RNA–Protein interactions for RNA: ENST00000556371.1

ITGA7-216, Transcript of integrin subunit alpha 7, humanhuman

TSL 4

Gene ITGA7, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-216ENST00000556371 ZBTB38Q8NAP3 1195 aaPredicted RBP12.27□□□□□ -0.45
ITGA7-216ENST00000556371 IL1RAPL2Q9NP60 686 aa12.27□□□□□ -0.45
ITGA7-216ENST00000556371 CCNL1Q9UK58 526 aaPredicted RBP12.27□□□□□ -0.45
ITGA7-216ENST00000556371 AFDNP55196 1824 aaKnown RBP12.26□□□□□ -0.45
ITGA7-216ENST00000556371 PDE1AP54750 535 aa12.26□□□□□ -0.45
ITGA7-216ENST00000556371 TTC22Q5TAA0 569 aa12.26□□□□□ -0.45
ITGA7-216ENST00000556371 ERC1Q8IUD2 1116 aa12.26□□□□□ -0.45
ITGA7-216ENST00000556371 FBXO41Q8TF61 875 aa12.26□□□□□ -0.45
ITGA7-216ENST00000556371 FAM89AQ96GI7 184 aa12.26□□□□□ -0.45
ITGA7-216ENST00000556371 OSBPL3Q9H4L5 887 aa12.26□□□□□ -0.45
ITGA7-216ENST00000556371 COPRSQ9NQ92 184 aa12.26□□□□□ -0.45
ITGA7-216ENST00000556371 SALL3Q9BXA9 1300 aa12.26□□□□□ -0.45
ITGA7-216ENST00000556371 CNTNAP4Q9C0A0 1308 aa12.26□□□□□ -0.45
ITGA7-216ENST00000556371 CICQ96RK0 1608 aaPredicted RBP12.26□□□□□ -0.45
ITGA7-216ENST00000556371 BTAF1O14981 1849 aa12.25□□□□□ -0.45
ITGA7-216ENST00000556371 RPS6KA4O75676 772 aa12.25□□□□□ -0.45
ITGA7-216ENST00000556371 SASH1O94885 1247 aa12.25□□□□□ -0.45
ITGA7-216ENST00000556371 GSPT1P15170 499 aaKnown RBP12.25□□□□□ -0.45
ITGA7-216ENST00000556371 RXRBP28702 533 aa12.25□□□□□ -0.45
ITGA7-216ENST00000556371 NUTM1Q86Y26 1132 aa12.25□□□□□ -0.45
ITGA7-216ENST00000556371 SYNE4Q8N205 404 aa12.25□□□□□ -0.45
ITGA7-216ENST00000556371 KLHDC4Q8TBB5 520 aa12.25□□□□□ -0.45
ITGA7-216ENST00000556371 STAP2Q9UGK3 403 aa12.25□□□□□ -0.45
ITGA7-216ENST00000556371 ZNF831Q5JPB2 1677 aa12.25□□□□□ -0.45
ITGA7-216ENST00000556371 RREB1Q92766 1687 aa12.25□□□□□ -0.45
ITGA7-216ENST00000556371 TRIM37O94972 964 aa12.24□□□□□ -0.45
ITGA7-216ENST00000556371 PTPN12Q05209 780 aaKnown RBP12.24□□□□□ -0.45
ITGA7-216ENST00000556371 SMIM5Q71RC9 77 aa12.24□□□□□ -0.45
ITGA7-216ENST00000556371 PLA2G12BQ9BX93 195 aa12.24□□□□□ -0.45
ITGA7-216ENST00000556371 SIL1Q9H173 461 aa12.24□□□□□ -0.45
ITGA7-216ENST00000556371 TRMT112Q9UI30 125 aaKnown RBP12.24□□□□□ -0.45
ITGA7-216ENST00000556371 CHMP3Q9Y3E7 222 aa12.24□□□□□ -0.45
ITGA7-216ENST00000556371 MYH14Q7Z406 1995 aaKnown RBP12.23□□□□□ -0.45
ITGA7-216ENST00000556371 UBN2Q6ZU65 1347 aa12.23□□□□□ -0.45
ITGA7-216ENST00000556371 CDHR2Q9BYE9 1310 aa12.23□□□□□ -0.45
ITGA7-216ENST00000556371 CSF1RP07333 972 aa12.23□□□□□ -0.45
ITGA7-216ENST00000556371 MX1P20591 662 aa12.23□□□□□ -0.45
ITGA7-216ENST00000556371 SUSD4Q5VX71 490 aa12.23□□□□□ -0.45
ITGA7-216ENST00000556371 CLASRPQ8N2M8 674 aaKnown RBP12.23□□□□□ -0.45
ITGA7-216ENST00000556371 RGS17Q9UGC6 210 aaPredicted RBP12.23□□□□□ -0.45
ITGA7-216ENST00000556371 SBF2Q86WG5 1849 aa12.23□□□□□ -0.45
ITGA7-216ENST00000556371 GNPATO15228 680 aa12.22□□□□□ -0.45
ITGA7-216ENST00000556371 SDSP20132 328 aa12.22□□□□□ -0.45
ITGA7-216ENST00000556371 PARP10Q53GL7 1025 aa12.22□□□□□ -0.45
ITGA7-216ENST00000556371 TSHZ3Q63HK5 1081 aa12.22□□□□□ -0.45
ITGA7-216ENST00000556371 CLEC4GQ6UXB4 293 aa12.22□□□□□ -0.45
ITGA7-216ENST00000556371 LRRC4BQ9NT99 713 aa12.22□□□□□ -0.45
ITGA7-216ENST00000556371 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.22□□□□□ -0.45
ITGA7-216ENST00000556371 COL5A3P25940 1745 aaPredicted RBP12.22□□□□□ -0.45
ITGA7-216ENST00000556371 BRWD3Q6RI45 1802 aa12.21□□□□□ -0.45
ITGA7-216ENST00000556371 FAM177BA6PVY3 158 aa12.21□□□□□ -0.45
ITGA7-216ENST00000556371 IRS4O14654 1257 aaPredicted RBP12.21□□□□□ -0.45
ITGA7-216ENST00000556371 UTP14AQ9BVJ6 771 aaKnown RBP12.21□□□□□ -0.45
ITGA7-216ENST00000556371 NARFQ9UHQ1 456 aa12.21□□□□□ -0.45
ITGA7-216ENST00000556371 NIP7Q9Y221 180 aaKnown RBP eCLIP12.21□□□□□ -0.45
ITGA7-216ENST00000556371 ZNF652Q9Y2D9 606 aa12.21□□□□□ -0.45
ITGA7-216ENST00000556371 RTCBQ9Y3I0 505 aaKnown RBP12.21□□□□□ -0.45
ITGA7-216ENST00000556371 AOX1Q06278 1338 aa12.2□□□□□ -0.46
ITGA7-216ENST00000556371 RGL2O15211 777 aa12.2□□□□□ -0.46
ITGA7-216ENST00000556371 PDE8AO60658 829 aa12.2□□□□□ -0.46
ITGA7-216ENST00000556371 CDC45O75419 566 aa12.2□□□□□ -0.46
ITGA7-216ENST00000556371 IFIT2P09913 472 aaKnown RBP12.2□□□□□ -0.46
ITGA7-216ENST00000556371 TFCP2Q12800 502 aa12.2□□□□□ -0.46
ITGA7-216ENST00000556371 CCDC57Q2TAC2 916 aa12.2□□□□□ -0.46
ITGA7-216ENST00000556371 SLC27A3Q5K4L6 730 aa12.2□□□□□ -0.46
ITGA7-216ENST00000556371 POTEAQ6S8J7 498 aa12.2□□□□□ -0.46
ITGA7-216ENST00000556371 TBC1D9Q6ZT07 1266 aa12.2□□□□□ -0.46
ITGA7-216ENST00000556371 ATG9AQ7Z3C6 839 aa12.2□□□□□ -0.46
ITGA7-216ENST00000556371 AACSQ86V21 672 aa12.2□□□□□ -0.46
ITGA7-216ENST00000556371 TTLL11Q8NHH1 800 aa12.2□□□□□ -0.46
ITGA7-216ENST00000556371 ARHGEF1Q92888 912 aaKnown RBP12.2□□□□□ -0.46
ITGA7-216ENST00000556371 EAF2Q96CJ1 260 aaPredicted RBP12.2□□□□□ -0.46
ITGA7-216ENST00000556371 ZNF594Q96JF6 807 aaPredicted RBP12.2□□□□□ -0.46
ITGA7-216ENST00000556371 BCL2L12Q9HB09 334 aa12.2□□□□□ -0.46
ITGA7-216ENST00000556371 NUP98P52948 1817 aa12.2□□□□□ -0.46
ITGA7-216ENST00000556371 USP42Q9H9J4 1324 aaKnown RBP12.19□□□□□ -0.46
ITGA7-216ENST00000556371 EYA2O00167 538 aa12.19□□□□□ -0.46
ITGA7-216ENST00000556371 TRAPPC3LQ5T215 181 aa12.19□□□□□ -0.46
ITGA7-216ENST00000556371 USPL1Q5W0Q7 1092 aa12.19□□□□□ -0.46
ITGA7-216ENST00000556371 AMIGO3Q86WK7 504 aa12.19□□□□□ -0.46
ITGA7-216ENST00000556371 AK7Q96M32 723 aa12.19□□□□□ -0.46
ITGA7-216ENST00000556371 CCDC85AQ96PX6 553 aaPredicted RBP12.19□□□□□ -0.46
ITGA7-216ENST00000556371 CCDC8Q9H0W5 538 aaPredicted RBP12.19□□□□□ -0.46
ITGA7-216ENST00000556371 SRP68Q9UHB9 627 aaKnown RBP12.19□□□□□ -0.46
ITGA7-216ENST00000556371 SH3TC1Q8TE82 1336 aa12.18□□□□□ -0.46
ITGA7-216ENST00000556371 LY75O60449 1722 aa12.18□□□□□ -0.46
ITGA7-216ENST00000556371 ZPR1O75312 459 aa12.18□□□□□ -0.46
ITGA7-216ENST00000556371 CIAO1O76071 339 aa12.18□□□□□ -0.46
ITGA7-216ENST00000556371 NTSR2O95665 410 aa12.18□□□□□ -0.46
ITGA7-216ENST00000556371 HCLS1P14317 486 aaPredicted RBP12.18□□□□□ -0.46
ITGA7-216ENST00000556371 ANP32AP39687 249 aaKnown RBP12.18□□□□□ -0.46
ITGA7-216ENST00000556371 IL15P40933 162 aaPredicted RBP12.18□□□□□ -0.46
ITGA7-216ENST00000556371 CTSWP56202 376 aa12.18□□□□□ -0.46
ITGA7-216ENST00000556371 IFIT5Q13325 482 aaKnown RBP12.18□□□□□ -0.46
ITGA7-216ENST00000556371 LRRC24Q50LG9 513 aa12.18□□□□□ -0.46
ITGA7-216ENST00000556371 TBC1D9BQ66K14 1250 aa12.18□□□□□ -0.46
ITGA7-216ENST00000556371 PROM2Q8N271 834 aa12.18□□□□□ -0.46
ITGA7-216ENST00000556371 PI4K2BQ8TCG2 481 aa12.18□□□□□ -0.46
ITGA7-216ENST00000556371 PUS3Q9BZE2 481 aaKnown RBP12.18□□□□□ -0.46
ITGA7-216ENST00000556371 UPF2Q9HAU5 1272 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms