RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 TEX13AQ9BXU3 409 aaPredicted RBP17.13■□□□□ 0.33
PSEN1-220ENST00000557037 HEG1Q9ULI3 1381 aa17.13■□□□□ 0.33
PSEN1-220ENST00000557037 TCERG1O14776 1098 aaKnown RBP17.12■□□□□ 0.33
PSEN1-220ENST00000557037 GMPSP49915 693 aaPredicted RBP17.12■□□□□ 0.33
PSEN1-220ENST00000557037 RGMBQ6NW40 437 aa17.12■□□□□ 0.33
PSEN1-220ENST00000557037 USP48Q86UV5 1035 aa17.12■□□□□ 0.33
PSEN1-220ENST00000557037 CUL9Q8IWT3 2517 aa17.11■□□□□ 0.33
PSEN1-220ENST00000557037 IL13P35225 146 aa17.11■□□□□ 0.33
PSEN1-220ENST00000557037 HIRAP54198 1017 aaPredicted RBP17.11■□□□□ 0.33
PSEN1-220ENST00000557037 CDC37L1Q7L3B6 337 aa17.11■□□□□ 0.33
PSEN1-220ENST00000557037 PGAP2Q9UHJ9 254 aa17.11■□□□□ 0.33
PSEN1-220ENST00000557037 FXR1P51114 621 aaKnown RBP eCLIP17.1■□□□□ 0.33
PSEN1-220ENST00000557037 MTHFSDQ2M296 383 aaKnown RBP17.1■□□□□ 0.33
PSEN1-220ENST00000557037 POLR3GLQ9BT43 218 aa17.1■□□□□ 0.33
PSEN1-220ENST00000557037 NIP7Q9Y221 180 aaKnown RBP eCLIP17.1■□□□□ 0.33
PSEN1-220ENST00000557037 AKAP11Q9UKA4 1901 aa17.09■□□□□ 0.33
PSEN1-220ENST00000557037 PPIP5K2O43314 1243 aa17.09■□□□□ 0.33
PSEN1-220ENST00000557037 HMOX1P09601 288 aa17.09■□□□□ 0.33
PSEN1-220ENST00000557037 CXCL9Q07325 125 aa17.09■□□□□ 0.33
PSEN1-220ENST00000557037 CC2D2BQ6DHV5 1058 aa17.09■□□□□ 0.33
PSEN1-220ENST00000557037 TRPM4Q8TD43 1214 aa17.09■□□□□ 0.33
PSEN1-220ENST00000557037 NPC1L1Q9UHC9 1359 aa17.09■□□□□ 0.33
PSEN1-220ENST00000557037 GTF2E1P29083 439 aaPredicted RBP17.08■□□□□ 0.32
PSEN1-220ENST00000557037 ZNF157P51786 506 aaPredicted RBP17.08■□□□□ 0.32
PSEN1-220ENST00000557037 ZNF790Q6PG37 636 aa17.08■□□□□ 0.32
PSEN1-220ENST00000557037 CLEC4GQ6UXB4 293 aa17.08■□□□□ 0.32
PSEN1-220ENST00000557037 CCDC102AQ96A19 550 aa17.08■□□□□ 0.32
PSEN1-220ENST00000557037 ZNF652Q9Y2D9 606 aa17.08■□□□□ 0.32
PSEN1-220ENST00000557037 TRIOBPQ9H2D6 2365 aa17.08■□□□□ 0.32
PSEN1-220ENST00000557037 SHTN1A0MZ66 631 aa17.07■□□□□ 0.32
PSEN1-220ENST00000557037 AOC3Q16853 763 aa17.07■□□□□ 0.32
PSEN1-220ENST00000557037 ZC3H15Q8WU90 426 aaKnown RBP17.07■□□□□ 0.32
PSEN1-220ENST00000557037 CSRNP1Q96S65 589 aa17.07■□□□□ 0.32
PSEN1-220ENST00000557037 BCL2L13Q9BXK5 485 aa17.07■□□□□ 0.32
PSEN1-220ENST00000557037 CEP290O15078 2479 aa17.07■□□□□ 0.32
PSEN1-220ENST00000557037 FMNL2Q96PY5 1086 aa17.06■□□□□ 0.32
PSEN1-220ENST00000557037 GBA2Q9HCG7 927 aaPredicted RBP17.06■□□□□ 0.32
PSEN1-220ENST00000557037 HDAC9Q9UKV0 1011 aa17.06■□□□□ 0.32
PSEN1-220ENST00000557037 C2orf69Q8N8R5 385 aa17.05■□□□□ 0.32
PSEN1-220ENST00000557037 RPGRQ92834 1020 aaKnown RBP17.05■□□□□ 0.32
PSEN1-220ENST00000557037 ZNRF3Q9ULT6 936 aa17.05■□□□□ 0.32
PSEN1-220ENST00000557037 ABCC12Q96J65 1359 aa17.04■□□□□ 0.32
PSEN1-220ENST00000557037 DLL1O00548 723 aa17.04■□□□□ 0.32
PSEN1-220ENST00000557037 KCNQ3O43525 872 aa17.04■□□□□ 0.32
PSEN1-220ENST00000557037 TEFQ10587 303 aa17.04■□□□□ 0.32
PSEN1-220ENST00000557037 PKN2Q16513 984 aaKnown RBP17.04■□□□□ 0.32
PSEN1-220ENST00000557037 CRY2Q49AN0 593 aa17.04■□□□□ 0.32
PSEN1-220ENST00000557037 MORC1Q86VD1 984 aa17.04■□□□□ 0.32
PSEN1-220ENST00000557037 NUTM1Q86Y26 1132 aa17.04■□□□□ 0.32
PSEN1-220ENST00000557037 PPEF1O14829 653 aaPredicted RBP17.03■□□□□ 0.32
PSEN1-220ENST00000557037 RAD17O75943 681 aa17.03■□□□□ 0.32
PSEN1-220ENST00000557037 USP16Q9Y5T5 823 aa17.03■□□□□ 0.32
PSEN1-220ENST00000557037 PRAMEF22A3QJZ6 481 aa17.02■□□□□ 0.32
PSEN1-220ENST00000557037 SLC10A3P09131 477 aa17.02■□□□□ 0.32
PSEN1-220ENST00000557037 GRIPAP1Q4V328 841 aa17.02■□□□□ 0.32
PSEN1-220ENST00000557037 KRT26Q7Z3Y9 468 aa17.02■□□□□ 0.32
PSEN1-220ENST00000557037 IL17REQ8NFR9 667 aa17.02■□□□□ 0.32
PSEN1-220ENST00000557037 ZNF296Q8WUU4 475 aaPredicted RBP17.02■□□□□ 0.32
PSEN1-220ENST00000557037 CNOT7Q9UIV1 285 aaKnown RBP17.02■□□□□ 0.32
PSEN1-220ENST00000557037 ADM5C9JUS6 153 aa17.01■□□□□ 0.31
PSEN1-220ENST00000557037 HOXA10P31260 410 aaPredicted RBP17.01■□□□□ 0.31
PSEN1-220ENST00000557037 HLFQ16534 295 aa17.01■□□□□ 0.31
PSEN1-220ENST00000557037 POLR2AP24928 1970 aaKnown RBP17■□□□□ 0.31
PSEN1-220ENST00000557037 KIAA0100Q14667 2235 aaKnown RBP17■□□□□ 0.31
PSEN1-220ENST00000557037 TBC1D8O95759 1140 aa17■□□□□ 0.31
PSEN1-220ENST00000557037 H7C1D1 291 aa16.99■□□□□ 0.31
PSEN1-220ENST00000557037 FBXO46Q6PJ61 603 aaPredicted RBP16.99■□□□□ 0.31
PSEN1-220ENST00000557037 SAMD7Q7Z3H4 446 aa16.99■□□□□ 0.31
PSEN1-220ENST00000557037 MICALL2Q8IY33 904 aa16.99■□□□□ 0.31
PSEN1-220ENST00000557037 CDHR2Q9BYE9 1310 aa16.98■□□□□ 0.31
PSEN1-220ENST00000557037 TNIP1Q15025 636 aa16.98■□□□□ 0.31
PSEN1-220ENST00000557037 RBM17Q96I25 401 aaKnown RBP16.98■□□□□ 0.31
PSEN1-220ENST00000557037 NBPF26B4DH59 902 aa16.97■□□□□ 0.31
PSEN1-220ENST00000557037 TBC1D10BQ4KMP7 808 aaPredicted RBP16.97■□□□□ 0.31
PSEN1-220ENST00000557037 NBPF10Q6P3W6 841 aaKnown RBP16.97■□□□□ 0.31
PSEN1-220ENST00000557037 CRAMP1Q96RY5 1269 aa16.97■□□□□ 0.31
PSEN1-220ENST00000557037 PANK3Q9H999 370 aa16.97■□□□□ 0.31
PSEN1-220ENST00000557037 COLQQ9Y215 455 aaPredicted RBP16.97■□□□□ 0.31
PSEN1-220ENST00000557037 POTEFA5A3E0 1075 aa16.96■□□□□ 0.31
PSEN1-220ENST00000557037 EGFRP00533 1210 aa16.96■□□□□ 0.31
PSEN1-220ENST00000557037 C3orf67Q6ZVT6 689 aa16.96■□□□□ 0.31
PSEN1-220ENST00000557037 RASAL3Q86YV0 1011 aa16.96■□□□□ 0.31
PSEN1-220ENST00000557037 NYXQ9GZU5 481 aa16.96■□□□□ 0.31
PSEN1-220ENST00000557037 TMX4Q9H1E5 349 aaPredicted RBP16.96■□□□□ 0.31
PSEN1-220ENST00000557037 ZBTB12Q9Y330 459 aaPredicted RBP16.96■□□□□ 0.31
PSEN1-220ENST00000557037 BTBD11A6QL63 1104 aa16.95■□□□□ 0.3
PSEN1-220ENST00000557037 RBM26Q5T8P6 1007 aaKnown RBP16.95■□□□□ 0.3
PSEN1-220ENST00000557037 SUPT20HQ8NEM7 779 aa16.95■□□□□ 0.3
PSEN1-220ENST00000557037 DCPSQ96C86 337 aaKnown RBP16.95■□□□□ 0.3
PSEN1-220ENST00000557037 VPS33BQ9H267 617 aa16.95■□□□□ 0.3
PSEN1-220ENST00000557037 KIF7Q2M1P5 1343 aa16.95■□□□□ 0.3
PSEN1-220ENST00000557037 SIPA1L3O60292 1781 aaPredicted RBP16.94■□□□□ 0.3
PSEN1-220ENST00000557037 GNAT3A8MTJ3 354 aa16.94■□□□□ 0.3
PSEN1-220ENST00000557037 REM2Q8IYK8 340 aaPredicted RBP16.94■□□□□ 0.3
PSEN1-220ENST00000557037 SLC17A8Q8NDX2 589 aa16.94■□□□□ 0.3
PSEN1-220ENST00000557037 ATP6V0A2Q9Y487 856 aa16.94■□□□□ 0.3
PSEN1-220ENST00000557037 RIC1Q4ADV7 1423 aa16.94■□□□□ 0.3
PSEN1-220ENST00000557037 MKI67P46013 3256 aaKnown RBP16.93■□□□□ 0.3
PSEN1-220ENST00000557037 YDJCA8MPS7 323 aa16.93■□□□□ 0.3
PSEN1-220ENST00000557037 GPR25O00155 361 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms