RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 C2CD2LO14523 706 aa7.53□□□□□ -1.2
SCFD1-214ENST00000554819 SF3B2Q13435 895 aaKnown RBP7.53□□□□□ -1.2
SCFD1-214ENST00000554819 ETFBKMTQ8IXQ9 262 aa7.53□□□□□ -1.2
SCFD1-214ENST00000554819 ZSCAN1Q8NBB4 408 aa7.53□□□□□ -1.2
SCFD1-214ENST00000554819 OXCT2Q9BYC2 517 aaPredicted RBP7.53□□□□□ -1.2
SCFD1-214ENST00000554819 GDF2Q9UK05 429 aaPredicted RBP7.53□□□□□ -1.2
SCFD1-214ENST00000554819 ABL1P00519 1130 aa7.52□□□□□ -1.21
SCFD1-214ENST00000554819 ARAFP10398 606 aa7.52□□□□□ -1.21
SCFD1-214ENST00000554819 PDIA4P13667 645 aaKnown RBP7.52□□□□□ -1.21
SCFD1-214ENST00000554819 FKBP4Q02790 459 aaKnown RBP eCLIP7.52□□□□□ -1.21
SCFD1-214ENST00000554819 GOLGA6L1Q8N7Z2 621 aa7.52□□□□□ -1.21
SCFD1-214ENST00000554819 LRRC4BQ9NT99 713 aa7.52□□□□□ -1.21
SCFD1-214ENST00000554819 EGFL7Q9UHF1 273 aa7.52□□□□□ -1.21
SCFD1-214ENST00000554819 HCN2Q9UL51 889 aa7.52□□□□□ -1.21
SCFD1-214ENST00000554819 DNMT3AQ9Y6K1 912 aaPredicted RBP7.52□□□□□ -1.21
SCFD1-214ENST00000554819 OPLAHO14841 1288 aa7.51□□□□□ -1.21
SCFD1-214ENST00000554819 FAM13AO94988 1023 aa7.51□□□□□ -1.21
SCFD1-214ENST00000554819 SPEM2Q0P670 501 aa7.51□□□□□ -1.21
SCFD1-214ENST00000554819 ZNF468Q5VIY5 522 aaPredicted RBP7.51□□□□□ -1.21
SCFD1-214ENST00000554819 ALKBH2Q6NS38 261 aa7.51□□□□□ -1.21
SCFD1-214ENST00000554819 TXNDC2Q86VQ3 553 aa7.51□□□□□ -1.21
SCFD1-214ENST00000554819 RTCBQ9Y3I0 505 aaKnown RBP7.51□□□□□ -1.21
SCFD1-214ENST00000554819 PATL2C9JE40 543 aaKnown RBP7.5□□□□□ -1.21
SCFD1-214ENST00000554819 BCRP11274 1271 aa7.5□□□□□ -1.21
SCFD1-214ENST00000554819 ADH6P28332 368 aa7.5□□□□□ -1.21
SCFD1-214ENST00000554819 ZAP70P43403 619 aa7.5□□□□□ -1.21
SCFD1-214ENST00000554819 MAP3K10Q02779 954 aa7.5□□□□□ -1.21
SCFD1-214ENST00000554819 CCINQ13939 588 aa7.5□□□□□ -1.21
SCFD1-214ENST00000554819 NOM1Q5C9Z4 860 aaKnown RBP7.5□□□□□ -1.21
SCFD1-214ENST00000554819 PIK3R5Q8WYR1 880 aa7.5□□□□□ -1.21
SCFD1-214ENST00000554819 ACDQ96AP0 544 aa7.5□□□□□ -1.21
SCFD1-214ENST00000554819 PNMA5Q96PV4 448 aa7.5□□□□□ -1.21
SCFD1-214ENST00000554819 ENAMQ9NRM1 1142 aa7.5□□□□□ -1.21
SCFD1-214ENST00000554819 FAM181BA6NEQ2 426 aa7.49□□□□□ -1.21
SCFD1-214ENST00000554819 CELA2BP08218 269 aaPredicted RBP7.49□□□□□ -1.21
SCFD1-214ENST00000554819 NPR3P17342 541 aa7.49□□□□□ -1.21
SCFD1-214ENST00000554819 SYT9Q86SS6 491 aa7.49□□□□□ -1.21
SCFD1-214ENST00000554819 RGL4Q8IZJ4 473 aa7.49□□□□□ -1.21
SCFD1-214ENST00000554819 CMTR1Q8N1G2 835 aaKnown RBP7.49□□□□□ -1.21
SCFD1-214ENST00000554819 SVOPQ8N4V2 548 aa7.49□□□□□ -1.21
SCFD1-214ENST00000554819 SLC30A3Q99726 388 aa7.49□□□□□ -1.21
SCFD1-214ENST00000554819 GSX2Q9BZM3 304 aa7.49□□□□□ -1.21
SCFD1-214ENST00000554819 GGA1Q9UJY5 639 aa7.49□□□□□ -1.21
SCFD1-214ENST00000554819 ZBTB39O15060 712 aa7.48□□□□□ -1.21
SCFD1-214ENST00000554819 RPLP1P05386 114 aaKnown RBP7.48□□□□□ -1.21
SCFD1-214ENST00000554819 MPSTP25325 297 aa7.48□□□□□ -1.21
SCFD1-214ENST00000554819 SERPINB4P48594 390 aa7.48□□□□□ -1.21
SCFD1-214ENST00000554819 KCNA1Q09470 495 aa7.48□□□□□ -1.21
SCFD1-214ENST00000554819 AAMPQ13685 434 aa7.48□□□□□ -1.21
SCFD1-214ENST00000554819 FAM26DQ5JW98 314 aa7.48□□□□□ -1.21
SCFD1-214ENST00000554819 ZNF385CQ66K41 422 aaPredicted RBP7.48□□□□□ -1.21
SCFD1-214ENST00000554819 LYPD4Q6UWN0 246 aa7.48□□□□□ -1.21
SCFD1-214ENST00000554819 GNEQ9Y223 722 aaKnown RBP7.48□□□□□ -1.21
SCFD1-214ENST00000554819 FNDC3AQ9Y2H6 1198 aaKnown RBP7.48□□□□□ -1.21
SCFD1-214ENST00000554819 NEURL1BA8MQ27 555 aa7.47□□□□□ -1.21
SCFD1-214ENST00000554819 OIP5O43482 229 aa7.47□□□□□ -1.21
SCFD1-214ENST00000554819 ICMTO60725 284 aa7.47□□□□□ -1.21
SCFD1-214ENST00000554819 SIN3BO75182 1162 aa7.47□□□□□ -1.21
SCFD1-214ENST00000554819 EGFRP00533 1210 aa7.47□□□□□ -1.21
SCFD1-214ENST00000554819 PCSK2P16519 638 aa7.47□□□□□ -1.21
SCFD1-214ENST00000554819 LORP23490 312 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-214ENST00000554819 EIF1AXP47813 144 aaKnown RBP7.47□□□□□ -1.21
SCFD1-214ENST00000554819 PCBP4P57723 403 aaKnown RBP7.47□□□□□ -1.21
SCFD1-214ENST00000554819 ZNF211Q13398 564 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-214ENST00000554819 MTMR3Q13615 1198 aa7.47□□□□□ -1.21
SCFD1-214ENST00000554819 GRIN2CQ14957 1233 aa7.47□□□□□ -1.21
SCFD1-214ENST00000554819 SLCO4C1Q6ZQN7 724 aa7.47□□□□□ -1.21
SCFD1-214ENST00000554819 GALNT6Q8NCL4 622 aa7.47□□□□□ -1.21
SCFD1-214ENST00000554819 WHAMMQ8TF30 809 aa7.47□□□□□ -1.21
SCFD1-214ENST00000554819 BHMTQ93088 406 aa7.47□□□□□ -1.21
SCFD1-214ENST00000554819 ANO2Q9NQ90 1003 aa7.47□□□□□ -1.21
SCFD1-214ENST00000554819 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.47□□□□□ -1.21
SCFD1-214ENST00000554819 XYLBO75191 536 aa7.46□□□□□ -1.22
SCFD1-214ENST00000554819 GRNP28799 593 aaKnown RBP7.46□□□□□ -1.22
SCFD1-214ENST00000554819 GLYCTKQ8IVS8 523 aa7.46□□□□□ -1.22
SCFD1-214ENST00000554819 TTC16Q8NEE8 873 aa7.46□□□□□ -1.22
SCFD1-214ENST00000554819 GPR152Q8TDT2 470 aa7.46□□□□□ -1.22
SCFD1-214ENST00000554819 EDARADDQ8WWZ3 215 aa7.46□□□□□ -1.22
SCFD1-214ENST00000554819 USP20Q9Y2K6 914 aa7.46□□□□□ -1.22
SCFD1-214ENST00000554819 H3BRB1 525 aa7.45□□□□□ -1.22
SCFD1-214ENST00000554819 ALAS2P22557 587 aa7.45□□□□□ -1.22
SCFD1-214ENST00000554819 RAB44Q7Z6P3 723 aaPredicted RBP7.45□□□□□ -1.22
SCFD1-214ENST00000554819 KCTD17Q8N5Z5 321 aa7.45□□□□□ -1.22
SCFD1-214ENST00000554819 TNFRSF25Q93038 417 aa7.45□□□□□ -1.22
SCFD1-214ENST00000554819 TUT1Q9H6E5 874 aaKnown RBP7.45□□□□□ -1.22
SCFD1-214ENST00000554819 STK17AQ9UEE5 414 aa7.45□□□□□ -1.22
SCFD1-214ENST00000554819 KLF15Q9UIH9 416 aa7.45□□□□□ -1.22
SCFD1-214ENST00000554819 KCNMB2Q9Y691 235 aa7.45□□□□□ -1.22
SCFD1-214ENST00000554819 UBAP1LF5GYI3 381 aa7.44□□□□□ -1.22
SCFD1-214ENST00000554819 SASH3O75995 380 aa7.44□□□□□ -1.22
SCFD1-214ENST00000554819 RARAP10276 462 aa7.44□□□□□ -1.22
SCFD1-214ENST00000554819 EPXP11678 715 aa7.44□□□□□ -1.22
SCFD1-214ENST00000554819 NFKB1P19838 968 aa7.44□□□□□ -1.22
SCFD1-214ENST00000554819 MZF1P28698 734 aaPredicted RBP7.44□□□□□ -1.22
SCFD1-214ENST00000554819 USP5P45974 858 aa7.44□□□□□ -1.22
SCFD1-214ENST00000554819 DNM1Q05193 864 aaKnown RBP7.44□□□□□ -1.22
SCFD1-214ENST00000554819 PCSK7Q16549 785 aa7.44□□□□□ -1.22
SCFD1-214ENST00000554819 ATCAYQ86WG3 371 aa7.44□□□□□ -1.22
SCFD1-214ENST00000554819 NEDD1Q8NHV4 660 aa7.44□□□□□ -1.22
SCFD1-214ENST00000554819 EDEM1Q92611 657 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms