RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 TRIM28Q13263 835 aaKnown RBP8.32□□□□□ -1.08
CHRNA3-204ENST00000559002 C20orf194Q5TEA3 1177 aa8.32□□□□□ -1.08
CHRNA3-204ENST00000559002 INTS3Q68E01 1043 aaKnown RBP8.32□□□□□ -1.08
CHRNA3-204ENST00000559002 NLRP10Q86W26 655 aa8.32□□□□□ -1.08
CHRNA3-204ENST00000559002 NBPF5PQ86XG9 351 aaPredicted RBP8.32□□□□□ -1.08
CHRNA3-204ENST00000559002 UTP14AQ9BVJ6 771 aaKnown RBP8.32□□□□□ -1.08
CHRNA3-204ENST00000559002 NYXQ9GZU5 481 aa8.32□□□□□ -1.08
CHRNA3-204ENST00000559002 C9orf78Q9NZ63 289 aaPredicted RBP8.32□□□□□ -1.08
CHRNA3-204ENST00000559002 TRMT112Q9UI30 125 aaKnown RBP8.32□□□□□ -1.08
CHRNA3-204ENST00000559002 SERPINB2P05120 415 aa8.31□□□□□ -1.08
CHRNA3-204ENST00000559002 IRX6P78412 446 aaPredicted RBP8.31□□□□□ -1.08
CHRNA3-204ENST00000559002 GCKRQ14397 625 aa8.31□□□□□ -1.08
CHRNA3-204ENST00000559002 MVPQ14764 893 aaKnown RBP8.31□□□□□ -1.08
CHRNA3-204ENST00000559002 TPTE2Q6XPS3 522 aa8.31□□□□□ -1.08
CHRNA3-204ENST00000559002 CNBD1Q8NA66 436 aa8.31□□□□□ -1.08
CHRNA3-204ENST00000559002 CHMP4BQ9H444 224 aaKnown RBP8.31□□□□□ -1.08
CHRNA3-204ENST00000559002 DDX19BQ9UMR2 479 aa8.31□□□□□ -1.08
CHRNA3-204ENST00000559002 ATF5Q9Y2D1 282 aaPredicted RBP8.31□□□□□ -1.08
CHRNA3-204ENST00000559002 COG6Q9Y2V7 657 aa8.31□□□□□ -1.08
CHRNA3-204ENST00000559002 IBTKQ9P2D0 1353 aaPredicted RBP8.31□□□□□ -1.08
CHRNA3-204ENST00000559002 CASZ1Q86V15 1759 aa8.3□□□□□ -1.08
CHRNA3-204ENST00000559002 GRM8O00222 908 aa8.3□□□□□ -1.08
CHRNA3-204ENST00000559002 POLRMTO00411 1230 aaKnown RBP8.3□□□□□ -1.08
CHRNA3-204ENST00000559002 NTSR2O95665 410 aa8.3□□□□□ -1.08
CHRNA3-204ENST00000559002 PCCAP05165 728 aaPredicted RBP8.3□□□□□ -1.08
CHRNA3-204ENST00000559002 UBTFL1P0CB47 393 aaPredicted RBP8.3□□□□□ -1.08
CHRNA3-204ENST00000559002 HSP90B1P14625 803 aaKnown RBP8.3□□□□□ -1.08
CHRNA3-204ENST00000559002 TM4SF1P30408 202 aa8.3□□□□□ -1.08
CHRNA3-204ENST00000559002 ST5P78524 1137 aa8.3□□□□□ -1.08
CHRNA3-204ENST00000559002 DDR1Q08345 913 aa8.3□□□□□ -1.08
CHRNA3-204ENST00000559002 RTL5Q5HYW3 569 aaPredicted RBP8.3□□□□□ -1.08
CHRNA3-204ENST00000559002 SUSD4Q5VX71 490 aa8.3□□□□□ -1.08
CHRNA3-204ENST00000559002 UBE3BQ7Z3V4 1068 aa8.3□□□□□ -1.08
CHRNA3-204ENST00000559002 ANKRD36CQ5JPF3 1778 aa8.3□□□□□ -1.08
CHRNA3-204ENST00000559002 SH3TC1Q8TE82 1336 aa8.29□□□□□ -1.08
CHRNA3-204ENST00000559002 NUP98P52948 1817 aa8.29□□□□□ -1.08
CHRNA3-204ENST00000559002 GNAI3P08754 354 aa8.29□□□□□ -1.08
CHRNA3-204ENST00000559002 PRR5LQ6MZQ0 368 aa8.29□□□□□ -1.08
CHRNA3-204ENST00000559002 NUTM1Q86Y26 1132 aa8.29□□□□□ -1.08
CHRNA3-204ENST00000559002 ZBTB38Q8NAP3 1195 aaPredicted RBP8.29□□□□□ -1.08
CHRNA3-204ENST00000559002 FAM89AQ96GI7 184 aa8.29□□□□□ -1.08
CHRNA3-204ENST00000559002 CRBNQ96SW2 442 aa8.29□□□□□ -1.08
CHRNA3-204ENST00000559002 SPON1Q9HCB6 807 aa8.29□□□□□ -1.08
CHRNA3-204ENST00000559002 HDAC5Q9UQL6 1122 aa8.29□□□□□ -1.08
CHRNA3-204ENST00000559002 CDHR2Q9BYE9 1310 aa8.29□□□□□ -1.08
CHRNA3-204ENST00000559002 H7C1W4 665 aa8.28□□□□□ -1.08
CHRNA3-204ENST00000559002 IRS4O14654 1257 aaPredicted RBP8.28□□□□□ -1.08
CHRNA3-204ENST00000559002 ERFEQ4G0M1 354 aa8.28□□□□□ -1.08
CHRNA3-204ENST00000559002 CCDC24Q8N4L8 307 aa8.28□□□□□ -1.08
CHRNA3-204ENST00000559002 JARID2Q92833 1246 aaPredicted RBP8.28□□□□□ -1.08
CHRNA3-204ENST00000559002 MEIS3Q99687 375 aa8.28□□□□□ -1.08
CHRNA3-204ENST00000559002 USP44Q9H0E7 712 aa8.28□□□□□ -1.08
CHRNA3-204ENST00000559002 COL24A1Q17RW2 1714 aa8.28□□□□□ -1.08
CHRNA3-204ENST00000559002 UTYO14607 1347 aa8.28□□□□□ -1.08
CHRNA3-204ENST00000559002 N4BP2Q86UW6 1770 aaPredicted RBP8.27□□□□□ -1.08
CHRNA3-204ENST00000559002 AFDNP55196 1824 aaKnown RBP8.27□□□□□ -1.09
CHRNA3-204ENST00000559002 ABCC12Q96J65 1359 aa8.27□□□□□ -1.09
CHRNA3-204ENST00000559002 GNAI2P04899 355 aa8.27□□□□□ -1.09
CHRNA3-204ENST00000559002 NBPF7P0C2Y1 421 aaPredicted RBP8.27□□□□□ -1.09
CHRNA3-204ENST00000559002 HCLS1P14317 486 aaPredicted RBP8.27□□□□□ -1.09
CHRNA3-204ENST00000559002 KLHL34Q8N239 644 aa8.27□□□□□ -1.09
CHRNA3-204ENST00000559002 SUCLG2Q96I99 432 aa8.27□□□□□ -1.09
CHRNA3-204ENST00000559002 ZBTB7BO15156 539 aaPredicted RBP8.26□□□□□ -1.09
CHRNA3-204ENST00000559002 PDE8AO60658 829 aa8.26□□□□□ -1.09
CHRNA3-204ENST00000559002 PDE6BP35913 854 aa8.26□□□□□ -1.09
CHRNA3-204ENST00000559002 PTGER2P43116 358 aa8.26□□□□□ -1.09
CHRNA3-204ENST00000559002 CASP7P55210 303 aa8.26□□□□□ -1.09
CHRNA3-204ENST00000559002 AAMPQ13685 434 aa8.26□□□□□ -1.09
CHRNA3-204ENST00000559002 SYNE4Q8N205 404 aa8.26□□□□□ -1.09
CHRNA3-204ENST00000559002 EXOC6Q8TAG9 804 aa8.26□□□□□ -1.09
CHRNA3-204ENST00000559002 NLRP3Q96P20 1036 aa8.26□□□□□ -1.09
CHRNA3-204ENST00000559002 C1orf115Q9H7X2 142 aa8.26□□□□□ -1.09
CHRNA3-204ENST00000559002 PPP1R1BQ9UD71 204 aaPredicted RBP8.26□□□□□ -1.09
CHRNA3-204ENST00000559002 CHMP3Q9Y3E7 222 aa8.26□□□□□ -1.09
CHRNA3-204ENST00000559002 LRRFIP2Q9Y608 721 aaKnown RBP8.26□□□□□ -1.09
CHRNA3-204ENST00000559002 RIC1Q4ADV7 1423 aa8.26□□□□□ -1.09
CHRNA3-204ENST00000559002 C10orf71Q711Q0 1435 aa8.26□□□□□ -1.09
CHRNA3-204ENST00000559002 CTSWP56202 376 aa8.25□□□□□ -1.09
CHRNA3-204ENST00000559002 CCDC152Q4G0S7 254 aa8.25□□□□□ -1.09
CHRNA3-204ENST00000559002 SLC10A5Q5PT55 438 aa8.25□□□□□ -1.09
CHRNA3-204ENST00000559002 SGIP1Q9BQI5 828 aa8.25□□□□□ -1.09
CHRNA3-204ENST00000559002 BRIP1Q9BX63 1249 aa8.25□□□□□ -1.09
CHRNA3-204ENST00000559002 PLA2G12BQ9BX93 195 aa8.25□□□□□ -1.09
CHRNA3-204ENST00000559002 BICC1Q9H694 974 aaKnown RBP8.25□□□□□ -1.09
CHRNA3-204ENST00000559002 ZBTB40Q9NUA8 1239 aa8.25□□□□□ -1.09
CHRNA3-204ENST00000559002 NRXN2Q9P2S2 1712 aa8.24□□□□□ -1.09
CHRNA3-204ENST00000559002 H0YIN7 160 aa8.24□□□□□ -1.09
CHRNA3-204ENST00000559002 EPHA10Q5JZY3 1008 aa8.24□□□□□ -1.09
CHRNA3-204ENST00000559002 LMBR1LQ6UX01 489 aa8.24□□□□□ -1.09
CHRNA3-204ENST00000559002 RPGRQ92834 1020 aaKnown RBP8.24□□□□□ -1.09
CHRNA3-204ENST00000559002 CCDC85AQ96PX6 553 aaPredicted RBP8.24□□□□□ -1.09
CHRNA3-204ENST00000559002 PDZRN3Q9UPQ7 1066 aa8.24□□□□□ -1.09
CHRNA3-204ENST00000559002 FOXO4P98177 505 aa8.23□□□□□ -1.09
CHRNA3-204ENST00000559002 SF3B3Q15393 1217 aaKnown RBP8.23□□□□□ -1.09
CHRNA3-204ENST00000559002 CCDC57Q2TAC2 916 aa8.23□□□□□ -1.09
CHRNA3-204ENST00000559002 FAM161AQ3B820 660 aa8.23□□□□□ -1.09
CHRNA3-204ENST00000559002 RABL6Q3YEC7 729 aaPredicted RBP8.23□□□□□ -1.09
CHRNA3-204ENST00000559002 TAF7LQ5H9L4 462 aa8.23□□□□□ -1.09
CHRNA3-204ENST00000559002 C3orf67Q6ZVT6 689 aa8.23□□□□□ -1.09
CHRNA3-204ENST00000559002 DDX46Q7L014 1031 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms