RNA–Protein interactions for RNA: ENST00000554327.5

ITGA7-208, Transcript of integrin subunit alpha 7, humanhuman

TSL 2

Gene ITGA7, Length 1,965 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-208ENST00000554327 TTC22Q5TAA0 569 aa20.3■□□□□ 0.84
ITGA7-208ENST00000554327 GIGYF2Q6Y7W6 1299 aaKnown RBP20.3■□□□□ 0.84
ITGA7-208ENST00000554327 PPP1R42Q7Z4L9 355 aa20.3■□□□□ 0.84
ITGA7-208ENST00000554327 KAZALD1Q96I82 304 aa20.3■□□□□ 0.84
ITGA7-208ENST00000554327 SUCLG2Q96I99 432 aa20.3■□□□□ 0.84
ITGA7-208ENST00000554327 GSPT1P15170 499 aaKnown RBP20.3■□□□□ 0.84
ITGA7-208ENST00000554327 POLA2Q14181 598 aa20.3■□□□□ 0.84
ITGA7-208ENST00000554327 UBR3Q6ZT12 1888 aa20.29■□□□□ 0.84
ITGA7-208ENST00000554327 AMIGO3Q86WK7 504 aa20.29■□□□□ 0.84
ITGA7-208ENST00000554327 ISCA1Q9BUE6 129 aa20.29■□□□□ 0.84
ITGA7-208ENST00000554327 LRRCC1Q9C099 1032 aa20.29■□□□□ 0.84
ITGA7-208ENST00000554327 SCN7AQ01118 1682 aa20.29■□□□□ 0.84
ITGA7-208ENST00000554327 A0A087WZG4 1122 aa20.28■□□□□ 0.84
ITGA7-208ENST00000554327 UBE3BQ7Z3V4 1068 aa20.28■□□□□ 0.84
ITGA7-208ENST00000554327 CWC25Q9NXE8 425 aaPredicted RBP20.28■□□□□ 0.84
ITGA7-208ENST00000554327 HDAC5Q9UQL6 1122 aa20.28■□□□□ 0.84
ITGA7-208ENST00000554327 ERVV-1B6SEH8 477 aa20.27■□□□□ 0.84
ITGA7-208ENST00000554327 GNPATO15228 680 aa20.27■□□□□ 0.84
ITGA7-208ENST00000554327 GPTP24298 496 aa20.27■□□□□ 0.84
ITGA7-208ENST00000554327 RTL5Q5HYW3 569 aaPredicted RBP20.27■□□□□ 0.84
ITGA7-208ENST00000554327 RC3H1Q5TC82 1133 aaKnown RBP20.27■□□□□ 0.84
ITGA7-208ENST00000554327 DAXXQ9UER7 740 aaPredicted RBP20.27■□□□□ 0.84
ITGA7-208ENST00000554327 SRGAP3O43295 1099 aa20.26■□□□□ 0.83
ITGA7-208ENST00000554327 CAMTA2O94983 1202 aa20.26■□□□□ 0.83
ITGA7-208ENST00000554327 CASP7P55210 303 aa20.26■□□□□ 0.83
ITGA7-208ENST00000554327 CCDC191Q8NCU4 936 aa20.26■□□□□ 0.83
ITGA7-208ENST00000554327 C22orf23Q9BZE7 217 aa20.26■□□□□ 0.83
ITGA7-208ENST00000554327 BICC1Q9H694 974 aaKnown RBP20.26■□□□□ 0.83
ITGA7-208ENST00000554327 EPHA10Q5JZY3 1008 aa20.26■□□□□ 0.83
ITGA7-208ENST00000554327 TBC1D9Q6ZT07 1266 aa20.26■□□□□ 0.83
ITGA7-208ENST00000554327 PROM2Q8N271 834 aa20.26■□□□□ 0.83
ITGA7-208ENST00000554327 CDC45O75419 566 aa20.25■□□□□ 0.83
ITGA7-208ENST00000554327 H7C1W4 665 aa20.25■□□□□ 0.83
ITGA7-208ENST00000554327 RPS6KA4O75676 772 aa20.25■□□□□ 0.83
ITGA7-208ENST00000554327 APBA3O96018 575 aa20.25■□□□□ 0.83
ITGA7-208ENST00000554327 MTX1Q13505 466 aa20.25■□□□□ 0.83
ITGA7-208ENST00000554327 OSBPL3Q9H4L5 887 aa20.25■□□□□ 0.83
ITGA7-208ENST00000554327 MYH3P11055 1940 aa20.24■□□□□ 0.83
ITGA7-208ENST00000554327 UBN2Q6ZU65 1347 aa20.24■□□□□ 0.83
ITGA7-208ENST00000554327 RAB11FIP3O75154 756 aa20.24■□□□□ 0.83
ITGA7-208ENST00000554327 SURF6O75683 361 aaKnown RBP20.24■□□□□ 0.83
ITGA7-208ENST00000554327 SLC4A3P48751 1232 aa20.24■□□□□ 0.83
ITGA7-208ENST00000554327 PDE1AP54750 535 aa20.23■□□□□ 0.83
ITGA7-208ENST00000554327 TRIM28Q13263 835 aaKnown RBP20.23■□□□□ 0.83
ITGA7-208ENST00000554327 TXNRD1Q16881 649 aa20.23■□□□□ 0.83
ITGA7-208ENST00000554327 SLC27A3Q5K4L6 730 aa20.23■□□□□ 0.83
ITGA7-208ENST00000554327 NLRP10Q86W26 655 aa20.23■□□□□ 0.83
ITGA7-208ENST00000554327 RGPD3A6NKT7 1758 aaPredicted RBP20.23■□□□□ 0.83
ITGA7-208ENST00000554327 RGPD4Q7Z3J3 1758 aa20.23■□□□□ 0.83
ITGA7-208ENST00000554327 SALL3Q9BXA9 1300 aa20.23■□□□□ 0.83
ITGA7-208ENST00000554327 HSP90AB3PQ58FF7 597 aa20.23■□□□□ 0.83
ITGA7-208ENST00000554327 TUBGCP6Q96RT7 1819 aa20.22■□□□□ 0.83
ITGA7-208ENST00000554327 ZNF34Q8IZ26 560 aa20.22■□□□□ 0.83
ITGA7-208ENST00000554327 RTCBQ9Y3I0 505 aaKnown RBP20.22■□□□□ 0.83
ITGA7-208ENST00000554327 PHF14O94880 888 aa20.21■□□□□ 0.83
ITGA7-208ENST00000554327 AK7Q96M32 723 aa20.21■□□□□ 0.83
ITGA7-208ENST00000554327 PLSCR1O15162 318 aa20.21■□□□□ 0.83
ITGA7-208ENST00000554327 SDSP20132 328 aa20.21■□□□□ 0.83
ITGA7-208ENST00000554327 SYNE4Q8N205 404 aa20.21■□□□□ 0.83
ITGA7-208ENST00000554327 FAM89AQ96GI7 184 aa20.21■□□□□ 0.83
ITGA7-208ENST00000554327 SRP68Q9UHB9 627 aaKnown RBP20.21■□□□□ 0.83
ITGA7-208ENST00000554327 MX1P20591 662 aa20.2■□□□□ 0.82
ITGA7-208ENST00000554327 HSP90AB4PQ58FF6 505 aa20.2■□□□□ 0.82
ITGA7-208ENST00000554327 CASZ1Q86V15 1759 aa20.2■□□□□ 0.82
ITGA7-208ENST00000554327 BECN1Q14457 450 aa20.19■□□□□ 0.82
ITGA7-208ENST00000554327 RHPN1Q8TCX5 695 aa20.19■□□□□ 0.82
ITGA7-208ENST00000554327 ARHGEF1Q92888 912 aaKnown RBP20.19■□□□□ 0.82
ITGA7-208ENST00000554327 DDX60Q8IY21 1712 aaKnown RBP20.19■□□□□ 0.82
ITGA7-208ENST00000554327 FOXO4P98177 505 aa20.19■□□□□ 0.82
ITGA7-208ENST00000554327 USPL1Q5W0Q7 1092 aa20.19■□□□□ 0.82
ITGA7-208ENST00000554327 ZBTB38Q8NAP3 1195 aaPredicted RBP20.19■□□□□ 0.82
ITGA7-208ENST00000554327 KIF1BPQ96EK5 621 aa20.19■□□□□ 0.82
ITGA7-208ENST00000554327 BCL2L12Q9HB09 334 aa20.19■□□□□ 0.82
ITGA7-208ENST00000554327 EIF5BO60841 1220 aaKnown RBP20.18■□□□□ 0.82
ITGA7-208ENST00000554327 PCCAP05165 728 aaPredicted RBP20.18■□□□□ 0.82
ITGA7-208ENST00000554327 RBM25P49756 843 aaKnown RBP20.18■□□□□ 0.82
ITGA7-208ENST00000554327 IL1RAPL2Q9NP60 686 aa20.18■□□□□ 0.82
ITGA7-208ENST00000554327 STAP2Q9UGK3 403 aa20.18■□□□□ 0.82
ITGA7-208ENST00000554327 RABL6Q3YEC7 729 aaPredicted RBP20.17■□□□□ 0.82
ITGA7-208ENST00000554327 NARFQ9UHQ1 456 aa20.17■□□□□ 0.82
ITGA7-208ENST00000554327 PA2G4Q9UQ80 394 aaKnown RBP20.17■□□□□ 0.82
ITGA7-208ENST00000554327 NIP7Q9Y221 180 aaKnown RBP eCLIP20.17■□□□□ 0.82
ITGA7-208ENST00000554327 FAM177BA6PVY3 158 aa20.17■□□□□ 0.82
ITGA7-208ENST00000554327 SUSD4Q5VX71 490 aa20.17■□□□□ 0.82
ITGA7-208ENST00000554327 LAMB2P55268 1798 aa20.17■□□□□ 0.82
ITGA7-208ENST00000554327 COL24A1Q17RW2 1714 aa20.16■□□□□ 0.82
ITGA7-208ENST00000554327 KLHDC4Q8TBB5 520 aa20.16■□□□□ 0.82
ITGA7-208ENST00000554327 TRMT112Q9UI30 125 aaKnown RBP20.16■□□□□ 0.82
ITGA7-208ENST00000554327 ZNF652Q9Y2D9 606 aa20.16■□□□□ 0.82
ITGA7-208ENST00000554327 TRAPPC3LQ5T215 181 aa20.15■□□□□ 0.82
ITGA7-208ENST00000554327 TSHZ3Q63HK5 1081 aa20.15■□□□□ 0.82
ITGA7-208ENST00000554327 LMBR1LQ6UX01 489 aa20.15■□□□□ 0.82
ITGA7-208ENST00000554327 CLEC4GQ6UXB4 293 aa20.15■□□□□ 0.82
ITGA7-208ENST00000554327 AOX1Q06278 1338 aa20.15■□□□□ 0.82
ITGA7-208ENST00000554327 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.15■□□□□ 0.82
ITGA7-208ENST00000554327 OS9Q13438 667 aaPredicted RBP20.15■□□□□ 0.82
ITGA7-208ENST00000554327 CASC1Q6TDU7 716 aa20.15■□□□□ 0.82
ITGA7-208ENST00000554327 ZPR1O75312 459 aa20.14■□□□□ 0.81
ITGA7-208ENST00000554327 ZNF827Q17R98 1081 aa20.14■□□□□ 0.81
ITGA7-208ENST00000554327 TBC1D9BQ66K14 1250 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms