RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 PDE1AP54750 535 aa17.85■□□□□ 0.45
ZEB1-218ENST00000560196 HLFQ16534 295 aa17.85■□□□□ 0.45
ZEB1-218ENST00000560196 PTF1AQ7RTS3 328 aa17.85■□□□□ 0.45
ZEB1-218ENST00000560196 MYH14Q7Z406 1995 aaKnown RBP17.85■□□□□ 0.45
ZEB1-218ENST00000560196 ZNF34Q8IZ26 560 aa17.85■□□□□ 0.45
ZEB1-218ENST00000560196 ZBTB38Q8NAP3 1195 aaPredicted RBP17.85■□□□□ 0.45
ZEB1-218ENST00000560196 LINC00116Q8NCU8 138 aa17.85■□□□□ 0.45
ZEB1-218ENST00000560196 LY75O60449 1722 aa17.84■□□□□ 0.45
ZEB1-218ENST00000560196 CAMTA2O94983 1202 aa17.84■□□□□ 0.45
ZEB1-218ENST00000560196 KRT27Q7Z3Y8 459 aa17.84■□□□□ 0.45
ZEB1-218ENST00000560196 NLRP10Q86W26 655 aa17.84■□□□□ 0.45
ZEB1-218ENST00000560196 OTUD7AQ8TE49 926 aaPredicted RBP17.84■□□□□ 0.45
ZEB1-218ENST00000560196 GSPT1P15170 499 aaKnown RBP17.83■□□□□ 0.44
ZEB1-218ENST00000560196 G3BP1Q13283 466 aaKnown RBP eCLIP17.83■□□□□ 0.44
ZEB1-218ENST00000560196 FAM182BQ5T319 152 aa17.83■□□□□ 0.44
ZEB1-218ENST00000560196 TBC1D2BQ9UPU7 963 aa17.83■□□□□ 0.44
ZEB1-218ENST00000560196 NUP98P52948 1817 aa17.82■□□□□ 0.44
ZEB1-218ENST00000560196 USP42Q9H9J4 1324 aaKnown RBP17.82■□□□□ 0.44
ZEB1-218ENST00000560196 EIF5BO60841 1220 aaKnown RBP17.82■□□□□ 0.44
ZEB1-218ENST00000560196 MX1P20591 662 aa17.82■□□□□ 0.44
ZEB1-218ENST00000560196 OS9Q13438 667 aaPredicted RBP17.82■□□□□ 0.44
ZEB1-218ENST00000560196 LMBR1LQ6UX01 489 aa17.82■□□□□ 0.44
ZEB1-218ENST00000560196 JARID2Q92833 1246 aaPredicted RBP17.82■□□□□ 0.44
ZEB1-218ENST00000560196 ARXQ96QS3 562 aa17.82■□□□□ 0.44
ZEB1-218ENST00000560196 PA2G4Q9UQ80 394 aaKnown RBP17.82■□□□□ 0.44
ZEB1-218ENST00000560196 RPS6KA4O75676 772 aa17.81■□□□□ 0.44
ZEB1-218ENST00000560196 ANP32AP39687 249 aaKnown RBP17.81■□□□□ 0.44
ZEB1-218ENST00000560196 PTPN12Q05209 780 aaKnown RBP17.81■□□□□ 0.44
ZEB1-218ENST00000560196 PARP10Q53GL7 1025 aa17.81■□□□□ 0.44
ZEB1-218ENST00000560196 CLEC4GQ6UXB4 293 aa17.81■□□□□ 0.44
ZEB1-218ENST00000560196 CCNL1Q9UK58 526 aaPredicted RBP17.81■□□□□ 0.44
ZEB1-218ENST00000560196 BRWD3Q6RI45 1802 aa17.8■□□□□ 0.44
ZEB1-218ENST00000560196 HMGB2P26583 209 aaKnown RBP17.8■□□□□ 0.44
ZEB1-218ENST00000560196 CLASRPQ8N2M8 674 aaKnown RBP17.8■□□□□ 0.44
ZEB1-218ENST00000560196 AK7Q96M32 723 aa17.8■□□□□ 0.44
ZEB1-218ENST00000560196 IL1RAPL2Q9NP60 686 aa17.8■□□□□ 0.44
ZEB1-218ENST00000560196 ZNF652Q9Y2D9 606 aa17.8■□□□□ 0.44
ZEB1-218ENST00000560196 BCORQ6W2J9 1755 aa17.8■□□□□ 0.44
ZEB1-218ENST00000560196 CDC45O75419 566 aa17.79■□□□□ 0.44
ZEB1-218ENST00000560196 SASH1O94885 1247 aa17.79■□□□□ 0.44
ZEB1-218ENST00000560196 CSF1RP07333 972 aa17.79■□□□□ 0.44
ZEB1-218ENST00000560196 FBXO3Q9UK99 471 aa17.79■□□□□ 0.44
ZEB1-218ENST00000560196 TTC41PQ6P2S7 1318 aa17.78■□□□□ 0.44
ZEB1-218ENST00000560196 UBN2Q6ZU65 1347 aa17.78■□□□□ 0.44
ZEB1-218ENST00000560196 SEC24BO95487 1268 aa17.78■□□□□ 0.44
ZEB1-218ENST00000560196 GPTP24298 496 aa17.78■□□□□ 0.44
ZEB1-218ENST00000560196 FBXO41Q8TF61 875 aa17.78■□□□□ 0.44
ZEB1-218ENST00000560196 UPF2Q9HAU5 1272 aaKnown RBP17.78■□□□□ 0.44
ZEB1-218ENST00000560196 SDSP20132 328 aa17.77■□□□□ 0.44
ZEB1-218ENST00000560196 FAM89AQ96GI7 184 aa17.77■□□□□ 0.44
ZEB1-218ENST00000560196 TRMT112Q9UI30 125 aaKnown RBP17.77■□□□□ 0.44
ZEB1-218ENST00000560196 TAF1LQ8IZX4 1826 aa17.77■□□□□ 0.43
ZEB1-218ENST00000560196 CIAO1O76071 339 aa17.76■□□□□ 0.43
ZEB1-218ENST00000560196 HSP90B1P14625 803 aaKnown RBP17.76■□□□□ 0.43
ZEB1-218ENST00000560196 SLC27A3Q5K4L6 730 aa17.76■□□□□ 0.43
ZEB1-218ENST00000560196 TBC1D9Q6ZT07 1266 aa17.76■□□□□ 0.43
ZEB1-218ENST00000560196 SCN7AQ01118 1682 aa17.75■□□□□ 0.43
ZEB1-218ENST00000560196 PDE8AO60658 829 aa17.75■□□□□ 0.43
ZEB1-218ENST00000560196 RTL5Q5HYW3 569 aaPredicted RBP17.75■□□□□ 0.43
ZEB1-218ENST00000560196 NUTM1Q86Y26 1132 aa17.75■□□□□ 0.43
ZEB1-218ENST00000560196 PI4K2BQ8TCG2 481 aa17.75■□□□□ 0.43
ZEB1-218ENST00000560196 GPATCH3Q96I76 525 aa17.75■□□□□ 0.43
ZEB1-218ENST00000560196 UTP14AQ9BVJ6 771 aaKnown RBP17.75■□□□□ 0.43
ZEB1-218ENST00000560196 NARFQ9UHQ1 456 aa17.75■□□□□ 0.43
ZEB1-218ENST00000560196 TUBGCP6Q96RT7 1819 aa17.75■□□□□ 0.43
ZEB1-218ENST00000560196 IRS4O14654 1257 aaPredicted RBP17.74■□□□□ 0.43
ZEB1-218ENST00000560196 IFIT2P09913 472 aaKnown RBP17.74■□□□□ 0.43
ZEB1-218ENST00000560196 RXRBP28702 533 aa17.74■□□□□ 0.43
ZEB1-218ENST00000560196 IL15P40933 162 aaPredicted RBP17.74■□□□□ 0.43
ZEB1-218ENST00000560196 KCNQ4P56696 695 aa17.74■□□□□ 0.43
ZEB1-218ENST00000560196 KLHDC4Q8TBB5 520 aa17.74■□□□□ 0.43
ZEB1-218ENST00000560196 TBC1D32Q96NH3 1257 aa17.74■□□□□ 0.43
ZEB1-218ENST00000560196 SIL1Q9H173 461 aa17.74■□□□□ 0.43
ZEB1-218ENST00000560196 GPR108Q9NPR9 543 aa17.74■□□□□ 0.43
ZEB1-218ENST00000560196 CHMP3Q9Y3E7 222 aa17.74■□□□□ 0.43
ZEB1-218ENST00000560196 RTCBQ9Y3I0 505 aaKnown RBP17.74■□□□□ 0.43
ZEB1-218ENST00000560196 C4BP0C0L5 1744 aa17.74■□□□□ 0.43
ZEB1-218ENST00000560196 SH3TC1Q8TE82 1336 aa17.73■□□□□ 0.43
ZEB1-218ENST00000560196 EYA2O00167 538 aa17.73■□□□□ 0.43
ZEB1-218ENST00000560196 ERC2O15083 957 aa17.73■□□□□ 0.43
ZEB1-218ENST00000560196 GLRX3O76003 335 aaKnown RBP17.73■□□□□ 0.43
ZEB1-218ENST00000560196 CTSWP56202 376 aa17.73■□□□□ 0.43
ZEB1-218ENST00000560196 CCDC57Q2TAC2 916 aa17.73■□□□□ 0.43
ZEB1-218ENST00000560196 SUSD4Q5VX71 490 aa17.73■□□□□ 0.43
ZEB1-218ENST00000560196 TTLL11Q8NHH1 800 aa17.73■□□□□ 0.43
ZEB1-218ENST00000560196 NIP7Q9Y221 180 aaKnown RBP eCLIP17.73■□□□□ 0.43
ZEB1-218ENST00000560196 GNPATO15228 680 aa17.72■□□□□ 0.43
ZEB1-218ENST00000560196 NTSR2O95665 410 aa17.72■□□□□ 0.43
ZEB1-218ENST00000560196 CASC1Q6TDU7 716 aa17.72■□□□□ 0.43
ZEB1-218ENST00000560196 ATG9AQ7Z3C6 839 aa17.72■□□□□ 0.43
ZEB1-218ENST00000560196 AACSQ86V21 672 aa17.72■□□□□ 0.43
ZEB1-218ENST00000560196 EAF2Q96CJ1 260 aaPredicted RBP17.72■□□□□ 0.43
ZEB1-218ENST00000560196 BCL11AQ9H165 835 aa17.72■□□□□ 0.43
ZEB1-218ENST00000560196 ECHDC1Q9NTX5 307 aa17.72■□□□□ 0.43
ZEB1-218ENST00000560196 IFIT5Q13325 482 aaKnown RBP17.71■□□□□ 0.43
ZEB1-218ENST00000560196 DDRGK1Q96HY6 314 aa17.71■□□□□ 0.43
ZEB1-218ENST00000560196 IPO9Q96P70 1041 aaKnown RBP17.71■□□□□ 0.43
ZEB1-218ENST00000560196 RTL9Q8NET4 1388 aa17.7■□□□□ 0.42
ZEB1-218ENST00000560196 TRIM37O94972 964 aa17.7■□□□□ 0.42
ZEB1-218ENST00000560196 TFCP2Q12800 502 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms