RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 UNC13BO14795 1591 aa6.83□□□□□ -1.32
ATXN3-237ENST00000556274 CEP170BQ9Y4F5 1589 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-237ENST00000556274 CLDN10P78369 228 aa6.83□□□□□ -1.32
ATXN3-237ENST00000556274 IDI1Q13907 227 aa6.83□□□□□ -1.32
ATXN3-237ENST00000556274 ZNF326Q5BKZ1 582 aaKnown RBP6.83□□□□□ -1.32
ATXN3-237ENST00000556274 ESCO1Q5FWF5 840 aa6.83□□□□□ -1.32
ATXN3-237ENST00000556274 LARP1Q6PKG0 1096 aaKnown RBP6.83□□□□□ -1.32
ATXN3-237ENST00000556274 TXNDC2Q86VQ3 553 aa6.83□□□□□ -1.32
ATXN3-237ENST00000556274 ZNF594Q96JF6 807 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-237ENST00000556274 EID1Q9Y6B2 187 aa6.83□□□□□ -1.32
ATXN3-237ENST00000556274 SPHKAPQ2M3C7 1700 aa6.83□□□□□ -1.32
ATXN3-237ENST00000556274 UBR1Q8IWV7 1749 aa6.83□□□□□ -1.32
ATXN3-237ENST00000556274 ZNF142P52746 1687 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-237ENST00000556274 IQGAP3Q86VI3 1631 aa6.83□□□□□ -1.32
ATXN3-237ENST00000556274 UGGT1Q9NYU2 1555 aa6.82□□□□□ -1.32
ATXN3-237ENST00000556274 PRDM15P57071 1507 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-237ENST00000556274 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-237ENST00000556274 FIGNL2A6NMB9 653 aa6.82□□□□□ -1.32
ATXN3-237ENST00000556274 TTLL8A6PVC2 850 aa6.82□□□□□ -1.32
ATXN3-237ENST00000556274 ZBTB7BO15156 539 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-237ENST00000556274 GDF10P55107 478 aa6.82□□□□□ -1.32
ATXN3-237ENST00000556274 CLN3Q13286 438 aa6.82□□□□□ -1.32
ATXN3-237ENST00000556274 CCDC102BQ68D86 513 aa6.82□□□□□ -1.32
ATXN3-237ENST00000556274 TPCN2Q8NHX9 752 aa6.82□□□□□ -1.32
ATXN3-237ENST00000556274 CNKSR1Q969H4 720 aa6.82□□□□□ -1.32
ATXN3-237ENST00000556274 XAGE2Q96GT9 111 aa6.82□□□□□ -1.32
ATXN3-237ENST00000556274 ESYT1Q9BSJ8 1104 aa6.82□□□□□ -1.32
ATXN3-237ENST00000556274 ETNK1Q9HBU6 452 aa6.82□□□□□ -1.32
ATXN3-237ENST00000556274 RBM19Q9Y4C8 960 aaKnown RBP6.82□□□□□ -1.32
ATXN3-237ENST00000556274 NAIPQ13075 1403 aa6.82□□□□□ -1.32
ATXN3-237ENST00000556274 FAM135AQ9P2D6 1515 aa6.81□□□□□ -1.32
ATXN3-237ENST00000556274 SOS2Q07890 1332 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-237ENST00000556274 A2ML1A8K2U0 1454 aa6.81□□□□□ -1.32
ATXN3-237ENST00000556274 ERVK-7P63135 1459 aa6.81□□□□□ -1.32
ATXN3-237ENST00000556274 MAN1A2O60476 641 aa6.81□□□□□ -1.32
ATXN3-237ENST00000556274 PPP1R15AO75807 674 aaPredicted RBP6.81□□□□□ -1.32
ATXN3-237ENST00000556274 IL2RAP01589 272 aa6.81□□□□□ -1.32
ATXN3-237ENST00000556274 INHAP05111 366 aa6.81□□□□□ -1.32
ATXN3-237ENST00000556274 SCNN1DP51172 638 aa6.81□□□□□ -1.32
ATXN3-237ENST00000556274 LARGE2Q8N3Y3 721 aa6.81□□□□□ -1.32
ATXN3-237ENST00000556274 SERTAD1Q9UHV2 236 aa6.81□□□□□ -1.32
ATXN3-237ENST00000556274 SETD5Q9C0A6 1442 aa6.81□□□□□ -1.32
ATXN3-237ENST00000556274 TMEM229AB2RXF0 380 aa6.8□□□□□ -1.32
ATXN3-237ENST00000556274 RNF144AP50876 292 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-237ENST00000556274 CENPCQ03188 943 aa6.8□□□□□ -1.32
ATXN3-237ENST00000556274 CRTC2Q53ET0 693 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-237ENST00000556274 SLC27A3Q5K4L6 730 aa6.8□□□□□ -1.32
ATXN3-237ENST00000556274 SPATA31D1Q6ZQQ2 1576 aa6.8□□□□□ -1.32
ATXN3-237ENST00000556274 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.8□□□□□ -1.32
ATXN3-237ENST00000556274 MPHOSPH9Q99550 1183 aa6.8□□□□□ -1.32
ATXN3-237ENST00000556274 SLC52A1Q9NWF4 448 aa6.8□□□□□ -1.32
ATXN3-237ENST00000556274 KIAA1024Q9UPX6 916 aa6.8□□□□□ -1.32
ATXN3-237ENST00000556274 EFCAB6Q5THR3 1501 aa6.8□□□□□ -1.32
ATXN3-237ENST00000556274 NLRP1Q9C000 1473 aa6.79□□□□□ -1.32
ATXN3-237ENST00000556274 VWDEQ8N2E2 1590 aa6.79□□□□□ -1.32
ATXN3-237ENST00000556274 SOBPA7XYQ1 873 aa6.79□□□□□ -1.32
ATXN3-237ENST00000556274 GPC1P35052 558 aa6.79□□□□□ -1.32
ATXN3-237ENST00000556274 RGL3Q3MIN7 710 aa6.79□□□□□ -1.32
ATXN3-237ENST00000556274 XP32Q5T750 250 aa6.79□□□□□ -1.32
ATXN3-237ENST00000556274 FOXD4L5Q5VV16 416 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-237ENST00000556274 RNF217Q8TC41 542 aa6.79□□□□□ -1.32
ATXN3-237ENST00000556274 PBXIP1Q96AQ6 731 aa6.79□□□□□ -1.32
ATXN3-237ENST00000556274 SYNMO15061 1565 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 HFM1A2PYH4 1435 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 ARHGAP31Q2M1Z3 1444 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 FAM196BA6NMK8 535 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 SFI1A8K8P3 1242 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 USP17L15C9J2P7 530 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 USP17L10C9JJH3 530 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 USP17L13C9JLJ4 530 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 USP17L12C9JPN9 530 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 USP17L11C9JVI0 530 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 USP17L21D6R901 530 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 USP17L18D6R9N7 530 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 USP17L22D6RA61 530 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 USP17L17D6RBQ6 530 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 USP17L19D6RCP7 530 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 USP17L20D6RJB6 530 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 BACH1O14867 736 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 GTF2E1P29083 439 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-237ENST00000556274 SRPK2P78362 688 aaKnown RBP6.78□□□□□ -1.32
ATXN3-237ENST00000556274 USP17L24Q0WX57 530 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 TRIM26Q12899 539 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-237ENST00000556274 PTK7Q13308 1070 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 PRICKLE2Q7Z3G6 844 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 SIX5Q8N196 739 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 TMEM151AQ8N4L1 468 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 SLC26A8Q96RN1 970 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 ZSCAN10Q96SZ4 725 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-237ENST00000556274 ZNF358Q9NW07 568 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 DNMT3LQ9UJW3 386 aa6.78□□□□□ -1.32
ATXN3-237ENST00000556274 IQGAP1P46940 1657 aa6.77□□□□□ -1.32
ATXN3-237ENST00000556274 LMTK2Q8IWU2 1503 aa6.77□□□□□ -1.33
ATXN3-237ENST00000556274 WASLO00401 505 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-237ENST00000556274 LTKP29376 864 aa6.77□□□□□ -1.33
ATXN3-237ENST00000556274 SMTNP53814 917 aa6.77□□□□□ -1.33
ATXN3-237ENST00000556274 SEC13P55735 322 aa6.77□□□□□ -1.33
ATXN3-237ENST00000556274 DPYDQ12882 1025 aa6.77□□□□□ -1.33
ATXN3-237ENST00000556274 TLR1Q15399 786 aa6.77□□□□□ -1.33
ATXN3-237ENST00000556274 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms