RNA–Protein interactions for RNA: ENST00000554691.5

PCNX1-207, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,204 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-207ENST00000554691 IFFO1Q0D2I5 559 aa7.37□□□□□ -1.23
PCNX1-207ENST00000554691 MUM1L1Q5H9M0 696 aa7.37□□□□□ -1.23
PCNX1-207ENST00000554691 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.37□□□□□ -1.23
PCNX1-207ENST00000554691 MRVI1Q9Y6F6 885 aa7.37□□□□□ -1.23
PCNX1-207ENST00000554691 U3KPZ7 1027 aaPredicted RBP7.37□□□□□ -1.23
PCNX1-207ENST00000554691 MYO1CO00159 1063 aa7.37□□□□□ -1.23
PCNX1-207ENST00000554691 HNRNPH2P55795 449 aaKnown RBP7.37□□□□□ -1.23
PCNX1-207ENST00000554691 NAA25Q14CX7 972 aa7.37□□□□□ -1.23
PCNX1-207ENST00000554691 VPS53Q5VIR6 699 aa7.37□□□□□ -1.23
PCNX1-207ENST00000554691 TRIM22Q8IYM9 498 aa7.37□□□□□ -1.23
PCNX1-207ENST00000554691 ZGPATQ8N5A5 531 aaKnown RBP7.37□□□□□ -1.23
PCNX1-207ENST00000554691 ANKRD7Q92527 254 aa7.37□□□□□ -1.23
PCNX1-207ENST00000554691 RBM42Q9BTD8 480 aaKnown RBP7.37□□□□□ -1.23
PCNX1-207ENST00000554691 SWAP70Q9UH65 585 aa7.37□□□□□ -1.23
PCNX1-207ENST00000554691 PTPRKQ15262 1439 aa7.37□□□□□ -1.23
PCNX1-207ENST00000554691 PRAG1Q86YV5 1406 aa7.37□□□□□ -1.23
PCNX1-207ENST00000554691 NFXL1Q6ZNB6 911 aa7.37□□□□□ -1.23
PCNX1-207ENST00000554691 CEP57Q86XR8 500 aa7.37□□□□□ -1.23
PCNX1-207ENST00000554691 WDR66Q8TBY9 1149 aa7.37□□□□□ -1.23
PCNX1-207ENST00000554691 DISP3Q9P2K9 1392 aa7.37□□□□□ -1.23
PCNX1-207ENST00000554691 SNAPC4Q5SXM2 1469 aa7.36□□□□□ -1.23
PCNX1-207ENST00000554691 CCDC151A5D8V7 595 aa7.36□□□□□ -1.23
PCNX1-207ENST00000554691 GTF2E1P29083 439 aaPredicted RBP7.36□□□□□ -1.23
PCNX1-207ENST00000554691 PDE1AP54750 535 aa7.36□□□□□ -1.23
PCNX1-207ENST00000554691 CHMP4BP1P59074 171 aa7.36□□□□□ -1.23
PCNX1-207ENST00000554691 UTP14AQ9BVJ6 771 aaKnown RBP7.36□□□□□ -1.23
PCNX1-207ENST00000554691 STMN4Q9H169 189 aaPredicted RBP7.36□□□□□ -1.23
PCNX1-207ENST00000554691 SENP3Q9H4L4 574 aaPredicted RBP7.36□□□□□ -1.23
PCNX1-207ENST00000554691 TTF2Q9UNY4 1162 aaKnown RBP7.36□□□□□ -1.23
PCNX1-207ENST00000554691 CEP83Q9Y592 693 aa7.36□□□□□ -1.23
PCNX1-207ENST00000554691 USP19O94966 1318 aa7.36□□□□□ -1.23
PCNX1-207ENST00000554691 TTC41PQ6P2S7 1318 aa7.36□□□□□ -1.23
PCNX1-207ENST00000554691 PHLPP2Q6ZVD8 1323 aa7.36□□□□□ -1.23
PCNX1-207ENST00000554691 SLC4A2P04920 1241 aa7.36□□□□□ -1.23
PCNX1-207ENST00000554691 AMPHP49418 695 aa7.36□□□□□ -1.23
PCNX1-207ENST00000554691 CROCCP2Q86T23 111 aa7.36□□□□□ -1.23
PCNX1-207ENST00000554691 PLEKHM2Q8IWE5 1019 aa7.36□□□□□ -1.23
PCNX1-207ENST00000554691 ANKRD24Q8TF21 1146 aa7.36□□□□□ -1.23
PCNX1-207ENST00000554691 CBX8Q9HC52 389 aa7.36□□□□□ -1.23
PCNX1-207ENST00000554691 FAM177BA6PVY3 158 aa7.36□□□□□ -1.23
PCNX1-207ENST00000554691 NDUFAB1O14561 156 aa7.36□□□□□ -1.23
PCNX1-207ENST00000554691 KIF3CO14782 793 aa7.36□□□□□ -1.23
PCNX1-207ENST00000554691 CYLC1P35663 651 aaPredicted RBP7.36□□□□□ -1.23
PCNX1-207ENST00000554691 KRT83P78385 493 aa7.36□□□□□ -1.23
PCNX1-207ENST00000554691 DNM1Q05193 864 aaKnown RBP7.36□□□□□ -1.23
PCNX1-207ENST00000554691 NCBP1Q09161 790 aaKnown RBP7.36□□□□□ -1.23
PCNX1-207ENST00000554691 CCDC102BQ68D86 513 aa7.36□□□□□ -1.23
PCNX1-207ENST00000554691 LMNTD2Q8IXW0 634 aa7.36□□□□□ -1.23
PCNX1-207ENST00000554691 TDRD7Q8NHU6 1098 aaKnown RBP7.36□□□□□ -1.23
PCNX1-207ENST00000554691 EVI5LQ96CN4 794 aa7.36□□□□□ -1.23
PCNX1-207ENST00000554691 RLBP1P12271 317 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 TEFQ10587 303 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 CWC27Q6UX04 472 aaKnown RBP7.35□□□□□ -1.23
PCNX1-207ENST00000554691 AOPEPQ8N6M6 819 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 GPT2Q8TD30 523 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 IFT74Q96LB3 600 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 RAI14Q9P0K7 980 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 LUC7L3O95232 432 aaKnown RBP7.35□□□□□ -1.23
PCNX1-207ENST00000554691 NBPF7P0C2Y1 421 aaPredicted RBP7.35□□□□□ -1.23
PCNX1-207ENST00000554691 BRPF1P55201 1214 aaPredicted RBP7.35□□□□□ -1.23
PCNX1-207ENST00000554691 APBA1Q02410 837 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 CACNA2D4Q7Z3S7 1137 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 TMEM87AQ8NBN3 555 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 CARD6Q9BX69 1037 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 GGNBP2Q9H3C7 697 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 SUDS3Q9H7L9 328 aaPredicted RBP7.35□□□□□ -1.23
PCNX1-207ENST00000554691 VAV2P52735 878 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 ATP2B3Q16720 1220 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 PRPF40BQ6NWY9 871 aaKnown RBP7.35□□□□□ -1.23
PCNX1-207ENST00000554691 CNGA4Q8IV77 575 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.35□□□□□ -1.232e-6■■■□□ 14.6
PCNX1-207ENST00000554691 CABS1Q96KC9 395 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 GCC2Q8IWJ2 1684 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.35□□□□□ -1.23
PCNX1-207ENST00000554691 GOLGA6CA6NDK9 693 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 PPFIA4O75335 1185 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 FGFR1OPO95684 399 aaKnown RBP7.35□□□□□ -1.23
PCNX1-207ENST00000554691 GOLGA6DP0CG33 693 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 RAD51AP2Q09MP3 1159 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 TRIM14Q14142 442 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 WHAMMP3Q1A5X7 153 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 CCDC129Q6ZRS4 1044 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 ATRIPQ8WXE1 791 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 GOLGA6AQ9NYA3 693 aa7.35□□□□□ -1.23
PCNX1-207ENST00000554691 CTIFO43310 598 aaKnown RBP7.34□□□□□ -1.23
PCNX1-207ENST00000554691 KRT86O43790 486 aa7.34□□□□□ -1.23
PCNX1-207ENST00000554691 CYP2C19P33261 490 aa7.34□□□□□ -1.23
PCNX1-207ENST00000554691 LACTBP83111 547 aaPredicted RBP7.34□□□□□ -1.23
PCNX1-207ENST00000554691 FAM160A1Q05DH4 1040 aa7.34□□□□□ -1.23
PCNX1-207ENST00000554691 CEP85LQ5SZL2 805 aa7.34□□□□□ -1.23
PCNX1-207ENST00000554691 NEK11Q8NG66 645 aa7.34□□□□□ -1.23
PCNX1-207ENST00000554691 C8orf76Q96K31 380 aa7.34□□□□□ -1.23
PCNX1-207ENST00000554691 PSD3Q9NYI0 1048 aa7.34□□□□□ -1.23
PCNX1-207ENST00000554691 ABCA10Q8WWZ4 1543 aa7.34□□□□□ -1.23
PCNX1-207ENST00000554691 ZNF521Q96K83 1311 aa7.34□□□□□ -1.23
PCNX1-207ENST00000554691 SH2D4BQ5SQS7 431 aa7.34□□□□□ -1.23
PCNX1-207ENST00000554691 LRRC8AQ8IWT6 810 aa7.34□□□□□ -1.23
PCNX1-207ENST00000554691 CNNM3Q8NE01 707 aa7.34□□□□□ -1.23
PCNX1-207ENST00000554691 NUP133Q8WUM0 1156 aa7.34□□□□□ -1.23
PCNX1-207ENST00000554691 DDX12PQ92771 950 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms