RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 ADRA2BP18089 450 aa13.57□□□□□ -0.24
LINC00661-206ENST00000552608 POLA2Q14181 598 aa13.57□□□□□ -0.24
LINC00661-206ENST00000552608 HLFQ16534 295 aa13.57□□□□□ -0.24
LINC00661-206ENST00000552608 CDHR2Q9BYE9 1310 aa13.57□□□□□ -0.24
LINC00661-206ENST00000552608 LAMB2P55268 1798 aa13.56□□□□□ -0.24
LINC00661-206ENST00000552608 ZPR1O75312 459 aa13.56□□□□□ -0.24
LINC00661-206ENST00000552608 APBA3O96018 575 aa13.56□□□□□ -0.24
LINC00661-206ENST00000552608 TXNRD1Q16881 649 aa13.56□□□□□ -0.24
LINC00661-206ENST00000552608 NLRP10Q86W26 655 aa13.56□□□□□ -0.24
LINC00661-206ENST00000552608 ZNF34Q8IZ26 560 aa13.56□□□□□ -0.24
LINC00661-206ENST00000552608 ZBTB38Q8NAP3 1195 aaPredicted RBP13.56□□□□□ -0.24
LINC00661-206ENST00000552608 BICC1Q9H694 974 aaKnown RBP13.56□□□□□ -0.24
LINC00661-206ENST00000552608 SURF6O75683 361 aaKnown RBP13.55□□□□□ -0.24
LINC00661-206ENST00000552608 GPTP24298 496 aa13.55□□□□□ -0.24
LINC00661-206ENST00000552608 CASP7P55210 303 aa13.55□□□□□ -0.24
LINC00661-206ENST00000552608 KCNQ4P56696 695 aa13.55□□□□□ -0.24
LINC00661-206ENST00000552608 OS9Q13438 667 aaPredicted RBP13.55□□□□□ -0.24
LINC00661-206ENST00000552608 TRAPPC3LQ5T215 181 aa13.55□□□□□ -0.24
LINC00661-206ENST00000552608 ERC1Q8IUD2 1116 aa13.55□□□□□ -0.24
LINC00661-206ENST00000552608 LRRCC1Q9C099 1032 aa13.55□□□□□ -0.24
LINC00661-206ENST00000552608 NARFQ9UHQ1 456 aa13.55□□□□□ -0.24
LINC00661-206ENST00000552608 TRMT112Q9UI30 125 aaKnown RBP13.55□□□□□ -0.24
LINC00661-206ENST00000552608 RFC4P35249 363 aa13.54□□□□□ -0.24
LINC00661-206ENST00000552608 RABL6Q3YEC7 729 aaPredicted RBP13.54□□□□□ -0.24
LINC00661-206ENST00000552608 PLA2G12BQ9BX93 195 aa13.54□□□□□ -0.24
LINC00661-206ENST00000552608 LNPKQ9C0E8 428 aa13.54□□□□□ -0.24
LINC00661-206ENST00000552608 NIP7Q9Y221 180 aaKnown RBP eCLIP13.54□□□□□ -0.24
LINC00661-206ENST00000552608 EXOC6BQ9Y2D4 811 aa13.54□□□□□ -0.24
LINC00661-206ENST00000552608 SSFA2P28290 1259 aa13.53□□□□□ -0.24
LINC00661-206ENST00000552608 G3BP1Q13283 466 aaKnown RBP eCLIP13.53□□□□□ -0.24
LINC00661-206ENST00000552608 SF3B2Q13435 895 aaKnown RBP13.53□□□□□ -0.24
LINC00661-206ENST00000552608 KIF1BPQ96EK5 621 aa13.53□□□□□ -0.24
LINC00661-206ENST00000552608 KAZALD1Q96I82 304 aa13.53□□□□□ -0.24
LINC00661-206ENST00000552608 UTP14AQ9BVJ6 771 aaKnown RBP13.53□□□□□ -0.24
LINC00661-206ENST00000552608 LRRC4BQ9NT99 713 aa13.53□□□□□ -0.24
LINC00661-206ENST00000552608 NOP58Q9Y2X3 529 aaKnown RBP13.53□□□□□ -0.24
LINC00661-206ENST00000552608 APBB1O00213 710 aa13.52□□□□□ -0.25
LINC00661-206ENST00000552608 LMBR1LQ6UX01 489 aa13.52□□□□□ -0.25
LINC00661-206ENST00000552608 JARID2Q92833 1246 aaPredicted RBP13.52□□□□□ -0.25
LINC00661-206ENST00000552608 CHMP3Q9Y3E7 222 aa13.52□□□□□ -0.25
LINC00661-206ENST00000552608 SH3TC1Q8TE82 1336 aa13.52□□□□□ -0.25
LINC00661-206ENST00000552608 COL24A1Q17RW2 1714 aa13.52□□□□□ -0.25
LINC00661-206ENST00000552608 PHF14O94880 888 aa13.51□□□□□ -0.25
LINC00661-206ENST00000552608 FOXO4P98177 505 aa13.51□□□□□ -0.25
LINC00661-206ENST00000552608 RTL5Q5HYW3 569 aaPredicted RBP13.51□□□□□ -0.25
LINC00661-206ENST00000552608 USPL1Q5W0Q7 1092 aa13.51□□□□□ -0.25
LINC00661-206ENST00000552608 FLAD1Q8NFF5 587 aa13.51□□□□□ -0.25
LINC00661-206ENST00000552608 ARHGEF1Q92888 912 aaKnown RBP13.51□□□□□ -0.25
LINC00661-206ENST00000552608 FAM89AQ96GI7 184 aa13.51□□□□□ -0.25
LINC00661-206ENST00000552608 NYXQ9GZU5 481 aa13.51□□□□□ -0.25
LINC00661-206ENST00000552608 DDX60Q8IY21 1712 aaKnown RBP13.5□□□□□ -0.25
LINC00661-206ENST00000552608 UBN2Q6ZU65 1347 aa13.5□□□□□ -0.25
LINC00661-206ENST00000552608 USP42Q9H9J4 1324 aaKnown RBP13.5□□□□□ -0.25
LINC00661-206ENST00000552608 IRS4O14654 1257 aaPredicted RBP13.5□□□□□ -0.25
LINC00661-206ENST00000552608 PDE8AO60658 829 aa13.5□□□□□ -0.25
LINC00661-206ENST00000552608 PDE4AP27815 886 aa13.5□□□□□ -0.25
LINC00661-206ENST00000552608 EPHA10Q5JZY3 1008 aa13.5□□□□□ -0.25
LINC00661-206ENST00000552608 SUSD4Q5VX71 490 aa13.5□□□□□ -0.25
LINC00661-206ENST00000552608 SKAP1Q86WV1 359 aa13.5□□□□□ -0.25
LINC00661-206ENST00000552608 RHPN1Q8TCX5 695 aa13.5□□□□□ -0.25
LINC00661-206ENST00000552608 SETDB2Q96T68 719 aa13.5□□□□□ -0.25
LINC00661-206ENST00000552608 COPRSQ9NQ92 184 aa13.5□□□□□ -0.25
LINC00661-206ENST00000552608 GTF2E1P29083 439 aaPredicted RBP13.49□□□□□ -0.25
LINC00661-206ENST00000552608 BAG6P46379 1132 aa13.49□□□□□ -0.25
LINC00661-206ENST00000552608 CCDC57Q2TAC2 916 aa13.49□□□□□ -0.25
LINC00661-206ENST00000552608 FAM161AQ3B820 660 aa13.49□□□□□ -0.25
LINC00661-206ENST00000552608 CLASRPQ8N2M8 674 aaKnown RBP13.49□□□□□ -0.25
LINC00661-206ENST00000552608 FBXO3Q9UK99 471 aa13.49□□□□□ -0.25
LINC00661-206ENST00000552608 CASZ1Q86V15 1759 aa13.49□□□□□ -0.25
LINC00661-206ENST00000552608 TUBGCP6Q96RT7 1819 aa13.48□□□□□ -0.25
LINC00661-206ENST00000552608 QSER1Q2KHR3 1735 aa13.48□□□□□ -0.25
LINC00661-206ENST00000552608 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.48□□□□□ -0.25
LINC00661-206ENST00000552608 SMARCA5O60264 1052 aaPredicted RBP13.48□□□□□ -0.25
LINC00661-206ENST00000552608 NTSR2O95665 410 aa13.48□□□□□ -0.25
LINC00661-206ENST00000552608 CTSWP56202 376 aa13.48□□□□□ -0.25
LINC00661-206ENST00000552608 TAF7LQ5H9L4 462 aa13.48□□□□□ -0.25
LINC00661-206ENST00000552608 SRP68Q9UHB9 627 aaKnown RBP13.48□□□□□ -0.25
LINC00661-206ENST00000552608 ANKRD18BA2A2Z9 1011 aa13.47□□□□□ -0.25
LINC00661-206ENST00000552608 FAM177BA6PVY3 158 aa13.47□□□□□ -0.25
LINC00661-206ENST00000552608 CSF1RP07333 972 aa13.47□□□□□ -0.25
LINC00661-206ENST00000552608 RFX5P48382 616 aaPredicted RBP13.47□□□□□ -0.25
LINC00661-206ENST00000552608 IFIT5Q13325 482 aaKnown RBP13.47□□□□□ -0.25
LINC00661-206ENST00000552608 PROM2Q8N271 834 aa13.47□□□□□ -0.25
LINC00661-206ENST00000552608 BCL11AQ9H165 835 aa13.47□□□□□ -0.25
LINC00661-206ENST00000552608 BCL2L12Q9HB09 334 aa13.47□□□□□ -0.25
LINC00661-206ENST00000552608 TFCP2L1Q9NZI6 479 aa13.47□□□□□ -0.25
LINC00661-206ENST00000552608 PA2G4Q9UQ80 394 aaKnown RBP13.47□□□□□ -0.25
LINC00661-206ENST00000552608 CARMIL3Q8ND23 1372 aa13.46□□□□□ -0.25
LINC00661-206ENST00000552608 NPHP1O15259 732 aa13.46□□□□□ -0.25
LINC00661-206ENST00000552608 EIF5BO60841 1220 aaKnown RBP13.46□□□□□ -0.25
LINC00661-206ENST00000552608 IL15P40933 162 aaPredicted RBP13.46□□□□□ -0.25
LINC00661-206ENST00000552608 PTPN12Q05209 780 aaKnown RBP13.46□□□□□ -0.25
LINC00661-206ENST00000552608 TBC1D9BQ66K14 1250 aa13.46□□□□□ -0.25
LINC00661-206ENST00000552608 TPTE2Q6XPS3 522 aa13.46□□□□□ -0.25
LINC00661-206ENST00000552608 BICDL1Q6ZP65 573 aa13.46□□□□□ -0.25
LINC00661-206ENST00000552608 ILDR1Q86SU0 546 aaPredicted RBP13.46□□□□□ -0.25
LINC00661-206ENST00000552608 PLEKHM2Q8IWE5 1019 aa13.46□□□□□ -0.25
LINC00661-206ENST00000552608 GPATCH3Q96I76 525 aa13.46□□□□□ -0.25
LINC00661-206ENST00000552608 SIL1Q9H173 461 aa13.46□□□□□ -0.25
LINC00661-206ENST00000552608 AOX1Q06278 1338 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms