RNA–Protein interactions for RNA: ENST00000555632.5

GABRB3-209, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-209ENST00000555632 SNX21Q969T3 373 aa22.52■■□□□ 1.2
GABRB3-209ENST00000555632 COPRSQ9NQ92 184 aa22.52■■□□□ 1.2
GABRB3-209ENST00000555632 NWD2Q9ULI1 1742 aa22.52■■□□□ 1.19
GABRB3-209ENST00000555632 TTC41PQ6P2S7 1318 aa22.51■■□□□ 1.19
GABRB3-209ENST00000555632 TCIRG1Q13488 830 aa22.51■■□□□ 1.19
GABRB3-209ENST00000555632 ISCA1Q9BUE6 129 aa22.51■■□□□ 1.19
GABRB3-209ENST00000555632 NFKBIBQ15653 356 aa22.5■■□□□ 1.19
GABRB3-209ENST00000555632 HLFQ16534 295 aa22.5■■□□□ 1.19
GABRB3-209ENST00000555632 BARGINQ6ZT62 677 aa22.5■■□□□ 1.19
GABRB3-209ENST00000555632 ECHDC1Q9NTX5 307 aa22.5■■□□□ 1.19
GABRB3-209ENST00000555632 CHMP3Q9Y3E7 222 aa22.5■■□□□ 1.19
GABRB3-209ENST00000555632 AK9Q5TCS8 1911 aa22.5■■□□□ 1.19
GABRB3-209ENST00000555632 FAM98CQ17RN3 349 aaKnown RBP22.49■■□□□ 1.19
GABRB3-209ENST00000555632 GLRX3O76003 335 aaKnown RBP22.49■■□□□ 1.19
GABRB3-209ENST00000555632 NGLY1Q96IV0 654 aa22.49■■□□□ 1.19
GABRB3-209ENST00000555632 BCL9LQ86UU0 1499 aa22.48■■□□□ 1.19
GABRB3-209ENST00000555632 EIF5BO60841 1220 aaKnown RBP22.48■■□□□ 1.19
GABRB3-209ENST00000555632 KIF6Q6ZMV9 814 aa22.48■■□□□ 1.19
GABRB3-209ENST00000555632 TFCP2Q12800 502 aa22.48■■□□□ 1.19
GABRB3-209ENST00000555632 MAP3K15Q6ZN16 1313 aa22.47■■□□□ 1.19
GABRB3-209ENST00000555632 KCNQ2O43526 872 aa22.47■■□□□ 1.19
GABRB3-209ENST00000555632 CNTROBQ8N137 903 aa22.47■■□□□ 1.19
GABRB3-209ENST00000555632 ANO2Q9NQ90 1003 aa22.47■■□□□ 1.19
GABRB3-209ENST00000555632 FAM89AQ96GI7 184 aa22.46■■□□□ 1.19
GABRB3-209ENST00000555632 SYNE4Q8N205 404 aa22.46■■□□□ 1.19
GABRB3-209ENST00000555632 JCADQ9P266 1359 aa22.45■■□□□ 1.19
GABRB3-209ENST00000555632 GPTP24298 496 aa22.45■■□□□ 1.18
GABRB3-209ENST00000555632 GIGYF2Q6Y7W6 1299 aaKnown RBP22.45■■□□□ 1.18
GABRB3-209ENST00000555632 ZNF594Q96JF6 807 aaPredicted RBP22.45■■□□□ 1.18
GABRB3-209ENST00000555632 TBC1D2BQ9UPU7 963 aa22.45■■□□□ 1.18
GABRB3-209ENST00000555632 FRAT2O75474 233 aaPredicted RBP22.44■■□□□ 1.18
GABRB3-209ENST00000555632 GPATCH3Q96I76 525 aa22.44■■□□□ 1.18
GABRB3-209ENST00000555632 PALD1Q9ULE6 856 aa22.44■■□□□ 1.18
GABRB3-209ENST00000555632 TRIM28Q13263 835 aaKnown RBP22.43■■□□□ 1.18
GABRB3-209ENST00000555632 RABEP1Q15276 862 aa22.43■■□□□ 1.18
GABRB3-209ENST00000555632 DBNLQ9UJU6 430 aaKnown RBP22.43■■□□□ 1.18
GABRB3-209ENST00000555632 TNNI3KQ59H18 835 aa22.43■■□□□ 1.18
GABRB3-209ENST00000555632 CWC27Q6UX04 472 aaKnown RBP22.43■■□□□ 1.18
GABRB3-209ENST00000555632 ATG9AQ7Z3C6 839 aa22.43■■□□□ 1.18
GABRB3-209ENST00000555632 BOLA2Q9H3K6 86 aa22.43■■□□□ 1.18
GABRB3-209ENST00000555632 FPGT-TNNI3KV9GXZ4 949 aa22.43■■□□□ 1.18
GABRB3-209ENST00000555632 ATP6V1AP38606 617 aa22.42■■□□□ 1.18
GABRB3-209ENST00000555632 CCDC85AQ96PX6 553 aaPredicted RBP22.42■■□□□ 1.18
GABRB3-209ENST00000555632 LOC102724428A0A0B4J2F2 783 aa22.42■■□□□ 1.18
GABRB3-209ENST00000555632 K7ELQ4 463 aaPredicted RBP22.42■■□□□ 1.18
GABRB3-209ENST00000555632 SIK1P57059 783 aa22.42■■□□□ 1.18
GABRB3-209ENST00000555632 ITPK1Q13572 414 aa22.42■■□□□ 1.18
GABRB3-209ENST00000555632 VPS72Q15906 364 aa22.42■■□□□ 1.18
GABRB3-209ENST00000555632 INTS5Q6P9B9 1019 aaKnown RBP22.42■■□□□ 1.18
GABRB3-209ENST00000555632 SGSM2O43147 1006 aa22.41■■□□□ 1.18
GABRB3-209ENST00000555632 LRRC24Q50LG9 513 aa22.41■■□□□ 1.18
GABRB3-209ENST00000555632 FOXD4L1Q9NU39 408 aa22.41■■□□□ 1.18
GABRB3-209ENST00000555632 NLRP10Q86W26 655 aa22.4■■□□□ 1.18
GABRB3-209ENST00000555632 DZIP3Q86Y13 1208 aaKnown RBP22.4■■□□□ 1.18
GABRB3-209ENST00000555632 IL6STP40189 918 aaPredicted RBP22.4■■□□□ 1.18
GABRB3-209ENST00000555632 FNBP4Q8N3X1 1017 aaPredicted RBP22.4■■□□□ 1.18
GABRB3-209ENST00000555632 PUS3Q9BZE2 481 aaKnown RBP22.4■■□□□ 1.18
GABRB3-209ENST00000555632 PCCAP05165 728 aaPredicted RBP22.39■■□□□ 1.18
GABRB3-209ENST00000555632 CRKLP46109 303 aaKnown RBP22.39■■□□□ 1.18
GABRB3-209ENST00000555632 PTF1AQ7RTS3 328 aa22.39■■□□□ 1.18
GABRB3-209ENST00000555632 ZBTB38Q8NAP3 1195 aaPredicted RBP22.39■■□□□ 1.18
GABRB3-209ENST00000555632 EDC3Q96F86 508 aaKnown RBP22.39■■□□□ 1.18
GABRB3-209ENST00000555632 DBNDD2Q9BQY9 259 aa22.39■■□□□ 1.18
GABRB3-209ENST00000555632 NDUFB9Q9Y6M9 179 aa22.39■■□□□ 1.18
GABRB3-209ENST00000555632 DDIT3P35638 169 aa22.39■■□□□ 1.17
GABRB3-209ENST00000555632 PALLDQ8WX93 1383 aa22.38■■□□□ 1.17
GABRB3-209ENST00000555632 EVI5LQ96CN4 794 aa22.38■■□□□ 1.17
GABRB3-209ENST00000555632 EP400Q96L91 3159 aa22.38■■□□□ 1.17
GABRB3-209ENST00000555632 EIF5P55010 431 aaKnown RBP22.37■■□□□ 1.17
GABRB3-209ENST00000555632 MYH14Q7Z406 1995 aaKnown RBP22.37■■□□□ 1.17
GABRB3-209ENST00000555632 NUP98P52948 1817 aa22.37■■□□□ 1.17
GABRB3-209ENST00000555632 MYT1Q01538 1121 aa22.37■■□□□ 1.17
GABRB3-209ENST00000555632 CCDC87Q9NVE4 849 aa22.37■■□□□ 1.17
GABRB3-209ENST00000555632 USP21Q9UK80 565 aa22.37■■□□□ 1.17
GABRB3-209ENST00000555632 KCNQ4P56696 695 aa22.36■■□□□ 1.17
GABRB3-209ENST00000555632 LSG1Q9H089 658 aaKnown RBP22.36■■□□□ 1.17
GABRB3-209ENST00000555632 DIAPH3Q9NSV4 1193 aa22.36■■□□□ 1.17
GABRB3-209ENST00000555632 UBN2Q6ZU65 1347 aa22.36■■□□□ 1.17
GABRB3-209ENST00000555632 TIMM10P62072 90 aa22.36■■□□□ 1.17
GABRB3-209ENST00000555632 FAM182BQ5T319 152 aa22.36■■□□□ 1.17
GABRB3-209ENST00000555632 EYA2O00167 538 aa22.35■■□□□ 1.17
GABRB3-209ENST00000555632 FAM227BQ96M60 508 aa22.35■■□□□ 1.17
GABRB3-209ENST00000555632 CHMP5Q9NZZ3 219 aa22.34■■□□□ 1.17
GABRB3-209ENST00000555632 ERVV-1B6SEH8 477 aa22.34■■□□□ 1.17
GABRB3-209ENST00000555632 CSF1RP07333 972 aa22.34■■□□□ 1.17
GABRB3-209ENST00000555632 CCDC57Q2TAC2 916 aa22.34■■□□□ 1.17
GABRB3-209ENST00000555632 ANKRD36CQ5JPF3 1778 aa22.34■■□□□ 1.17
GABRB3-209ENST00000555632 RAD50Q92878 1312 aa22.34■■□□□ 1.17
GABRB3-209ENST00000555632 PLA2G12BQ9BX93 195 aa22.34■■□□□ 1.17
GABRB3-209ENST00000555632 HSPA4P34932 840 aa22.33■■□□□ 1.17
GABRB3-209ENST00000555632 IL15P40933 162 aaPredicted RBP22.33■■□□□ 1.17
GABRB3-209ENST00000555632 HSP90AB3PQ58FF7 597 aa22.33■■□□□ 1.17
GABRB3-209ENST00000555632 CERKQ8TCT0 537 aa22.33■■□□□ 1.17
GABRB3-209ENST00000555632 HSP90AA1P07900 732 aaKnown RBP22.33■■□□□ 1.16
GABRB3-209ENST00000555632 ATP5JP18859 108 aa22.33■■□□□ 1.16
GABRB3-209ENST00000555632 MCCP23508 829 aa22.33■■□□□ 1.16
GABRB3-209ENST00000555632 NEK4P51957 841 aa22.33■■□□□ 1.16
GABRB3-209ENST00000555632 PTH1RQ03431 593 aa22.33■■□□□ 1.16
GABRB3-209ENST00000555632 NEUROD6Q96NK8 337 aa22.33■■□□□ 1.16
GABRB3-209ENST00000555632 TRMT112Q9UI30 125 aaKnown RBP22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms