RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 CARMIL3Q8ND23 1372 aa13.55□□□□□ -0.24
TMEM260-206ENST00000555046 TJP1Q07157 1748 aa13.54□□□□□ -0.24
TMEM260-206ENST00000555046 DDR1Q08345 913 aa13.54□□□□□ -0.24
TMEM260-206ENST00000555046 HLFQ16534 295 aa13.54□□□□□ -0.24
TMEM260-206ENST00000555046 CNBD1Q8NA66 436 aa13.54□□□□□ -0.24
TMEM260-206ENST00000555046 BRIP1Q9BX63 1249 aa13.54□□□□□ -0.24
TMEM260-206ENST00000555046 MYH14Q7Z406 1995 aaKnown RBP13.54□□□□□ -0.24
TMEM260-206ENST00000555046 COL5A3P25940 1745 aaPredicted RBP13.53□□□□□ -0.24
TMEM260-206ENST00000555046 ARFGEF1Q9Y6D6 1849 aa13.53□□□□□ -0.24
TMEM260-206ENST00000555046 HSP90B1P14625 803 aaKnown RBP13.53□□□□□ -0.24
TMEM260-206ENST00000555046 PDE6BP35913 854 aa13.53□□□□□ -0.24
TMEM260-206ENST00000555046 KSR2Q6VAB6 950 aa13.53□□□□□ -0.24
TMEM260-206ENST00000555046 ZNF34Q8IZ26 560 aa13.53□□□□□ -0.24
TMEM260-206ENST00000555046 CDCA7LQ96GN5 454 aa13.53□□□□□ -0.24
TMEM260-206ENST00000555046 KDM3BQ7LBC6 1761 aa13.53□□□□□ -0.24
TMEM260-206ENST00000555046 VIRMAQ69YN4 1812 aaKnown RBP13.53□□□□□ -0.24
TMEM260-206ENST00000555046 UBR3Q6ZT12 1888 aa13.53□□□□□ -0.24
TMEM260-206ENST00000555046 CTCFP49711 727 aaPredicted RBP13.52□□□□□ -0.25
TMEM260-206ENST00000555046 NEXNQ0ZGT2 675 aa13.52□□□□□ -0.25
TMEM260-206ENST00000555046 TRIM28Q13263 835 aaKnown RBP13.52□□□□□ -0.25
TMEM260-206ENST00000555046 UTP14AQ9BVJ6 771 aaKnown RBP13.52□□□□□ -0.25
TMEM260-206ENST00000555046 ZBED9Q6R2W3 1325 aa13.52□□□□□ -0.25
TMEM260-206ENST00000555046 SBF1O95248 1867 aa13.51□□□□□ -0.25
TMEM260-206ENST00000555046 RNF123Q5XPI4 1314 aa13.51□□□□□ -0.25
TMEM260-206ENST00000555046 H0YIN7 160 aa13.51□□□□□ -0.25
TMEM260-206ENST00000555046 ALDH1L2Q3SY69 923 aa13.51□□□□□ -0.25
TMEM260-206ENST00000555046 PHAXQ9H814 394 aaKnown RBP13.51□□□□□ -0.25
TMEM260-206ENST00000555046 KDM2BQ8NHM5 1336 aa13.5□□□□□ -0.25
TMEM260-206ENST00000555046 CCDC85CA6NKD9 419 aa13.5□□□□□ -0.25
TMEM260-206ENST00000555046 FLIIQ13045 1269 aa13.5□□□□□ -0.25
TMEM260-206ENST00000555046 FKBP5Q13451 457 aaPredicted RBP13.5□□□□□ -0.25
TMEM260-206ENST00000555046 RRAGCQ9HB90 399 aa13.5□□□□□ -0.25
TMEM260-206ENST00000555046 PI4KAP2A4QPH2 592 aa13.49□□□□□ -0.25
TMEM260-206ENST00000555046 TCERG1O14776 1098 aaKnown RBP13.49□□□□□ -0.25
TMEM260-206ENST00000555046 GPTP24298 496 aa13.49□□□□□ -0.25
TMEM260-206ENST00000555046 PRR5LQ6MZQ0 368 aa13.49□□□□□ -0.25
TMEM260-206ENST00000555046 POTEHQ6S545 545 aa13.49□□□□□ -0.25
TMEM260-206ENST00000555046 PI4KAP1Q8N8J0 262 aa13.49□□□□□ -0.25
TMEM260-206ENST00000555046 CCDC191Q8NCU4 936 aa13.49□□□□□ -0.25
TMEM260-206ENST00000555046 METTL22Q9BUU2 404 aaPredicted RBP13.49□□□□□ -0.25
TMEM260-206ENST00000555046 PIM2Q9P1W9 311 aa13.49□□□□□ -0.25
TMEM260-206ENST00000555046 MAP3K2Q9Y2U5 619 aa13.49□□□□□ -0.25
TMEM260-206ENST00000555046 FAM177BA6PVY3 158 aa13.48□□□□□ -0.25
TMEM260-206ENST00000555046 LBX1P52954 281 aa13.48□□□□□ -0.25
TMEM260-206ENST00000555046 SUSD4Q5VX71 490 aa13.48□□□□□ -0.25
TMEM260-206ENST00000555046 C9orf131Q5VYM1 1079 aa13.48□□□□□ -0.25
TMEM260-206ENST00000555046 ISCA1Q9BUE6 129 aa13.48□□□□□ -0.25
TMEM260-206ENST00000555046 MKRN1Q9UHC7 482 aaKnown RBP13.48□□□□□ -0.25
TMEM260-206ENST00000555046 TRMT112Q9UI30 125 aaKnown RBP13.48□□□□□ -0.25
TMEM260-206ENST00000555046 PTPRCP08575 1304 aa13.47□□□□□ -0.25
TMEM260-206ENST00000555046 A0A0G2JLW4 131 aa13.47□□□□□ -0.25
TMEM260-206ENST00000555046 DPEP1P16444 411 aa13.47□□□□□ -0.25
TMEM260-206ENST00000555046 SLC10A5Q5PT55 438 aa13.47□□□□□ -0.25
TMEM260-206ENST00000555046 NLRP10Q86W26 655 aa13.47□□□□□ -0.25
TMEM260-206ENST00000555046 NLRP3Q96P20 1036 aa13.47□□□□□ -0.25
TMEM260-206ENST00000555046 IBTKQ9P2D0 1353 aaPredicted RBP13.46□□□□□ -0.25
TMEM260-206ENST00000555046 SH3TC1Q8TE82 1336 aa13.46□□□□□ -0.25
TMEM260-206ENST00000555046 IPO8O15397 1037 aaKnown RBP13.46□□□□□ -0.25
TMEM260-206ENST00000555046 ALDH1B1P30837 517 aa13.46□□□□□ -0.25
TMEM260-206ENST00000555046 BRPF1P55201 1214 aaPredicted RBP13.46□□□□□ -0.25
TMEM260-206ENST00000555046 C2CD5Q86YS7 1000 aa13.46□□□□□ -0.25
TMEM260-206ENST00000555046 DNAAF4Q8WXU2 420 aa13.46□□□□□ -0.25
TMEM260-206ENST00000555046 CNKSR1Q969H4 720 aa13.46□□□□□ -0.25
TMEM260-206ENST00000555046 AIDAQ96BJ3 306 aa13.46□□□□□ -0.25
TMEM260-206ENST00000555046 MYD88Q99836 296 aa13.46□□□□□ -0.25
TMEM260-206ENST00000555046 SMC4Q9NTJ3 1288 aa13.46□□□□□ -0.25
TMEM260-206ENST00000555046 CWC25Q9NXE8 425 aaPredicted RBP13.46□□□□□ -0.25
TMEM260-206ENST00000555046 KLRG2A4D1S0 409 aaPredicted RBP13.45□□□□□ -0.26
TMEM260-206ENST00000555046 ATP5J2-PTCD1G3V325 749 aa13.45□□□□□ -0.26
TMEM260-206ENST00000555046 DALRD3Q5D0E6 543 aaKnown RBP13.45□□□□□ -0.26
TMEM260-206ENST00000555046 ARHGAP27Q6ZUM4 889 aa13.45□□□□□ -0.26
TMEM260-206ENST00000555046 G2E3Q7L622 706 aa13.45□□□□□ -0.26
TMEM260-206ENST00000555046 MRPL50Q8N5N7 158 aaKnown RBP13.45□□□□□ -0.26
TMEM260-206ENST00000555046 TTLL6Q8N841 843 aa13.45□□□□□ -0.26
TMEM260-206ENST00000555046 ZBTB38Q8NAP3 1195 aaPredicted RBP13.45□□□□□ -0.26
TMEM260-206ENST00000555046 LINS1Q8NG48 757 aa13.45□□□□□ -0.26
TMEM260-206ENST00000555046 SSH1Q8WYL5 1049 aa13.45□□□□□ -0.26
TMEM260-206ENST00000555046 MASTLQ96GX5 879 aa13.45□□□□□ -0.26
TMEM260-206ENST00000555046 UBN2Q6ZU65 1347 aa13.44□□□□□ -0.26
TMEM260-206ENST00000555046 NTSR2O95665 410 aa13.44□□□□□ -0.26
TMEM260-206ENST00000555046 NPR1P16066 1061 aa13.44□□□□□ -0.26
TMEM260-206ENST00000555046 ERFEQ4G0M1 354 aa13.44□□□□□ -0.26
TMEM260-206ENST00000555046 STYK1Q6J9G0 422 aa13.44□□□□□ -0.26
TMEM260-206ENST00000555046 ZNF622Q969S3 477 aaKnown RBP eCLIP13.44□□□□□ -0.26
TMEM260-206ENST00000555046 BCS1LQ9Y276 419 aa13.44□□□□□ -0.26
TMEM260-206ENST00000555046 CNTNAP1P78357 1384 aa13.44□□□□□ -0.26
TMEM260-206ENST00000555046 PCCAP05165 728 aaPredicted RBP13.43□□□□□ -0.26
TMEM260-206ENST00000555046 SRGNP10124 158 aa13.43□□□□□ -0.26
TMEM260-206ENST00000555046 HSPA8P11142 646 aaKnown RBP13.43□□□□□ -0.26
TMEM260-206ENST00000555046 KCNA3P22001 575 aa13.43□□□□□ -0.26
TMEM260-206ENST00000555046 RARSP54136 660 aaKnown RBP13.43□□□□□ -0.26
TMEM260-206ENST00000555046 NUTM1Q86Y26 1132 aa13.43□□□□□ -0.26
TMEM260-206ENST00000555046 ARHGAP45Q92619 1136 aa13.43□□□□□ -0.26
TMEM260-206ENST00000555046 RPGRQ92834 1020 aaKnown RBP13.43□□□□□ -0.26
TMEM260-206ENST00000555046 API5Q9BZZ5 524 aaKnown RBP13.43□□□□□ -0.26
TMEM260-206ENST00000555046 TMX4Q9H1E5 349 aaPredicted RBP13.43□□□□□ -0.26
TMEM260-206ENST00000555046 LAMB4A4D0S4 1761 aa13.43□□□□□ -0.26
TMEM260-206ENST00000555046 ALDH1L1O75891 902 aa13.42□□□□□ -0.26
TMEM260-206ENST00000555046 CHRNA5P30532 468 aa13.42□□□□□ -0.26
TMEM260-206ENST00000555046 SOGA3Q5TF21 947 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 680.6 ms