RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, human

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM2D3-209	ENST00000560013	MX1	P20591	662 aa		28.97	■■■□□ 2.23
TM2D3-209	ENST00000560013	FOXO4	P98177	505 aa		28.97	■■■□□ 2.23
TM2D3-209	ENST00000560013	RTL5	Q5HYW3	569 aa	Predicted RBP	28.97	■■■□□ 2.23
TM2D3-209	ENST00000560013	G3BP1	Q13283	466 aa	Known RBP eCLIP	28.96	■■■□□ 2.23
TM2D3-209	ENST00000560013	UPF2	Q9HAU5	1272 aa	Known RBP	28.96	■■■□□ 2.23
TM2D3-209	ENST00000560013	STAP2	Q9UGK3	403 aa		28.96	■■■□□ 2.23
TM2D3-209	ENST00000560013	MSH5	O43196	834 aa		28.95	■■■□□ 2.23
TM2D3-209	ENST00000560013	LMBR1L	Q6UX01	489 aa		28.95	■■■□□ 2.22
TM2D3-209	ENST00000560013	PCCA	P05165	728 aa	Predicted RBP	28.94	■■■□□ 2.22
TM2D3-209	ENST00000560013	COPRS	Q9NQ92	184 aa		28.94	■■■□□ 2.22
TM2D3-209	ENST00000560013	RFX5	P48382	616 aa	Predicted RBP	28.93	■■■□□ 2.22
TM2D3-209	ENST00000560013	NLRP10	Q86W26	655 aa		28.93	■■■□□ 2.22
TM2D3-209	ENST00000560013	CLASRP	Q8N2M8	674 aa	Known RBP	28.93	■■■□□ 2.22
TM2D3-209	ENST00000560013	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	28.93	■■■□□ 2.22
TM2D3-209	ENST00000560013	LINC00116	Q8NCU8	138 aa		28.93	■■■□□ 2.22
TM2D3-209	ENST00000560013	AOX1	Q06278	1338 aa		28.92	■■■□□ 2.22
TM2D3-209	ENST00000560013	CDC45	O75419	566 aa		28.92	■■■□□ 2.22
TM2D3-209	ENST00000560013	NUTM1	Q86Y26	1132 aa		28.92	■■■□□ 2.22
TM2D3-209	ENST00000560013	KLHDC4	Q8TBB5	520 aa		28.92	■■■□□ 2.22
TM2D3-209	ENST00000560013	SDS	P20132	328 aa		28.91	■■■□□ 2.22
TM2D3-209	ENST00000560013	GPT	P24298	496 aa		28.91	■■■□□ 2.22
TM2D3-209	ENST00000560013	PTPN12	Q05209	780 aa	Known RBP	28.91	■■■□□ 2.22
TM2D3-209	ENST00000560013	IPO9	Q96P70	1041 aa	Known RBP	28.91	■■■□□ 2.22
TM2D3-209	ENST00000560013	TUBGCP6	Q96RT7	1819 aa		28.91	■■■□□ 2.22
TM2D3-209	ENST00000560013	SASH1	O94885	1247 aa		28.91	■■■□□ 2.22
TM2D3-209	ENST00000560013	TBC1D9	Q6ZT07	1266 aa		28.91	■■■□□ 2.22
TM2D3-209	ENST00000560013	SIL1	Q9H173	461 aa		28.91	■■■□□ 2.22
TM2D3-209	ENST00000560013	BRWD3	Q6RI45	1802 aa		28.9	■■■□□ 2.22
TM2D3-209	ENST00000560013	LY75	O60449	1722 aa		28.9	■■■□□ 2.22
TM2D3-209	ENST00000560013	TSHZ3	Q63HK5	1081 aa		28.89	■■■□□ 2.22
TM2D3-209	ENST00000560013	ZNF34	Q8IZ26	560 aa		28.89	■■■□□ 2.22
TM2D3-209	ENST00000560013	FAM89A	Q96GI7	184 aa		28.89	■■■□□ 2.22
TM2D3-209	ENST00000560013	CNTNAP4	Q9C0A0	1308 aa		28.89	■■■□□ 2.22
TM2D3-209	ENST00000560013	KCNQ4	P56696	695 aa		28.89	■■■□□ 2.21
TM2D3-209	ENST00000560013	CHMP3	Q9Y3E7	222 aa		28.89	■■■□□ 2.21
TM2D3-209	ENST00000560013	MFAP1	P55081	439 aa	Known RBP	28.88	■■■□□ 2.21
TM2D3-209	ENST00000560013	ZNF772	Q68DY9	489 aa	Predicted RBP	28.88	■■■□□ 2.21
TM2D3-209	ENST00000560013	PLA2G12B	Q9BX93	195 aa		28.88	■■■□□ 2.21
TM2D3-209	ENST00000560013	CDHR2	Q9BYE9	1310 aa		28.88	■■■□□ 2.21
TM2D3-209	ENST00000560013	CAMTA2	O94983	1202 aa		28.87	■■■□□ 2.21
TM2D3-209	ENST00000560013	BCL11B	Q9C0K0	894 aa	Predicted RBP	28.87	■■■□□ 2.21
TM2D3-209	ENST00000560013	RC3H1	Q5TC82	1133 aa	Known RBP	28.86	■■■□□ 2.21
TM2D3-209	ENST00000560013	KRT27	Q7Z3Y8	459 aa		28.86	■■■□□ 2.21
TM2D3-209	ENST00000560013	TBC1D32	Q96NH3	1257 aa		28.86	■■■□□ 2.21
TM2D3-209	ENST00000560013	CCNL1	Q9UK58	526 aa	Predicted RBP	28.86	■■■□□ 2.21
TM2D3-209	ENST00000560013	FAM196A	Q6ZSG2	479 aa		28.85	■■■□□ 2.21
TM2D3-209	ENST00000560013	TRMT112	Q9UI30	125 aa	Known RBP	28.85	■■■□□ 2.21
TM2D3-209	ENST00000560013	UBN2	Q6ZU65	1347 aa		28.84	■■■□□ 2.21
TM2D3-209	ENST00000560013	USP42	Q9H9J4	1324 aa	Known RBP	28.84	■■■□□ 2.21
TM2D3-209	ENST00000560013	TAF1L	Q8IZX4	1826 aa		28.84	■■■□□ 2.21
TM2D3-209	ENST00000560013	IFIT2	P09913	472 aa	Known RBP	28.84	■■■□□ 2.21
TM2D3-209	ENST00000560013	TTC41P	Q6P2S7	1318 aa		28.84	■■■□□ 2.21
TM2D3-209	ENST00000560013	BCOR	Q6W2J9	1755 aa		28.83	■■■□□ 2.21
TM2D3-209	ENST00000560013	DDRGK1	Q96HY6	314 aa		28.83	■■■□□ 2.21
TM2D3-209	ENST00000560013	EIF5B	O60841	1220 aa	Known RBP	28.83	■■■□□ 2.2
TM2D3-209	ENST00000560013	RBM6	P78332	1123 aa	Known RBP	28.83	■■■□□ 2.2
TM2D3-209	ENST00000560013	AACS	Q86V21	672 aa		28.83	■■■□□ 2.2
TM2D3-209	ENST00000560013	PI4K2B	Q8TCG2	481 aa		28.83	■■■□□ 2.2
TM2D3-209	ENST00000560013	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	28.83	■■■□□ 2.2
TM2D3-209	ENST00000560013	MYH3	P11055	1940 aa		28.82	■■■□□ 2.2
TM2D3-209	ENST00000560013	CASC1	Q6TDU7	716 aa		28.82	■■■□□ 2.2
TM2D3-209	ENST00000560013	CSF1R	P07333	972 aa		28.81	■■■□□ 2.2
TM2D3-209	ENST00000560013	SYNE4	Q8N205	404 aa		28.81	■■■□□ 2.2
TM2D3-209	ENST00000560013	EAF2	Q96CJ1	260 aa	Predicted RBP	28.81	■■■□□ 2.2
TM2D3-209	ENST00000560013	C22orf23	Q9BZE7	217 aa		28.81	■■■□□ 2.2
TM2D3-209	ENST00000560013	ZNF652	Q9Y2D9	606 aa		28.8	■■■□□ 2.2
TM2D3-209	ENST00000560013	RPS6KA4	O75676	772 aa		28.8	■■■□□ 2.2
TM2D3-209	ENST00000560013	GPATCH3	Q96I76	525 aa		28.8	■■■□□ 2.2
TM2D3-209	ENST00000560013	TRIM6-TRIM34	B2RNG4	842 aa		28.79	■■■□□ 2.2
TM2D3-209	ENST00000560013	IRS4	O14654	1257 aa	Predicted RBP	28.79	■■■□□ 2.2
TM2D3-209	ENST00000560013	CCDC57	Q2TAC2	916 aa		28.79	■■■□□ 2.2
TM2D3-209	ENST00000560013	PARP10	Q53GL7	1025 aa		28.79	■■■□□ 2.2
TM2D3-209	ENST00000560013	CLEC4G	Q6UXB4	293 aa		28.79	■■■□□ 2.2
TM2D3-209	ENST00000560013	AK9	Q5TCS8	1911 aa		28.79	■■■□□ 2.2
TM2D3-209	ENST00000560013	ERC2	O15083	957 aa		28.78	■■■□□ 2.2
TM2D3-209	ENST00000560013	ECHDC1	Q9NTX5	307 aa		28.78	■■■□□ 2.2
TM2D3-209	ENST00000560013	GLRX3	O76003	335 aa	Known RBP	28.78	■■■□□ 2.2
TM2D3-209	ENST00000560013	SUSD4	Q5VX71	490 aa		28.78	■■■□□ 2.2
TM2D3-209	ENST00000560013	RILPL2	Q969X0	211 aa		28.78	■■■□□ 2.2
TM2D3-209	ENST00000560013	TFCP2	Q12800	502 aa		28.77	■■■□□ 2.2
TM2D3-209	ENST00000560013	RGL2	O15211	777 aa		28.76	■■■□□ 2.2
TM2D3-209	ENST00000560013	PDE8A	O60658	829 aa		28.76	■■■□□ 2.2
TM2D3-209	ENST00000560013	CCDC8	Q9H0W5	538 aa	Predicted RBP	28.76	■■■□□ 2.2
TM2D3-209	ENST00000560013	NIP7	Q9Y221	180 aa	Known RBP eCLIP	28.76	■■■□□ 2.2
TM2D3-209	ENST00000560013	ATG9A	Q7Z3C6	839 aa		28.76	■■■□□ 2.19
TM2D3-209	ENST00000560013	TTLL11	Q8NHH1	800 aa		28.76	■■■□□ 2.19
TM2D3-209	ENST00000560013	UTP14A	Q9BVJ6	771 aa	Known RBP	28.76	■■■□□ 2.19
TM2D3-209	ENST00000560013	EYA2	O00167	538 aa		28.75	■■■□□ 2.19
TM2D3-209	ENST00000560013	CIAO1	O76071	339 aa		28.75	■■■□□ 2.19
TM2D3-209	ENST00000560013	IL15	P40933	162 aa	Predicted RBP	28.75	■■■□□ 2.19
TM2D3-209	ENST00000560013	CTSW	P56202	376 aa		28.75	■■■□□ 2.19
TM2D3-209	ENST00000560013	ZNF594	Q96JF6	807 aa	Predicted RBP	28.75	■■■□□ 2.19
TM2D3-209	ENST00000560013	AK7	Q96M32	723 aa		28.75	■■■□□ 2.19
TM2D3-209	ENST00000560013	SH3TC1	Q8TE82	1336 aa		28.75	■■■□□ 2.19
TM2D3-209	ENST00000560013	GNPAT	O15228	680 aa		28.74	■■■□□ 2.19
TM2D3-209	ENST00000560013	IFIT5	Q13325	482 aa	Known RBP	28.74	■■■□□ 2.19
TM2D3-209	ENST00000560013	TNNI3K	Q59H18	835 aa		28.74	■■■□□ 2.19
TM2D3-209	ENST00000560013	ANP32E	Q9BTT0	268 aa		28.74	■■■□□ 2.19
TM2D3-209	ENST00000560013	FBXO3	Q9UK99	471 aa		28.74	■■■□□ 2.19
TM2D3-209	ENST00000560013	FPGT-TNNI3K	V9GXZ4	949 aa		28.74	■■■□□ 2.19

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms