST00000560435 PRR23CQ6ZRP0 262 aa7.02□□□□□ -1.29
SPG11-222ENST00000560435 WFDC8Q8IUA0 241 aa7.02□□□□□ -1.29
SPG11-222ENST00000560435 TRPM4Q8TD43 1214 aa7.02□□□□□ -1.29
SPG11-222ENST00000560435 KRTAP9-9Q9BYP9 154 aa7.02□□□□□ -1.29
SPG11-222ENST00000560435 KRTAP9-4Q9BYQ2 154 aa7.02□□□□□ -1.29
SPG11-222ENST00000560435 BCS1LQ9Y276 419 aa7.02□□□□□ -1.29
SPG11-222ENST00000560435 RAD21O60216 631 aa7.01□□□□□ -1.29
SPG11-222ENST00000560435 GPLD1P80108 840 aa7.01□□□□□ -1.29
SPG11-222ENST00000560435 ELMSAN1Q6PJG2 1045 aa7.01□□□□□ -1.29
SPG11-222ENST00000560435 DHX32Q7L7V1 743 aaKnown RBP7.01□□□□□ -1.29
SPG11-222ENST00000560435 CHMP7Q8WUX9 453 aaPredicted RBP7.01□□□□□ -1.29
SPG11-222ENST00000560435 C11orf16Q9NQ32 467 aa7.01□□□□□ -1.29
SPG11-222ENST00000560435 ZBTB42B2RXF5 422 aa7□□□□□ -1.29
SPG11-222ENST00000560435 INPP5BP32019 993 aa7□□□□□ -1.29
SPG11-222ENST00000560435 SEC13P55735 322 aa7□□□□□ -1.29
SPG11-222ENST00000560435 PLAURQ03405 335 aa7□□□□□ -1.29
SPG11-222ENST00000560435 HDGFL1Q5TGJ6 251 aa7□□□□□ -1.29
SPG11-222ENST00000560435 SLC51AQ86UW1 340 aa7□□□□□ -1.29
SPG11-222ENST00000560435 ZFATQ9P243 1243 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms