RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 PTMAP06454 111 aaKnown RBP19.32■□□□□ 0.68
TUBB3-209ENST00000555609 NEXNQ0ZGT2 675 aa19.32■□□□□ 0.68
TUBB3-209ENST00000555609 RBM8AQ9Y5S9 174 aaKnown RBP19.32■□□□□ 0.68
TUBB3-209ENST00000555609 COL15A1P39059 1388 aa19.31■□□□□ 0.68
TUBB3-209ENST00000555609 RFX7Q2KHR2 1363 aa19.31■□□□□ 0.68
TUBB3-209ENST00000555609 ABCC6O95255 1503 aa19.31■□□□□ 0.68
TUBB3-209ENST00000555609 SASH1O94885 1247 aa19.31■□□□□ 0.68
TUBB3-209ENST00000555609 PROSER3Q2NL68 480 aa19.31■□□□□ 0.68
TUBB3-209ENST00000555609 CCDC83Q8IWF9 413 aa19.31■□□□□ 0.68
TUBB3-209ENST00000555609 PA2G4Q9UQ80 394 aaKnown RBP19.31■□□□□ 0.68
TUBB3-209ENST00000555609 JCADQ9P266 1359 aa19.31■□□□□ 0.68
TUBB3-209ENST00000555609 CWF19L2Q2TBE0 894 aaKnown RBP19.31■□□□□ 0.68
TUBB3-209ENST00000555609 KAZALD1Q96I82 304 aa19.31■□□□□ 0.68
TUBB3-209ENST00000555609 MAP7D2Q96T17 732 aa19.31■□□□□ 0.68
TUBB3-209ENST00000555609 PDCL3Q9H2J4 239 aa19.31■□□□□ 0.68
TUBB3-209ENST00000555609 ZBTB7CA1YPR0 619 aa19.3■□□□□ 0.68
TUBB3-209ENST00000555609 KIAA2012Q0VF49 1180 aa19.3■□□□□ 0.68
TUBB3-209ENST00000555609 PDIA6Q15084 440 aa19.3■□□□□ 0.68
TUBB3-209ENST00000555609 ADCK5Q3MIX3 580 aa19.3■□□□□ 0.68
TUBB3-209ENST00000555609 TICAM2Q86XR7 235 aa19.3■□□□□ 0.68
TUBB3-209ENST00000555609 EAF2Q96CJ1 260 aaPredicted RBP19.3■□□□□ 0.68
TUBB3-209ENST00000555609 BICC1Q9H694 974 aaKnown RBP19.3■□□□□ 0.68
TUBB3-209ENST00000555609 ELP1O95163 1332 aa19.3■□□□□ 0.68
TUBB3-209ENST00000555609 SLC27A2O14975 620 aa19.29■□□□□ 0.68
TUBB3-209ENST00000555609 KCNJ4P48050 445 aa19.29■□□□□ 0.68
TUBB3-209ENST00000555609 NMIQ13287 307 aaPredicted RBP19.29■□□□□ 0.68
TUBB3-209ENST00000555609 CERKQ8TCT0 537 aa19.29■□□□□ 0.68
TUBB3-209ENST00000555609 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.29■□□□□ 0.68
TUBB3-209ENST00000555609 LARGE1O95461 756 aa19.28■□□□□ 0.68
TUBB3-209ENST00000555609 TPM3P06753 285 aa19.28■□□□□ 0.68
TUBB3-209ENST00000555609 KRT32Q14532 448 aa19.28■□□□□ 0.68
TUBB3-209ENST00000555609 ME3Q16798 604 aa19.28■□□□□ 0.68
TUBB3-209ENST00000555609 FOXD4L6Q3SYB3 417 aaPredicted RBP19.28■□□□□ 0.68
TUBB3-209ENST00000555609 FOXD4L3Q6VB84 417 aaPredicted RBP19.28■□□□□ 0.68
TUBB3-209ENST00000555609 RIC3Q7Z5B4 369 aa19.28■□□□□ 0.68
TUBB3-209ENST00000555609 FUCA2Q9BTY2 467 aa19.28■□□□□ 0.68
TUBB3-209ENST00000555609 MED23Q9ULK4 1368 aa19.28■□□□□ 0.68
TUBB3-209ENST00000555609 KRT85P78386 507 aa19.27■□□□□ 0.68
TUBB3-209ENST00000555609 XPCQ01831 940 aaPredicted RBP19.27■□□□□ 0.68
TUBB3-209ENST00000555609 ZNF790Q6PG37 636 aa19.27■□□□□ 0.68
TUBB3-209ENST00000555609 BLOC1S2Q6QNY1 142 aa19.27■□□□□ 0.68
TUBB3-209ENST00000555609 SASS6Q6UVJ0 657 aa19.27■□□□□ 0.68
TUBB3-209ENST00000555609 METTL22Q9BUU2 404 aaPredicted RBP19.27■□□□□ 0.68
TUBB3-209ENST00000555609 COPRSQ9NQ92 184 aa19.27■□□□□ 0.68
TUBB3-209ENST00000555609 R3HCC1Q9Y3T6 440 aaKnown RBP19.27■□□□□ 0.68
TUBB3-209ENST00000555609 KIF1AQ12756 1690 aa19.27■□□□□ 0.67
TUBB3-209ENST00000555609 TRPM3Q9HCF6 1732 aaPredicted RBP19.27■□□□□ 0.67
TUBB3-209ENST00000555609 NEURL1BA8MQ27 555 aa19.26■□□□□ 0.67
TUBB3-209ENST00000555609 FIBPO43427 364 aa19.26■□□□□ 0.67
TUBB3-209ENST00000555609 KDM4AO75164 1064 aa19.26■□□□□ 0.67
TUBB3-209ENST00000555609 PROSER2Q86WR7 435 aaPredicted RBP19.26■□□□□ 0.67
TUBB3-209ENST00000555609 XIRP1Q702N8 1843 aaKnown RBP19.26■□□□□ 0.67
TUBB3-209ENST00000555609 IGKV5-2P06315 115 aa19.26■□□□□ 0.67
TUBB3-209ENST00000555609 CPA1P15085 419 aa19.26■□□□□ 0.67
TUBB3-209ENST00000555609 RPS6KB1P23443 525 aa19.26■□□□□ 0.67
TUBB3-209ENST00000555609 GCKRQ14397 625 aa19.26■□□□□ 0.67
TUBB3-209ENST00000555609 LARP1BQ659C4 914 aaKnown RBP19.26■□□□□ 0.67
TUBB3-209ENST00000555609 MTERF4Q7Z6M4 381 aaKnown RBP19.26■□□□□ 0.67
TUBB3-209ENST00000555609 FSD1Q9BTV5 496 aa19.26■□□□□ 0.67
TUBB3-209ENST00000555609 SLC52A2Q9HAB3 445 aa19.26■□□□□ 0.67
TUBB3-209ENST00000555609 TPCN1Q9ULQ1 816 aa19.26■□□□□ 0.67
TUBB3-209ENST00000555609 TCHHQ07283 1943 aa19.25■□□□□ 0.67
TUBB3-209ENST00000555609 DYNC1I1O14576 645 aa19.25■□□□□ 0.67
TUBB3-209ENST00000555609 ATP5JP18859 108 aa19.25■□□□□ 0.67
TUBB3-209ENST00000555609 DNM1Q05193 864 aaKnown RBP19.25■□□□□ 0.67
TUBB3-209ENST00000555609 USPL1Q5W0Q7 1092 aa19.25■□□□□ 0.67
TUBB3-209ENST00000555609 FAM227BQ96M60 508 aa19.25■□□□□ 0.67
TUBB3-209ENST00000555609 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.25■□□□□ 0.67
TUBB3-209ENST00000555609 TMEM94Q12767 1356 aa19.25■□□□□ 0.67
TUBB3-209ENST00000555609 ST3GAL1Q11201 340 aa19.24■□□□□ 0.67
TUBB3-209ENST00000555609 SCAND2PQ9GZW5 306 aaPredicted RBP19.24■□□□□ 0.67
TUBB3-209ENST00000555609 CCDC8Q9H0W5 538 aaPredicted RBP19.24■□□□□ 0.67
TUBB3-209ENST00000555609 ERBB3P21860 1342 aa19.24■□□□□ 0.67
TUBB3-209ENST00000555609 ADCY5O95622 1261 aa19.24■□□□□ 0.67
TUBB3-209ENST00000555609 CCDC192P0DO97 292 aa19.24■□□□□ 0.67
TUBB3-209ENST00000555609 KRT28Q7Z3Y7 464 aa19.24■□□□□ 0.67
TUBB3-209ENST00000555609 RAPGEF4Q8WZA2 1011 aa19.24■□□□□ 0.67
TUBB3-209ENST00000555609 PIBF1Q8WXW3 757 aa19.23■□□□□ 0.67
TUBB3-209ENST00000555609 LARP6Q9BRS8 491 aaKnown RBP19.23■□□□□ 0.67
TUBB3-209ENST00000555609 NPHP3Q7Z494 1330 aa19.22■□□□□ 0.67
TUBB3-209ENST00000555609 PRAMEF22A3QJZ6 481 aa19.22■□□□□ 0.67
TUBB3-209ENST00000555609 VPS37CA5D8V6 355 aaPredicted RBP19.22■□□□□ 0.67
TUBB3-209ENST00000555609 HCLS1P14317 486 aaPredicted RBP19.22■□□□□ 0.67
TUBB3-209ENST00000555609 ORAI2Q96SN7 254 aa19.22■□□□□ 0.67
TUBB3-209ENST00000555609 BOLA2Q9H3K6 86 aa19.22■□□□□ 0.67
TUBB3-209ENST00000555609 USP25Q9UHP3 1055 aa19.22■□□□□ 0.67
TUBB3-209ENST00000555609 A0A0D9SFI3 127 aa19.22■□□□□ 0.67
TUBB3-209ENST00000555609 TATP17735 454 aaPredicted RBP19.22■□□□□ 0.67
TUBB3-209ENST00000555609 AIMP1Q12904 312 aaKnown RBP19.22■□□□□ 0.67
TUBB3-209ENST00000555609 RABL6Q3YEC7 729 aaPredicted RBP19.22■□□□□ 0.67
TUBB3-209ENST00000555609 AXIN2Q9Y2T1 843 aa19.22■□□□□ 0.67
TUBB3-209ENST00000555609 SCN11AQ9UI33 1791 aa19.22■□□□□ 0.67
TUBB3-209ENST00000555609 TAF5LO75529 589 aa19.21■□□□□ 0.67
TUBB3-209ENST00000555609 SNRPA1P09661 255 aaKnown RBP19.21■□□□□ 0.67
TUBB3-209ENST00000555609 U3KPZ7 1027 aaPredicted RBP19.21■□□□□ 0.67
TUBB3-209ENST00000555609 PHKG2P15735 406 aa19.2■□□□□ 0.66
TUBB3-209ENST00000555609 ANKRD13DQ6ZTN6 518 aa19.2■□□□□ 0.66
TUBB3-209ENST00000555609 XAGE3Q8WTP9 111 aa19.2■□□□□ 0.66
TUBB3-209ENST00000555609 PRIMPOLQ96LW4 560 aa19.2■□□□□ 0.66
TUBB3-209ENST00000555609 UQCRHLA0A096LP55 91 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms