RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 DYRK1BQ9Y463 629 aa9.73□□□□□ -0.85
CLPX-202ENST00000558103 POLR1AO95602 1720 aaPredicted RBP9.73□□□□□ -0.85
CLPX-202ENST00000558103 RFX1P22670 979 aa9.72□□□□□ -0.85
CLPX-202ENST00000558103 ITGA6P23229 1130 aa9.72□□□□□ -0.85
CLPX-202ENST00000558103 RHBDD1Q8TEB9 315 aa9.72□□□□□ -0.85
CLPX-202ENST00000558103 TIMMDC1Q9NPL8 285 aa9.72□□□□□ -0.85
CLPX-202ENST00000558103 SERPINA10Q9UK55 444 aa9.72□□□□□ -0.85
CLPX-202ENST00000558103 SPAG9O60271 1321 aaKnown RBP9.72□□□□□ -0.85
CLPX-202ENST00000558103 PLA2R1Q13018 1463 aa9.72□□□□□ -0.85
CLPX-202ENST00000558103 MBD5Q9P267 1494 aa9.72□□□□□ -0.85
CLPX-202ENST00000558103 PHKA2P46019 1235 aa9.71□□□□□ -0.86
CLPX-202ENST00000558103 PTK7Q13308 1070 aa9.71□□□□□ -0.86
CLPX-202ENST00000558103 C4orf17Q53FE4 359 aa9.71□□□□□ -0.86
CLPX-202ENST00000558103 NANOS1Q8WY41 292 aaKnown RBP9.71□□□□□ -0.86
CLPX-202ENST00000558103 ZNF594Q96JF6 807 aaPredicted RBP9.71□□□□□ -0.86
CLPX-202ENST00000558103 ADAMTS8Q9UP79 889 aa9.71□□□□□ -0.86
CLPX-202ENST00000558103 ZMYM3Q14202 1370 aa9.71□□□□□ -0.86
CLPX-202ENST00000558103 CCNB3Q8WWL7 1395 aa9.71□□□□□ -0.86
CLPX-202ENST00000558103 HNRNPMP52272 730 aaKnown RBP eCLIP9.7□□□□□ -0.86
CLPX-202ENST00000558103 CRTC2Q53ET0 693 aaPredicted RBP9.7□□□□□ -0.86
CLPX-202ENST00000558103 CCDC97Q96F63 343 aaPredicted RBP9.7□□□□□ -0.86
CLPX-202ENST00000558103 NIFKQ9BYG3 293 aaKnown RBP9.7□□□□□ -0.86
CLPX-202ENST00000558103 IQSEC3Q9UPP2 1182 aaPredicted RBP9.7□□□□□ -0.86
CLPX-202ENST00000558103 RBM19Q9Y4C8 960 aaKnown RBP9.7□□□□□ -0.86
CLPX-202ENST00000558103 MTUS2Q5JR59 1369 aa9.7□□□□□ -0.86
CLPX-202ENST00000558103 PTPRKQ15262 1439 aa9.7□□□□□ -0.86
CLPX-202ENST00000558103 CEP162Q5TB80 1403 aa9.7□□□□□ -0.86
CLPX-202ENST00000558103 TCOF1Q13428 1488 aaKnown RBP9.7□□□□□ -0.86
CLPX-202ENST00000558103 SPATA31D1Q6ZQQ2 1576 aa9.7□□□□□ -0.86
CLPX-202ENST00000558103 DNMT1P26358 1616 aaKnown RBP9.7□□□□□ -0.86
CLPX-202ENST00000558103 FAM196BA6NMK8 535 aa9.69□□□□□ -0.86
CLPX-202ENST00000558103 SFI1A8K8P3 1242 aa9.69□□□□□ -0.86
CLPX-202ENST00000558103 M0R2N6 131 aa9.69□□□□□ -0.86
CLPX-202ENST00000558103 TNS4Q8IZW8 715 aa9.69□□□□□ -0.86
CLPX-202ENST00000558103 VWA5B2Q8N398 1253 aa9.69□□□□□ -0.86
CLPX-202ENST00000558103 SCHIP1Q9P0W5 487 aaPredicted RBP9.69□□□□□ -0.86
CLPX-202ENST00000558103 FAM135AQ9P2D6 1515 aa9.69□□□□□ -0.86
CLPX-202ENST00000558103 CFDP1Q9UEE9 299 aaPredicted RBP9.69□□□□□ -0.86
CLPX-202ENST00000558103 RTEL1-TNFRSF6BF6WH68 1400 aa9.68□□□□□ -0.86
CLPX-202ENST00000558103 F11P03951 625 aa9.68□□□□□ -0.86
CLPX-202ENST00000558103 EPHA4P54764 986 aa9.68□□□□□ -0.86
CLPX-202ENST00000558103 SRPK2P78362 688 aaKnown RBP9.68□□□□□ -0.86
CLPX-202ENST00000558103 CDCA8Q53HL2 280 aa9.68□□□□□ -0.86
CLPX-202ENST00000558103 ZNF295-AS1Q8N0V1 137 aa9.68□□□□□ -0.86
CLPX-202ENST00000558103 GAS2L1Q99501 681 aaPredicted RBP9.68□□□□□ -0.86
CLPX-202ENST00000558103 CUEDC1Q9NWM3 386 aaPredicted RBP9.68□□□□□ -0.86
CLPX-202ENST00000558103 A0A1B0GTH6 734 aa9.67□□□□□ -0.86
CLPX-202ENST00000558103 RNF225M0QZC1 329 aaPredicted RBP9.67□□□□□ -0.86
CLPX-202ENST00000558103 SEC13P55735 322 aa9.67□□□□□ -0.86
CLPX-202ENST00000558103 ANKMY2Q8IV38 441 aa9.67□□□□□ -0.86
CLPX-202ENST00000558103 C1orf115Q9H7X2 142 aa9.67□□□□□ -0.86
CLPX-202ENST00000558103 USP3Q9Y6I4 520 aa9.67□□□□□ -0.86
CLPX-202ENST00000558103 ARHGEF5Q12774 1597 aa9.67□□□□□ -0.86
CLPX-202ENST00000558103 NEURL4Q96JN8 1562 aa9.67□□□□□ -0.86
CLPX-202ENST00000558103 KDM5DQ9BY66 1539 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 CAMSAP2Q08AD1 1489 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 CCDC141Q6ZP82 1450 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 USP17L15C9J2P7 530 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 USP17L10C9JJH3 530 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 USP17L13C9JLJ4 530 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 USP17L12C9JPN9 530 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 USP17L11C9JVI0 530 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 USP17L21D6R901 530 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 USP17L18D6R9N7 530 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 USP17L22D6RA61 530 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 USP17L17D6RBQ6 530 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 USP17L19D6RCP7 530 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 USP17L20D6RJB6 530 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 FOXK2Q01167 660 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 USP17L24Q0WX57 530 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 DPYDQ12882 1025 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 DBN1Q16643 649 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 RIPOR1Q6ZS17 1223 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 SV2AQ7L0J3 742 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 TRIM22Q8IYM9 498 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 GPR161Q8N6U8 529 aaKnown RBP9.66□□□□□ -0.86
CLPX-202ENST00000558103 GMCL1Q96IK5 515 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 A2ML1A8K2U0 1454 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 NCOA2Q15596 1464 aa9.66□□□□□ -0.86
CLPX-202ENST00000558103 ZC3H13Q5T200 1668 aaKnown RBP9.65□□□□□ -0.86
CLPX-202ENST00000558103 ZNF644Q9H582 1327 aaPredicted RBP9.65□□□□□ -0.86
CLPX-202ENST00000558103 RNF17Q9BXT8 1623 aaKnown RBP9.65□□□□□ -0.86
CLPX-202ENST00000558103 TSEN2Q8NCE0 465 aaKnown RBP9.65□□□□□ -0.86
CLPX-202ENST00000558103 CABP1Q9NZU7 370 aa9.65□□□□□ -0.86
CLPX-202ENST00000558103 TIMELESSQ9UNS1 1208 aa9.65□□□□□ -0.86
CLPX-202ENST00000558103 MAST1Q9Y2H9 1570 aa9.64□□□□□ -0.87
CLPX-202ENST00000558103 CDC14CA4D256 554 aa9.64□□□□□ -0.87
CLPX-202ENST00000558103 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.64□□□□□ -0.87
CLPX-202ENST00000558103 H7C1W4 665 aa9.64□□□□□ -0.87
CLPX-202ENST00000558103 MSX1P28360 303 aa9.64□□□□□ -0.87
CLPX-202ENST00000558103 PLA2G4AP47712 749 aa9.64□□□□□ -0.87
CLPX-202ENST00000558103 SLC9A9Q8IVB4 645 aa9.64□□□□□ -0.87
CLPX-202ENST00000558103 CCDC82Q8N4S0 544 aa9.64□□□□□ -0.87
CLPX-202ENST00000558103 ARXQ96QS3 562 aa9.64□□□□□ -0.87
CLPX-202ENST00000558103 PZPP20742 1482 aa9.64□□□□□ -0.87
CLPX-202ENST00000558103 EIF2AK4Q9P2K8 1649 aaKnown RBP9.64□□□□□ -0.87
CLPX-202ENST00000558103 DHX29Q7Z478 1369 aaKnown RBP9.63□□□□□ -0.87
CLPX-202ENST00000558103 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.63□□□□□ -0.87
CLPX-202ENST00000558103 IRS1P35568 1242 aa9.63□□□□□ -0.87
CLPX-202ENST00000558103 TEAD4Q15561 434 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms