RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 API5Q9BZZ5 524 aaKnown RBP15.77■□□□□ 0.12
GABPB1-208ENST00000558970 MYH3P11055 1940 aa15.76■□□□□ 0.11
GABPB1-208ENST00000558970 IPO8O15397 1037 aaKnown RBP15.76■□□□□ 0.11
GABPB1-208ENST00000558970 BRPF1P55201 1214 aaPredicted RBP15.76■□□□□ 0.11
GABPB1-208ENST00000558970 NLRP10Q86W26 655 aa15.76■□□□□ 0.11
GABPB1-208ENST00000558970 FTSJ3Q8IY81 847 aaKnown RBP15.76■□□□□ 0.11
GABPB1-208ENST00000558970 CNBD1Q8NA66 436 aa15.76■□□□□ 0.11
GABPB1-208ENST00000558970 ZNF784Q8NCA9 323 aaPredicted RBP15.76■□□□□ 0.11
GABPB1-208ENST00000558970 ISCA1Q9BUE6 129 aa15.76■□□□□ 0.11
GABPB1-208ENST00000558970 TRMT112Q9UI30 125 aaKnown RBP15.76■□□□□ 0.11
GABPB1-208ENST00000558970 PXDNLA1KZ92 1463 aa15.76■□□□□ 0.11
GABPB1-208ENST00000558970 COL11A2P13942 1736 aaPredicted RBP15.75■□□□□ 0.11
GABPB1-208ENST00000558970 NEURL1BA8MQ27 555 aa15.75■□□□□ 0.11
GABPB1-208ENST00000558970 BEND3Q5T5X7 828 aa15.75■□□□□ 0.11
GABPB1-208ENST00000558970 SYNE4Q8N205 404 aa15.75■□□□□ 0.11
GABPB1-208ENST00000558970 SRCIN1Q9C0H9 1055 aa15.75■□□□□ 0.11
GABPB1-208ENST00000558970 CWC25Q9NXE8 425 aaPredicted RBP15.75■□□□□ 0.11
GABPB1-208ENST00000558970 KIF13BQ9NQT8 1826 aa15.75■□□□□ 0.11
GABPB1-208ENST00000558970 UTRNP46939 3433 aa15.74■□□□□ 0.11
GABPB1-208ENST00000558970 NTSR2O95665 410 aa15.74■□□□□ 0.11
GABPB1-208ENST00000558970 ERFEQ4G0M1 354 aa15.74■□□□□ 0.11
GABPB1-208ENST00000558970 PPP1R42Q7Z4L9 355 aa15.74■□□□□ 0.11
GABPB1-208ENST00000558970 LINS1Q8NG48 757 aa15.74■□□□□ 0.11
GABPB1-208ENST00000558970 PANK1Q8TE04 598 aa15.74■□□□□ 0.11
GABPB1-208ENST00000558970 FAM89AQ96GI7 184 aa15.74■□□□□ 0.11
GABPB1-208ENST00000558970 UTP14AQ9BVJ6 771 aaKnown RBP15.74■□□□□ 0.11
GABPB1-208ENST00000558970 FHDC1Q9C0D6 1143 aaPredicted RBP15.74■□□□□ 0.11
GABPB1-208ENST00000558970 ABCC12Q96J65 1359 aa15.74■□□□□ 0.11
GABPB1-208ENST00000558970 SPEF2Q9C093 1822 aa15.73■□□□□ 0.11
GABPB1-208ENST00000558970 ABCC4O15439 1325 aa15.73■□□□□ 0.11
GABPB1-208ENST00000558970 RLBP1P12271 317 aa15.73■□□□□ 0.11
GABPB1-208ENST00000558970 PARP10Q53GL7 1025 aa15.73■□□□□ 0.11
GABPB1-208ENST00000558970 C20orf194Q5TEA3 1177 aa15.73■□□□□ 0.11
GABPB1-208ENST00000558970 PRR5LQ6MZQ0 368 aa15.73■□□□□ 0.11
GABPB1-208ENST00000558970 TMEM57Q8N5G2 664 aa15.73■□□□□ 0.11
GABPB1-208ENST00000558970 ARHGAP45Q92619 1136 aa15.73■□□□□ 0.11
GABPB1-208ENST00000558970 SUPT16HQ9Y5B9 1047 aaKnown RBP15.73■□□□□ 0.11
GABPB1-208ENST00000558970 TAF1P21675 1872 aa15.73■□□□□ 0.11
GABPB1-208ENST00000558970 KIAA1551Q9HCM1 1747 aa15.72■□□□□ 0.11
GABPB1-208ENST00000558970 RGL2O15211 777 aa15.72■□□□□ 0.11
GABPB1-208ENST00000558970 RRP1P56182 461 aaKnown RBP15.72■□□□□ 0.11
GABPB1-208ENST00000558970 ST5P78524 1137 aa15.72■□□□□ 0.11
GABPB1-208ENST00000558970 TPTE2Q6XPS3 522 aa15.72■□□□□ 0.11
GABPB1-208ENST00000558970 UBE3BQ7Z3V4 1068 aa15.72■□□□□ 0.11
GABPB1-208ENST00000558970 ITPRIPQ8IWB1 547 aa15.72■□□□□ 0.11
GABPB1-208ENST00000558970 DZIP1LQ8IYY4 767 aaKnown RBP15.72■□□□□ 0.11
GABPB1-208ENST00000558970 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.72■□□□□ 0.11
GABPB1-208ENST00000558970 CCDC191Q8NCU4 936 aa15.72■□□□□ 0.11
GABPB1-208ENST00000558970 NYXQ9GZU5 481 aa15.72■□□□□ 0.11
GABPB1-208ENST00000558970 HCLS1P14317 486 aaPredicted RBP15.71■□□□□ 0.11
GABPB1-208ENST00000558970 GCKRQ14397 625 aa15.71■□□□□ 0.11
GABPB1-208ENST00000558970 C9orf78Q9NZ63 289 aaPredicted RBP15.71■□□□□ 0.11
GABPB1-208ENST00000558970 WWC3Q9ULE0 1092 aa15.71■□□□□ 0.11
GABPB1-208ENST00000558970 SH3TC1Q8TE82 1336 aa15.7■□□□□ 0.1
GABPB1-208ENST00000558970 C10orf71Q711Q0 1435 aa15.7■□□□□ 0.1
GABPB1-208ENST00000558970 DLEC1Q9Y238 1755 aa15.7■□□□□ 0.1
GABPB1-208ENST00000558970 CENPBP07199 599 aaPredicted RBP15.7■□□□□ 0.1
GABPB1-208ENST00000558970 CCT4P50991 539 aaKnown RBP15.7■□□□□ 0.1
GABPB1-208ENST00000558970 ALDH1L1O75891 902 aa15.69■□□□□ 0.1
GABPB1-208ENST00000558970 IRX6P78412 446 aaPredicted RBP15.69■□□□□ 0.1
GABPB1-208ENST00000558970 TRIM28Q13263 835 aaKnown RBP15.69■□□□□ 0.1
GABPB1-208ENST00000558970 COG6Q9Y2V7 657 aa15.69■□□□□ 0.1
GABPB1-208ENST00000558970 IBTKQ9P2D0 1353 aaPredicted RBP15.69■□□□□ 0.1
GABPB1-208ENST00000558970 IRS4O14654 1257 aaPredicted RBP15.68■□□□□ 0.1
GABPB1-208ENST00000558970 PCCAP05165 728 aaPredicted RBP15.68■□□□□ 0.1
GABPB1-208ENST00000558970 NBPF7P0C2Y1 421 aaPredicted RBP15.68■□□□□ 0.1
GABPB1-208ENST00000558970 C3orf67Q6ZVT6 689 aa15.68■□□□□ 0.1
GABPB1-208ENST00000558970 ZBTB38Q8NAP3 1195 aaPredicted RBP15.68■□□□□ 0.1
GABPB1-208ENST00000558970 CCDC85AQ96PX6 553 aaPredicted RBP15.68■□□□□ 0.1
GABPB1-208ENST00000558970 GRM8O00222 908 aa15.67■□□□□ 0.1
GABPB1-208ENST00000558970 CHRNA5P30532 468 aa15.67■□□□□ 0.1
GABPB1-208ENST00000558970 INTS3Q68E01 1043 aaKnown RBP15.67■□□□□ 0.1
GABPB1-208ENST00000558970 NLGN2Q8NFZ4 835 aa15.67■□□□□ 0.1
GABPB1-208ENST00000558970 MEIS3Q99687 375 aa15.67■□□□□ 0.1
GABPB1-208ENST00000558970 BRCA1P38398 1863 aaKnown RBP15.67■□□□□ 0.1
GABPB1-208ENST00000558970 MS4A1P11836 297 aa15.66■□□□□ 0.1
GABPB1-208ENST00000558970 A0A0G2JLW4 131 aa15.65■□□□□ 0.1
GABPB1-208ENST00000558970 H7C1W4 665 aa15.65■□□□□ 0.1
GABPB1-208ENST00000558970 C2CD5Q86YS7 1000 aa15.65■□□□□ 0.1
GABPB1-208ENST00000558970 SUCLG2Q96I99 432 aa15.65■□□□□ 0.1
GABPB1-208ENST00000558970 USP44Q9H0E7 712 aa15.65■□□□□ 0.1
GABPB1-208ENST00000558970 COL4A1P02462 1669 aa15.64■□□□□ 0.09
GABPB1-208ENST00000558970 UBTFL1P0CB47 393 aaPredicted RBP15.64■□□□□ 0.09
GABPB1-208ENST00000558970 CASP7P55210 303 aa15.64■□□□□ 0.09
GABPB1-208ENST00000558970 C1QTNF8P60827 252 aa15.64■□□□□ 0.09
GABPB1-208ENST00000558970 MVPQ14764 893 aaKnown RBP15.64■□□□□ 0.09
GABPB1-208ENST00000558970 NLRP3Q96P20 1036 aa15.64■□□□□ 0.09
GABPB1-208ENST00000558970 BRIP1Q9BX63 1249 aa15.64■□□□□ 0.09
GABPB1-208ENST00000558970 C1orf115Q9H7X2 142 aa15.64■□□□□ 0.09
GABPB1-208ENST00000558970 CHMP3Q9Y3E7 222 aa15.64■□□□□ 0.09
GABPB1-208ENST00000558970 RNF123Q5XPI4 1314 aa15.64■□□□□ 0.09
GABPB1-208ENST00000558970 CDHR2Q9BYE9 1310 aa15.64■□□□□ 0.09
GABPB1-208ENST00000558970 DPEP1P16444 411 aa15.63■□□□□ 0.09
GABPB1-208ENST00000558970 PDE6BP35913 854 aa15.63■□□□□ 0.09
GABPB1-208ENST00000558970 RPGRQ92834 1020 aaKnown RBP15.63■□□□□ 0.09
GABPB1-208ENST00000558970 ZNF622Q969S3 477 aaKnown RBP eCLIP15.63■□□□□ 0.09
GABPB1-208ENST00000558970 RIC1Q4ADV7 1423 aa15.62■□□□□ 0.09
GABPB1-208ENST00000558970 SLX4Q8IY92 1834 aa15.62■□□□□ 0.09
GABPB1-208ENST00000558970 H0YIN7 160 aa15.62■□□□□ 0.09
GABPB1-208ENST00000558970 PDE8AO60658 829 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms