RNA–Protein interactions for RNA: ENST00000553043.1

LETMD1-236, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-236ENST00000553043 TTC5Q8N0Z6 440 aa9.23□□□□□ -0.93
LETMD1-236ENST00000553043 SLC17A8Q8NDX2 589 aa9.23□□□□□ -0.93
LETMD1-236ENST00000553043 CCDC102AQ96A19 550 aa9.23□□□□□ -0.93
LETMD1-236ENST00000553043 CSRNP1Q96S65 589 aa9.23□□□□□ -0.93
LETMD1-236ENST00000553043 PGAP2Q9UHJ9 254 aa9.23□□□□□ -0.93
LETMD1-236ENST00000553043 COL4A5P29400 1685 aa9.23□□□□□ -0.93
LETMD1-236ENST00000553043 TCERG1O14776 1098 aaKnown RBP9.22□□□□□ -0.93
LETMD1-236ENST00000553043 A1BGP04217 495 aa9.22□□□□□ -0.93
LETMD1-236ENST00000553043 GMPSP49915 693 aaPredicted RBP9.22□□□□□ -0.93
LETMD1-236ENST00000553043 TPTE2Q6XPS3 522 aa9.22□□□□□ -0.93
LETMD1-236ENST00000553043 DZIP3Q86Y13 1208 aaKnown RBP9.22□□□□□ -0.93
LETMD1-236ENST00000553043 GBA2Q9HCG7 927 aaPredicted RBP9.22□□□□□ -0.93
LETMD1-236ENST00000553043 KIF20BQ96Q89 1820 aa9.21□□□□□ -0.93
LETMD1-236ENST00000553043 CACNA1SQ13698 1873 aa9.21□□□□□ -0.93
LETMD1-236ENST00000553043 TRPM7Q96QT4 1865 aa9.21□□□□□ -0.93
LETMD1-236ENST00000553043 GTF2E1P29083 439 aaPredicted RBP9.21□□□□□ -0.94
LETMD1-236ENST00000553043 PLCB2Q00722 1185 aa9.21□□□□□ -0.94
LETMD1-236ENST00000553043 CC2D2BQ6DHV5 1058 aa9.21□□□□□ -0.94
LETMD1-236ENST00000553043 SLC51AQ86UW1 340 aa9.21□□□□□ -0.94
LETMD1-236ENST00000553043 C2orf69Q8N8R5 385 aa9.21□□□□□ -0.94
LETMD1-236ENST00000553043 TRPM4Q8TD43 1214 aa9.21□□□□□ -0.94
LETMD1-236ENST00000553043 ZC3H15Q8WU90 426 aaKnown RBP9.21□□□□□ -0.94
LETMD1-236ENST00000553043 ZNF296Q8WUU4 475 aaPredicted RBP9.21□□□□□ -0.94
LETMD1-236ENST00000553043 ZNF496Q96IT1 587 aaPredicted RBP9.21□□□□□ -0.94
LETMD1-236ENST00000553043 BCL2L13Q9BXK5 485 aa9.21□□□□□ -0.94
LETMD1-236ENST00000553043 COLQQ9Y215 455 aaPredicted RBP9.21□□□□□ -0.94
LETMD1-236ENST00000553043 ANKRD26Q9UPS8 1709 aa9.21□□□□□ -0.94
LETMD1-236ENST00000553043 PPIP5K2O43314 1243 aa9.2□□□□□ -0.94
LETMD1-236ENST00000553043 TBC1D8O95759 1140 aa9.2□□□□□ -0.94
LETMD1-236ENST00000553043 PIP4K2AP48426 406 aaPredicted RBP9.2□□□□□ -0.94
LETMD1-236ENST00000553043 CXCL9Q07325 125 aa9.2□□□□□ -0.94
LETMD1-236ENST00000553043 AOC3Q16853 763 aa9.2□□□□□ -0.94
LETMD1-236ENST00000553043 TEX13AQ9BXU3 409 aaPredicted RBP9.2□□□□□ -0.94
LETMD1-236ENST00000553043 NPC1L1Q9UHC9 1359 aa9.2□□□□□ -0.94
LETMD1-236ENST00000553043 SHTN1A0MZ66 631 aa9.19□□□□□ -0.94
LETMD1-236ENST00000553043 POTEFA5A3E0 1075 aa9.19□□□□□ -0.94
LETMD1-236ENST00000553043 FBXO46Q6PJ61 603 aaPredicted RBP9.19□□□□□ -0.94
LETMD1-236ENST00000553043 NIP7Q9Y221 180 aaKnown RBP eCLIP9.19□□□□□ -0.94
LETMD1-236ENST00000553043 SNED1Q8TER0 1413 aa9.19□□□□□ -0.94
LETMD1-236ENST00000553043 RAD17O75943 681 aa9.18□□□□□ -0.94
LETMD1-236ENST00000553043 SLC10A3P09131 477 aa9.18□□□□□ -0.94
LETMD1-236ENST00000553043 CLEC4GQ6UXB4 293 aa9.18□□□□□ -0.94
LETMD1-236ENST00000553043 KRT26Q7Z3Y9 468 aa9.18□□□□□ -0.94
LETMD1-236ENST00000553043 CNOT7Q9UIV1 285 aaKnown RBP9.18□□□□□ -0.94
LETMD1-236ENST00000553043 HEG1Q9ULI3 1381 aa9.18□□□□□ -0.94
LETMD1-236ENST00000553043 ZNRF3Q9ULT6 936 aa9.18□□□□□ -0.94
LETMD1-236ENST00000553043 ZNF652Q9Y2D9 606 aa9.18□□□□□ -0.94
LETMD1-236ENST00000553043 ARFGEF2Q9Y6D5 1785 aa9.18□□□□□ -0.94
LETMD1-236ENST00000553043 ADM5C9JUS6 153 aa9.17□□□□□ -0.94
LETMD1-236ENST00000553043 ZBTB22O15209 634 aa9.17□□□□□ -0.94
LETMD1-236ENST00000553043 ZNF790Q6PG37 636 aa9.17□□□□□ -0.94
LETMD1-236ENST00000553043 RPGRQ92834 1020 aaKnown RBP9.17□□□□□ -0.94
LETMD1-236ENST00000553043 BCORQ6W2J9 1755 aa9.17□□□□□ -0.94
LETMD1-236ENST00000553043 SCN7AQ01118 1682 aa9.16□□□□□ -0.94
LETMD1-236ENST00000553043 MRC1P22897 1456 aa9.16□□□□□ -0.94
LETMD1-236ENST00000553043 H7C1D1 291 aa9.16□□□□□ -0.94
LETMD1-236ENST00000553043 GPR25O00155 361 aa9.16□□□□□ -0.94
LETMD1-236ENST00000553043 PPEF1O14829 653 aaPredicted RBP9.16□□□□□ -0.94
LETMD1-236ENST00000553043 MTHFSDQ2M296 383 aaKnown RBP9.16□□□□□ -0.94
LETMD1-236ENST00000553043 GRIPAP1Q4V328 841 aa9.16□□□□□ -0.94
LETMD1-236ENST00000553043 SAMD7Q7Z3H4 446 aa9.16□□□□□ -0.94
LETMD1-236ENST00000553043 NUTM1Q86Y26 1132 aa9.16□□□□□ -0.94
LETMD1-236ENST00000553043 MICALL2Q8IY33 904 aa9.16□□□□□ -0.94
LETMD1-236ENST00000553043 HMOX1P09601 288 aa9.15□□□□□ -0.94
LETMD1-236ENST00000553043 TNIP1Q15025 636 aa9.15□□□□□ -0.94
LETMD1-236ENST00000553043 CRY2Q49AN0 593 aa9.15□□□□□ -0.94
LETMD1-236ENST00000553043 TBC1D10BQ4KMP7 808 aaPredicted RBP9.15□□□□□ -0.94
LETMD1-236ENST00000553043 RBM26Q5T8P6 1007 aaKnown RBP9.15□□□□□ -0.94
LETMD1-236ENST00000553043 RASAL3Q86YV0 1011 aa9.15□□□□□ -0.94
LETMD1-236ENST00000553043 REM2Q8IYK8 340 aaPredicted RBP9.15□□□□□ -0.94
LETMD1-236ENST00000553043 DCPSQ96C86 337 aaKnown RBP9.15□□□□□ -0.94
LETMD1-236ENST00000553043 FMNL2Q96PY5 1086 aa9.15□□□□□ -0.94
LETMD1-236ENST00000553043 TMX4Q9H1E5 349 aaPredicted RBP9.15□□□□□ -0.94
LETMD1-236ENST00000553043 USP16Q9Y5T5 823 aa9.15□□□□□ -0.94
LETMD1-236ENST00000553043 SCN11AQ9UI33 1791 aa9.14□□□□□ -0.95
LETMD1-236ENST00000553043 CDHR2Q9BYE9 1310 aa9.14□□□□□ -0.95
LETMD1-236ENST00000553043 EN2P19622 333 aaPredicted RBP9.14□□□□□ -0.95
LETMD1-236ENST00000553043 IL13P35225 146 aa9.14□□□□□ -0.95
LETMD1-236ENST00000553043 TEFQ10587 303 aa9.14□□□□□ -0.95
LETMD1-236ENST00000553043 RBM17Q96I25 401 aaKnown RBP9.14□□□□□ -0.95
LETMD1-236ENST00000553043 POLR3GLQ9BT43 218 aa9.14□□□□□ -0.95
LETMD1-236ENST00000553043 ZBTB12Q9Y330 459 aaPredicted RBP9.14□□□□□ -0.95
LETMD1-236ENST00000553043 ABCC12Q96J65 1359 aa9.13□□□□□ -0.95
LETMD1-236ENST00000553043 PRAMEF22A3QJZ6 481 aa9.13□□□□□ -0.95
LETMD1-236ENST00000553043 KCNQ3O43525 872 aa9.13□□□□□ -0.95
LETMD1-236ENST00000553043 FKTNO75072 461 aa9.13□□□□□ -0.95
LETMD1-236ENST00000553043 EGFRP00533 1210 aa9.13□□□□□ -0.95
LETMD1-236ENST00000553043 HOXA10P31260 410 aaPredicted RBP9.13□□□□□ -0.95
LETMD1-236ENST00000553043 HLFQ16534 295 aa9.13□□□□□ -0.95
LETMD1-236ENST00000553043 HOMEZQ8IX15 550 aa9.13□□□□□ -0.95
LETMD1-236ENST00000553043 VPS33BQ9H267 617 aa9.13□□□□□ -0.95
LETMD1-236ENST00000553043 TRIOBPQ9H2D6 2365 aa9.12□□□□□ -0.95
LETMD1-236ENST00000553043 INTS3Q68E01 1043 aaKnown RBP9.12□□□□□ -0.95
LETMD1-236ENST00000553043 SULF1Q8IWU6 871 aa9.12□□□□□ -0.95
LETMD1-236ENST00000553043 SUPT20HQ8NEM7 779 aa9.12□□□□□ -0.95
LETMD1-236ENST00000553043 CRAMP1Q96RY5 1269 aa9.12□□□□□ -0.95
LETMD1-236ENST00000553043 TRIM17Q9Y577 477 aa9.12□□□□□ -0.95
LETMD1-236ENST00000553043 YDJCA8MPS7 323 aa9.11□□□□□ -0.95
LETMD1-236ENST00000553043 H0YGN5 161 aa9.11□□□□□ -0.95
LETMD1-236ENST00000553043 KIAA2012Q0VF49 1180 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms