RNA–Protein interactions for RNA: ENST00000555627.1

SIX1-204, Transcript of SIX homeobox 1, humanhuman

TSL 5

Gene SIX1, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-204ENST00000555627 TEX13AQ9BXU3 409 aaPredicted RBP12.06□□□□□ -0.48
SIX1-204ENST00000555627 STK32BQ9NY57 414 aa12.06□□□□□ -0.48
SIX1-204ENST00000555627 CNTNAP4Q9C0A0 1308 aa12.06□□□□□ -0.48
SIX1-204ENST00000555627 ARAP2Q8WZ64 1704 aa12.06□□□□□ -0.48
SIX1-204ENST00000555627 DDX58O95786 925 aaKnown RBP12.05□□□□□ -0.48
SIX1-204ENST00000555627 INTS5Q6P9B9 1019 aaKnown RBP12.05□□□□□ -0.48
SIX1-204ENST00000555627 NLGN2Q8NFZ4 835 aa12.05□□□□□ -0.48
SIX1-204ENST00000555627 LINS1Q8NG48 757 aa12.05□□□□□ -0.48
SIX1-204ENST00000555627 PLBD2Q8NHP8 589 aa12.05□□□□□ -0.48
SIX1-204ENST00000555627 CHMP4BQ9H444 224 aaKnown RBP12.05□□□□□ -0.48
SIX1-204ENST00000555627 COL4A1P02462 1669 aa12.04□□□□□ -0.48
SIX1-204ENST00000555627 NBPF7P0C2Y1 421 aaPredicted RBP12.04□□□□□ -0.48
SIX1-204ENST00000555627 CRKLP46109 303 aaKnown RBP12.04□□□□□ -0.48
SIX1-204ENST00000555627 SLC15A2Q16348 729 aa12.04□□□□□ -0.48
SIX1-204ENST00000555627 MYD88Q99836 296 aa12.04□□□□□ -0.48
SIX1-204ENST00000555627 LRRFIP2Q9Y608 721 aaKnown RBP12.04□□□□□ -0.48
SIX1-204ENST00000555627 STARD3NLO95772 234 aa12.03□□□□□ -0.48
SIX1-204ENST00000555627 GNAI3P08754 354 aa12.03□□□□□ -0.48
SIX1-204ENST00000555627 CASP7P55210 303 aa12.03□□□□□ -0.48
SIX1-204ENST00000555627 ANKRD13DQ6ZTN6 518 aa12.03□□□□□ -0.48
SIX1-204ENST00000555627 RIC3Q7Z5B4 369 aa12.03□□□□□ -0.48
SIX1-204ENST00000555627 PROM2Q8N271 834 aa12.03□□□□□ -0.48
SIX1-204ENST00000555627 KAZALD1Q96I82 304 aa12.03□□□□□ -0.48
SIX1-204ENST00000555627 CCDC87Q9NVE4 849 aa12.03□□□□□ -0.48
SIX1-204ENST00000555627 MAP3K15Q6ZN16 1313 aa12.03□□□□□ -0.48
SIX1-204ENST00000555627 NRXN2Q9P2S2 1712 aa12.03□□□□□ -0.48
SIX1-204ENST00000555627 PNMA6EA0A0J9YXQ4 647 aa12.02□□□□□ -0.49
SIX1-204ENST00000555627 GNAI2P04899 355 aa12.02□□□□□ -0.49
SIX1-204ENST00000555627 ATP6V1AP38606 617 aa12.02□□□□□ -0.49
SIX1-204ENST00000555627 IL6STP40189 918 aaPredicted RBP12.02□□□□□ -0.49
SIX1-204ENST00000555627 EIF5P55010 431 aaKnown RBP12.02□□□□□ -0.49
SIX1-204ENST00000555627 RWDD1Q9H446 243 aaPredicted RBP12.02□□□□□ -0.49
SIX1-204ENST00000555627 ZBTB3Q9H5J0 574 aa12.02□□□□□ -0.49
SIX1-204ENST00000555627 PDZRN3Q9UPQ7 1066 aa12.02□□□□□ -0.49
SIX1-204ENST00000555627 TAF1P21675 1872 aa12.02□□□□□ -0.49
SIX1-204ENST00000555627 ANKRD31Q8N7Z5 1873 aa12.02□□□□□ -0.49
SIX1-204ENST00000555627 GRM8O00222 908 aa12.01□□□□□ -0.49
SIX1-204ENST00000555627 UBTFL1P0CB47 393 aaPredicted RBP12.01□□□□□ -0.49
SIX1-204ENST00000555627 HSPA1AP0DMV8 641 aaKnown RBP12.01□□□□□ -0.49
SIX1-204ENST00000555627 HSPA1BP0DMV9 641 aaKnown RBP12.01□□□□□ -0.49
SIX1-204ENST00000555627 PDE4AP27815 886 aa12.01□□□□□ -0.49
SIX1-204ENST00000555627 KCNQ4P56696 695 aa12.01□□□□□ -0.49
SIX1-204ENST00000555627 MTX1Q13505 466 aa12.01□□□□□ -0.49
SIX1-204ENST00000555627 GCKRQ14397 625 aa12.01□□□□□ -0.49
SIX1-204ENST00000555627 AMIGO3Q86WK7 504 aa12.01□□□□□ -0.49
SIX1-204ENST00000555627 SUCLG2Q96I99 432 aa12.01□□□□□ -0.49
SIX1-204ENST00000555627 ISCA1Q9BUE6 129 aa12.01□□□□□ -0.49
SIX1-204ENST00000555627 TOMM70O94826 608 aa12□□□□□ -0.49
SIX1-204ENST00000555627 POLA2Q14181 598 aa12□□□□□ -0.49
SIX1-204ENST00000555627 RPAP2Q8IXW5 612 aaPredicted RBP12□□□□□ -0.49
SIX1-204ENST00000555627 UBN2Q6ZU65 1347 aa12□□□□□ -0.49
SIX1-204ENST00000555627 ATP5J2-PTCD1G3V325 749 aa11.99□□□□□ -0.49
SIX1-204ENST00000555627 CAMTA2O94983 1202 aa11.99□□□□□ -0.49
SIX1-204ENST00000555627 NUCB1Q02818 461 aa11.99□□□□□ -0.49
SIX1-204ENST00000555627 HLFQ16534 295 aa11.99□□□□□ -0.49
SIX1-204ENST00000555627 EPHA10Q5JZY3 1008 aa11.99□□□□□ -0.49
SIX1-204ENST00000555627 GIGYF2Q6Y7W6 1299 aaKnown RBP11.99□□□□□ -0.49
SIX1-204ENST00000555627 SSH3Q8TE77 659 aa11.99□□□□□ -0.49
SIX1-204ENST00000555627 DCTPP1Q9H773 170 aa11.99□□□□□ -0.49
SIX1-204ENST00000555627 COL11A2P13942 1736 aaPredicted RBP11.98□□□□□ -0.49
SIX1-204ENST00000555627 ATP8B2P98198 1209 aa11.98□□□□□ -0.49
SIX1-204ENST00000555627 NEXNQ0ZGT2 675 aa11.98□□□□□ -0.49
SIX1-204ENST00000555627 KIF6Q6ZMV9 814 aa11.98□□□□□ -0.49
SIX1-204ENST00000555627 GCC1Q96CN9 775 aa11.98□□□□□ -0.49
SIX1-204ENST00000555627 LRRC4BQ9NT99 713 aa11.98□□□□□ -0.49
SIX1-204ENST00000555627 CCNL1Q9UK58 526 aaPredicted RBP11.98□□□□□ -0.49
SIX1-204ENST00000555627 TCIRG1Q13488 830 aa11.97□□□□□ -0.49
SIX1-204ENST00000555627 RABL6Q3YEC7 729 aaPredicted RBP11.97□□□□□ -0.49
SIX1-204ENST00000555627 DZIP3Q86Y13 1208 aaKnown RBP11.97□□□□□ -0.49
SIX1-204ENST00000555627 BICC1Q9H694 974 aaKnown RBP11.97□□□□□ -0.49
SIX1-204ENST00000555627 ZNF330Q9Y3S2 320 aaPredicted RBP11.97□□□□□ -0.49
SIX1-204ENST00000555627 SALL3Q9BXA9 1300 aa11.96□□□□□ -0.49
SIX1-204ENST00000555627 ERVV-1B6SEH8 477 aa11.96□□□□□ -0.49
SIX1-204ENST00000555627 H7C1W4 665 aa11.96□□□□□ -0.49
SIX1-204ENST00000555627 TRIM28Q13263 835 aaKnown RBP11.96□□□□□ -0.49
SIX1-204ENST00000555627 RC3H1Q5TC82 1133 aaKnown RBP11.96□□□□□ -0.49
SIX1-204ENST00000555627 UBE3BQ7Z3V4 1068 aa11.96□□□□□ -0.49
SIX1-204ENST00000555627 PPP1R42Q7Z4L9 355 aa11.96□□□□□ -0.49
SIX1-204ENST00000555627 CCDC191Q8NCU4 936 aa11.96□□□□□ -0.49
SIX1-204ENST00000555627 CWC25Q9NXE8 425 aaPredicted RBP11.96□□□□□ -0.49
SIX1-204ENST00000555627 LRRC37AA6NMS7 1700 aa11.96□□□□□ -0.49
SIX1-204ENST00000555627 MYH7P12883 1935 aa11.96□□□□□ -0.5
SIX1-204ENST00000555627 CACNA1SQ13698 1873 aa11.95□□□□□ -0.5
SIX1-204ENST00000555627 RGS3P49796 1198 aa11.95□□□□□ -0.5
SIX1-204ENST00000555627 TXNRD1Q16881 649 aa11.95□□□□□ -0.5
SIX1-204ENST00000555627 SMIM5Q71RC9 77 aa11.95□□□□□ -0.5
SIX1-204ENST00000555627 NLRP10Q86W26 655 aa11.95□□□□□ -0.5
SIX1-204ENST00000555627 ZNF34Q8IZ26 560 aa11.95□□□□□ -0.5
SIX1-204ENST00000555627 JARID2Q92833 1246 aaPredicted RBP11.95□□□□□ -0.5
SIX1-204ENST00000555627 BCL2L12Q9HB09 334 aa11.95□□□□□ -0.5
SIX1-204ENST00000555627 TSHZ2Q9NRE2 1034 aa11.95□□□□□ -0.5
SIX1-204ENST00000555627 C9orf78Q9NZ63 289 aaPredicted RBP11.95□□□□□ -0.5
SIX1-204ENST00000555627 TBC1D2BQ9UPU7 963 aa11.95□□□□□ -0.5
SIX1-204ENST00000555627 RIC1Q4ADV7 1423 aa11.94□□□□□ -0.5
SIX1-204ENST00000555627 CDHR2Q9BYE9 1310 aa11.94□□□□□ -0.5
SIX1-204ENST00000555627 A0A087WZG4 1122 aa11.94□□□□□ -0.5
SIX1-204ENST00000555627 HMMRO75330 724 aa11.94□□□□□ -0.5
SIX1-204ENST00000555627 POLD1P28340 1107 aa11.94□□□□□ -0.5
SIX1-204ENST00000555627 RFX5P48382 616 aaPredicted RBP11.94□□□□□ -0.5
SIX1-204ENST00000555627 FOXO4P98177 505 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms