RNA–Protein interactions for RNA: ENST00000552495.1

RITA1-203, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

TSL 2 BASIC

Gene RITA1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-203ENST00000552495 FOXO4P98177 505 aa28.42■■■□□ 2.14
RITA1-203ENST00000552495 TRIM28Q13263 835 aaKnown RBP28.42■■■□□ 2.14
RITA1-203ENST00000552495 LMBR1LQ6UX01 489 aa28.42■■■□□ 2.14
RITA1-203ENST00000552495 CCDC9Q9Y3X0 531 aaKnown RBP28.42■■■□□ 2.14
RITA1-203ENST00000552495 DOT1LQ8TEK3 1739 aa28.41■■■□□ 2.14
RITA1-203ENST00000552495 CYP19A1P11511 503 aaPredicted RBP28.41■■■□□ 2.14
RITA1-203ENST00000552495 KAT6BQ8WYB5 2073 aa28.41■■■□□ 2.14
RITA1-203ENST00000552495 TJP1Q07157 1748 aa28.41■■■□□ 2.14
RITA1-203ENST00000552495 ANO2Q9NQ90 1003 aa28.4■■■□□ 2.14
RITA1-203ENST00000552495 SLC4A9Q96Q91 983 aa28.39■■■□□ 2.14
RITA1-203ENST00000552495 CHMP5Q9NZZ3 219 aa28.39■■■□□ 2.14
RITA1-203ENST00000552495 CCDC8Q9H0W5 538 aaPredicted RBP28.38■■■□□ 2.13
RITA1-203ENST00000552495 MAP3K15Q6ZN16 1313 aa28.38■■■□□ 2.13
RITA1-203ENST00000552495 CD2BP2O95400 341 aaKnown RBP28.38■■■□□ 2.13
RITA1-203ENST00000552495 EVI5LQ96CN4 794 aa28.38■■■□□ 2.13
RITA1-203ENST00000552495 CHMP3Q9Y3E7 222 aa28.38■■■□□ 2.13
RITA1-203ENST00000552495 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.38■■■□□ 2.13
RITA1-203ENST00000552495 ST18O60284 1047 aa28.37■■■□□ 2.13
RITA1-203ENST00000552495 ANAPC15P60006 121 aa28.36■■■□□ 2.13
RITA1-203ENST00000552495 HSP90AB3PQ58FF7 597 aa28.36■■■□□ 2.13
RITA1-203ENST00000552495 GIGYF2Q6Y7W6 1299 aaKnown RBP28.36■■■□□ 2.13
RITA1-203ENST00000552495 MARCH10Q8NA82 808 aaPredicted RBP28.36■■■□□ 2.13
RITA1-203ENST00000552495 SGSM2O43147 1006 aa28.35■■■□□ 2.13
RITA1-203ENST00000552495 HSP90AA1P07900 732 aaKnown RBP28.35■■■□□ 2.13
RITA1-203ENST00000552495 RUFY2Q8WXA3 655 aa28.35■■■□□ 2.13
RITA1-203ENST00000552495 ARXQ96QS3 562 aa28.35■■■□□ 2.13
RITA1-203ENST00000552495 JCADQ9P266 1359 aa28.34■■■□□ 2.13
RITA1-203ENST00000552495 TFCP2Q12800 502 aa28.34■■■□□ 2.13
RITA1-203ENST00000552495 TNNI3KQ59H18 835 aa28.34■■■□□ 2.13
RITA1-203ENST00000552495 DIAPH3Q9NSV4 1193 aa28.34■■■□□ 2.13
RITA1-203ENST00000552495 FPGT-TNNI3KV9GXZ4 949 aa28.34■■■□□ 2.13
RITA1-203ENST00000552495 FRAT2O75474 233 aaPredicted RBP28.33■■■□□ 2.13
RITA1-203ENST00000552495 IL6STP40189 918 aaPredicted RBP28.33■■■□□ 2.13
RITA1-203ENST00000552495 TLR7Q9NYK1 1049 aaKnown RBP28.33■■■□□ 2.13
RITA1-203ENST00000552495 PCCAP05165 728 aaPredicted RBP28.32■■■□□ 2.12
RITA1-203ENST00000552495 ZBTB1Q9Y2K1 713 aa28.32■■■□□ 2.12
RITA1-203ENST00000552495 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.32■■■□□ 2.12
RITA1-203ENST00000552495 HIP1O00291 1037 aa28.32■■■□□ 2.12
RITA1-203ENST00000552495 CIZ1Q9ULV3 898 aaPredicted RBP28.32■■■□□ 2.12
RITA1-203ENST00000552495 DDIT3P35638 169 aa28.31■■■□□ 2.12
RITA1-203ENST00000552495 KIAA1211Q6ZU35 1233 aa28.31■■■□□ 2.12
RITA1-203ENST00000552495 ZBTB38Q8NAP3 1195 aaPredicted RBP28.31■■■□□ 2.12
RITA1-203ENST00000552495 CWC27Q6UX04 472 aaKnown RBP28.3■■■□□ 2.12
RITA1-203ENST00000552495 IL17RAQ96F46 866 aa28.3■■■□□ 2.12
RITA1-203ENST00000552495 NGLY1Q96IV0 654 aa28.3■■■□□ 2.12
RITA1-203ENST00000552495 A0A0G2JS52 829 aa28.29■■■□□ 2.12
RITA1-203ENST00000552495 IL15P40933 162 aaPredicted RBP28.29■■■□□ 2.12
RITA1-203ENST00000552495 IL27Q8NEV9 243 aa28.29■■■□□ 2.12
RITA1-203ENST00000552495 ACSBG1Q96GR2 724 aa28.29■■■□□ 2.12
RITA1-203ENST00000552495 PLA2G12BQ9BX93 195 aa28.29■■■□□ 2.12
RITA1-203ENST00000552495 ERVV-1B6SEH8 477 aa28.29■■■□□ 2.12
RITA1-203ENST00000552495 IL25Q9H293 177 aa28.29■■■□□ 2.12
RITA1-203ENST00000552495 VPS72Q15906 364 aa28.28■■■□□ 2.12
RITA1-203ENST00000552495 ATP5JP18859 108 aa28.27■■■□□ 2.12
RITA1-203ENST00000552495 C8orf37Q96NL8 207 aa28.27■■■□□ 2.12
RITA1-203ENST00000552495 BOLA2Q9H3K6 86 aa28.27■■■□□ 2.12
RITA1-203ENST00000552495 GPR108Q9NPR9 543 aa28.27■■■□□ 2.12
RITA1-203ENST00000552495 DBNLQ9UJU6 430 aaKnown RBP28.27■■■□□ 2.12
RITA1-203ENST00000552495 RAD50Q92878 1312 aa28.27■■■□□ 2.12
RITA1-203ENST00000552495 CIAO1O76071 339 aa28.27■■■□□ 2.12
RITA1-203ENST00000552495 HSPA4P34932 840 aa28.27■■■□□ 2.12
RITA1-203ENST00000552495 HLFQ16534 295 aa28.27■■■□□ 2.12
RITA1-203ENST00000552495 CDHR2Q9BYE9 1310 aa28.26■■■□□ 2.11
RITA1-203ENST00000552495 EYA2O00167 538 aa28.26■■■□□ 2.11
RITA1-203ENST00000552495 CCDC57Q2TAC2 916 aa28.26■■■□□ 2.11
RITA1-203ENST00000552495 ATG9AQ7Z3C6 839 aa28.26■■■□□ 2.11
RITA1-203ENST00000552495 ATP6V1AP38606 617 aa28.25■■■□□ 2.11
RITA1-203ENST00000552495 NLRP10Q86W26 655 aa28.25■■■□□ 2.11
RITA1-203ENST00000552495 DZIP3Q86Y13 1208 aaKnown RBP28.25■■■□□ 2.11
RITA1-203ENST00000552495 SMARCC1Q92922 1105 aaPredicted RBP28.25■■■□□ 2.11
RITA1-203ENST00000552495 FAM89AQ96GI7 184 aa28.25■■■□□ 2.11
RITA1-203ENST00000552495 LSG1Q9H089 658 aaKnown RBP28.25■■■□□ 2.11
RITA1-203ENST00000552495 FBXO3Q9UK99 471 aa28.25■■■□□ 2.11
RITA1-203ENST00000552495 LOC102724428A0A0B4J2F2 783 aa28.25■■■□□ 2.11
RITA1-203ENST00000552495 MCM2P49736 904 aa28.25■■■□□ 2.11
RITA1-203ENST00000552495 SIK1P57059 783 aa28.25■■■□□ 2.11
RITA1-203ENST00000552495 PALD1Q9ULE6 856 aa28.25■■■□□ 2.11
RITA1-203ENST00000552495 BCL9LQ86UU0 1499 aa28.24■■■□□ 2.11
RITA1-203ENST00000552495 NEK4P51957 841 aa28.24■■■□□ 2.11
RITA1-203ENST00000552495 FAM98CQ17RN3 349 aaKnown RBP28.24■■■□□ 2.11
RITA1-203ENST00000552495 CCDC87Q9NVE4 849 aa28.24■■■□□ 2.11
RITA1-203ENST00000552495 ANKRD36CQ5JPF3 1778 aa28.24■■■□□ 2.11
RITA1-203ENST00000552495 FNBP4Q8N3X1 1017 aaPredicted RBP28.23■■■□□ 2.11
RITA1-203ENST00000552495 FSD1Q9BTV5 496 aa28.23■■■□□ 2.11
RITA1-203ENST00000552495 SPATA31A6Q5VVP1 1343 aa28.22■■■□□ 2.11
RITA1-203ENST00000552495 CSF1RP07333 972 aa28.22■■■□□ 2.11
RITA1-203ENST00000552495 GPTP24298 496 aa28.22■■■□□ 2.11
RITA1-203ENST00000552495 EIF5P55010 431 aaKnown RBP28.22■■■□□ 2.11
RITA1-203ENST00000552495 PALLDQ8WX93 1383 aa28.22■■■□□ 2.11
RITA1-203ENST00000552495 CICQ96RK0 1608 aaPredicted RBP28.21■■■□□ 2.11
RITA1-203ENST00000552495 INTS5Q6P9B9 1019 aaKnown RBP28.21■■■□□ 2.11
RITA1-203ENST00000552495 DBNDD2Q9BQY9 259 aa28.21■■■□□ 2.11
RITA1-203ENST00000552495 TBC1D2BQ9UPU7 963 aa28.21■■■□□ 2.11
RITA1-203ENST00000552495 CRKLP46109 303 aaKnown RBP28.2■■■□□ 2.1
RITA1-203ENST00000552495 ZNF594Q96JF6 807 aaPredicted RBP28.2■■■□□ 2.1
RITA1-203ENST00000552495 IFIT5Q13325 482 aaKnown RBP28.19■■■□□ 2.1
RITA1-203ENST00000552495 LRRC24Q50LG9 513 aa28.19■■■□□ 2.1
RITA1-203ENST00000552495 FOXD4L1Q9NU39 408 aa28.19■■■□□ 2.1
RITA1-203ENST00000552495 NUP98P52948 1817 aa28.19■■■□□ 2.1
RITA1-203ENST00000552495 NEUROD6Q96NK8 337 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms