RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 SLC16A10Q8TF71 515 aa17.87■□□□□ 0.45
RIPK3-206ENST00000557624 MMP10P09238 476 aa17.86■□□□□ 0.45
RIPK3-206ENST00000557624 TRIM28Q13263 835 aaKnown RBP17.86■□□□□ 0.45
RIPK3-206ENST00000557624 GCKRQ14397 625 aa17.86■□□□□ 0.45
RIPK3-206ENST00000557624 MVPQ14764 893 aaKnown RBP17.86■□□□□ 0.45
RIPK3-206ENST00000557624 PARP10Q53GL7 1025 aa17.86■□□□□ 0.45
RIPK3-206ENST00000557624 CARMIL3Q8ND23 1372 aa17.85■□□□□ 0.45
RIPK3-206ENST00000557624 COL24A1Q17RW2 1714 aa17.85■□□□□ 0.45
RIPK3-206ENST00000557624 RTL5Q5HYW3 569 aaPredicted RBP17.85■□□□□ 0.45
RIPK3-206ENST00000557624 SUSD4Q5VX71 490 aa17.85■□□□□ 0.45
RIPK3-206ENST00000557624 C9orf78Q9NZ63 289 aaPredicted RBP17.85■□□□□ 0.45
RIPK3-206ENST00000557624 TM4SF1P30408 202 aa17.84■□□□□ 0.45
RIPK3-206ENST00000557624 DDR1Q08345 913 aa17.84■□□□□ 0.45
RIPK3-206ENST00000557624 NBPF5PQ86XG9 351 aaPredicted RBP17.84■□□□□ 0.45
RIPK3-206ENST00000557624 JARID2Q92833 1246 aaPredicted RBP17.84■□□□□ 0.45
RIPK3-206ENST00000557624 TRMT112Q9UI30 125 aaKnown RBP17.84■□□□□ 0.45
RIPK3-206ENST00000557624 NPHP1O15259 732 aa17.83■□□□□ 0.45
RIPK3-206ENST00000557624 UBE3BQ7Z3V4 1068 aa17.83■□□□□ 0.45
RIPK3-206ENST00000557624 PPP1R42Q7Z4L9 355 aa17.83■□□□□ 0.45
RIPK3-206ENST00000557624 CRBNQ96SW2 442 aa17.83■□□□□ 0.45
RIPK3-206ENST00000557624 UTP14AQ9BVJ6 771 aaKnown RBP17.83■□□□□ 0.45
RIPK3-206ENST00000557624 MTFR1LQ9H019 292 aa17.83■□□□□ 0.45
RIPK3-206ENST00000557624 ATF5Q9Y2D1 282 aaPredicted RBP17.83■□□□□ 0.45
RIPK3-206ENST00000557624 GRM8O00222 908 aa17.83■□□□□ 0.44
RIPK3-206ENST00000557624 POLRMTO00411 1230 aaKnown RBP17.83■□□□□ 0.44
RIPK3-206ENST00000557624 FAM89AQ96GI7 184 aa17.83■□□□□ 0.44
RIPK3-206ENST00000557624 MEIS3Q99687 375 aa17.83■□□□□ 0.44
RIPK3-206ENST00000557624 USP44Q9H0E7 712 aa17.83■□□□□ 0.44
RIPK3-206ENST00000557624 DDX19BQ9UMR2 479 aa17.83■□□□□ 0.44
RIPK3-206ENST00000557624 NTSR2O95665 410 aa17.82■□□□□ 0.44
RIPK3-206ENST00000557624 SERPINB2P05120 415 aa17.82■□□□□ 0.44
RIPK3-206ENST00000557624 NBPF7P0C2Y1 421 aaPredicted RBP17.82■□□□□ 0.44
RIPK3-206ENST00000557624 GTF2E1P29083 439 aaPredicted RBP17.82■□□□□ 0.44
RIPK3-206ENST00000557624 NUTM1Q86Y26 1132 aa17.82■□□□□ 0.44
RIPK3-206ENST00000557624 PARP3Q9Y6F1 533 aa17.82■□□□□ 0.44
RIPK3-206ENST00000557624 NEFLP07196 543 aa17.81■□□□□ 0.44
RIPK3-206ENST00000557624 SYNE4Q8N205 404 aa17.81■□□□□ 0.44
RIPK3-206ENST00000557624 CNBD1Q8NA66 436 aa17.81■□□□□ 0.44
RIPK3-206ENST00000557624 ZBTB38Q8NAP3 1195 aaPredicted RBP17.81■□□□□ 0.44
RIPK3-206ENST00000557624 NYXQ9GZU5 481 aa17.81■□□□□ 0.44
RIPK3-206ENST00000557624 SH3TC1Q8TE82 1336 aa17.8■□□□□ 0.44
RIPK3-206ENST00000557624 PCCAP05165 728 aaPredicted RBP17.8■□□□□ 0.44
RIPK3-206ENST00000557624 TPTE2Q6XPS3 522 aa17.8■□□□□ 0.44
RIPK3-206ENST00000557624 CCDC24Q8N4L8 307 aa17.8■□□□□ 0.44
RIPK3-206ENST00000557624 IBTKQ9P2D0 1353 aaPredicted RBP17.8■□□□□ 0.44
RIPK3-206ENST00000557624 H7C1W4 665 aa17.8■□□□□ 0.44
RIPK3-206ENST00000557624 ZBTB7BO15156 539 aaPredicted RBP17.8■□□□□ 0.44
RIPK3-206ENST00000557624 UBTFL1P0CB47 393 aaPredicted RBP17.8■□□□□ 0.44
RIPK3-206ENST00000557624 GNAI3P08754 354 aa17.79■□□□□ 0.44
RIPK3-206ENST00000557624 ERFEQ4G0M1 354 aa17.79■□□□□ 0.44
RIPK3-206ENST00000557624 EXOC6Q8TAG9 804 aa17.79■□□□□ 0.44
RIPK3-206ENST00000557624 ABCC12Q96J65 1359 aa17.78■□□□□ 0.44
RIPK3-206ENST00000557624 UTYO14607 1347 aa17.78■□□□□ 0.44
RIPK3-206ENST00000557624 POLD1P28340 1107 aa17.78■□□□□ 0.44
RIPK3-206ENST00000557624 PRR5LQ6MZQ0 368 aa17.78■□□□□ 0.44
RIPK3-206ENST00000557624 IRS4O14654 1257 aaPredicted RBP17.77■□□□□ 0.44
RIPK3-206ENST00000557624 HCLS1P14317 486 aaPredicted RBP17.77■□□□□ 0.44
RIPK3-206ENST00000557624 CASP7P55210 303 aa17.77■□□□□ 0.44
RIPK3-206ENST00000557624 C1orf115Q9H7X2 142 aa17.77■□□□□ 0.44
RIPK3-206ENST00000557624 ST5P78524 1137 aa17.76■□□□□ 0.43
RIPK3-206ENST00000557624 ANP32EQ9BTT0 268 aa17.76■□□□□ 0.43
RIPK3-206ENST00000557624 CHMP4BQ9H444 224 aaKnown RBP17.76■□□□□ 0.43
RIPK3-206ENST00000557624 LRRFIP2Q9Y608 721 aaKnown RBP17.76■□□□□ 0.43
RIPK3-206ENST00000557624 NRXN2Q9P2S2 1712 aa17.76■□□□□ 0.43
RIPK3-206ENST00000557624 CDHR2Q9BYE9 1310 aa17.76■□□□□ 0.43
RIPK3-206ENST00000557624 SUCLG2Q96I99 432 aa17.76■□□□□ 0.43
RIPK3-206ENST00000557624 ZBTB40Q9NUA8 1239 aa17.76■□□□□ 0.43
RIPK3-206ENST00000557624 GNAI2P04899 355 aa17.75■□□□□ 0.43
RIPK3-206ENST00000557624 SPON1Q9HCB6 807 aa17.75■□□□□ 0.43
RIPK3-206ENST00000557624 DDX60Q8IY21 1712 aaKnown RBP17.75■□□□□ 0.43
RIPK3-206ENST00000557624 BCL11AQ9H165 835 aa17.74■□□□□ 0.43
RIPK3-206ENST00000557624 HDAC5Q9UQL6 1122 aa17.74■□□□□ 0.43
RIPK3-206ENST00000557624 MYH3P11055 1940 aa17.74■□□□□ 0.43
RIPK3-206ENST00000557624 LAMB2P55268 1798 aa17.74■□□□□ 0.43
RIPK3-206ENST00000557624 HSP90B1P14625 803 aaKnown RBP17.73■□□□□ 0.43
RIPK3-206ENST00000557624 PTGER2P43116 358 aa17.73■□□□□ 0.43
RIPK3-206ENST00000557624 EPHA10Q5JZY3 1008 aa17.73■□□□□ 0.43
RIPK3-206ENST00000557624 KAZALD1Q96I82 304 aa17.73■□□□□ 0.43
RIPK3-206ENST00000557624 SGIP1Q9BQI5 828 aa17.73■□□□□ 0.43
RIPK3-206ENST00000557624 BICC1Q9H694 974 aaKnown RBP17.73■□□□□ 0.43
RIPK3-206ENST00000557624 TNRC6CQ9HCJ0 1690 aaKnown RBP17.73■□□□□ 0.43
RIPK3-206ENST00000557624 PDE8AO60658 829 aa17.72■□□□□ 0.43
RIPK3-206ENST00000557624 SLC10A5Q5PT55 438 aa17.72■□□□□ 0.43
RIPK3-206ENST00000557624 ANKRD31Q8N7Z5 1873 aa17.72■□□□□ 0.43
RIPK3-206ENST00000557624 C3orf67Q6ZVT6 689 aa17.72■□□□□ 0.43
RIPK3-206ENST00000557624 CCDC85AQ96PX6 553 aaPredicted RBP17.72■□□□□ 0.43
RIPK3-206ENST00000557624 PLA2G12BQ9BX93 195 aa17.72■□□□□ 0.43
RIPK3-206ENST00000557624 CTSWP56202 376 aa17.71■□□□□ 0.43
RIPK3-206ENST00000557624 FOXO4P98177 505 aa17.71■□□□□ 0.43
RIPK3-206ENST00000557624 NLRP3Q96P20 1036 aa17.71■□□□□ 0.43
RIPK3-206ENST00000557624 CHMP3Q9Y3E7 222 aa17.71■□□□□ 0.43
RIPK3-206ENST00000557624 LMBR1LQ6UX01 489 aa17.7■□□□□ 0.42
RIPK3-206ENST00000557624 KLHL34Q8N239 644 aa17.7■□□□□ 0.42
RIPK3-206ENST00000557624 ANKRD44Q8N8A2 993 aa17.7■□□□□ 0.42
RIPK3-206ENST00000557624 BRIP1Q9BX63 1249 aa17.7■□□□□ 0.42
RIPK3-206ENST00000557624 PPP1R1BQ9UD71 204 aaPredicted RBP17.7■□□□□ 0.42
RIPK3-206ENST00000557624 C10orf71Q711Q0 1435 aa17.7■□□□□ 0.42
RIPK3-206ENST00000557624 RIC1Q4ADV7 1423 aa17.69■□□□□ 0.42
RIPK3-206ENST00000557624 TTLL11Q8NHH1 800 aa17.69■□□□□ 0.42
RIPK3-206ENST00000557624 PDE6BP35913 854 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms