RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 BICC1Q9H694 974 aaKnown RBP17.62■□□□□ 0.41
LETMD1-229ENST00000551261 PTF1AQ7RTS3 328 aa17.61■□□□□ 0.41
LETMD1-229ENST00000551261 NLRP10Q86W26 655 aa17.61■□□□□ 0.41
LETMD1-229ENST00000551261 ZNF34Q8IZ26 560 aa17.61■□□□□ 0.41
LETMD1-229ENST00000551261 ARXQ96QS3 562 aa17.61■□□□□ 0.41
LETMD1-229ENST00000551261 RGS17Q9UGC6 210 aaPredicted RBP17.61■□□□□ 0.41
LETMD1-229ENST00000551261 LAMB2P55268 1798 aa17.61■□□□□ 0.41
LETMD1-229ENST00000551261 TRIM37O94972 964 aa17.6■□□□□ 0.41
LETMD1-229ENST00000551261 RGS3P49796 1198 aa17.6■□□□□ 0.41
LETMD1-229ENST00000551261 KIF1BPQ96EK5 621 aa17.6■□□□□ 0.41
LETMD1-229ENST00000551261 KAZALD1Q96I82 304 aa17.6■□□□□ 0.41
LETMD1-229ENST00000551261 NARFQ9UHQ1 456 aa17.6■□□□□ 0.41
LETMD1-229ENST00000551261 GNPATO15228 680 aa17.59■□□□□ 0.41
LETMD1-229ENST00000551261 LNPKQ9C0E8 428 aa17.59■□□□□ 0.41
LETMD1-229ENST00000551261 FBXO3Q9UK99 471 aa17.59■□□□□ 0.41
LETMD1-229ENST00000551261 TBC1D2BQ9UPU7 963 aa17.59■□□□□ 0.41
LETMD1-229ENST00000551261 C4AP0C0L4 1744 aa17.58■□□□□ 0.41
LETMD1-229ENST00000551261 EIF5BO60841 1220 aaKnown RBP17.58■□□□□ 0.4
LETMD1-229ENST00000551261 SURF6O75683 361 aaKnown RBP17.58■□□□□ 0.4
LETMD1-229ENST00000551261 SSFA2P28290 1259 aa17.58■□□□□ 0.4
LETMD1-229ENST00000551261 HLFQ16534 295 aa17.58■□□□□ 0.4
LETMD1-229ENST00000551261 POTEAQ6S8J7 498 aa17.58■□□□□ 0.4
LETMD1-229ENST00000551261 COPRSQ9NQ92 184 aa17.58■□□□□ 0.4
LETMD1-229ENST00000551261 COL24A1Q17RW2 1714 aa17.58■□□□□ 0.4
LETMD1-229ENST00000551261 UBR3Q6ZT12 1888 aa17.57■□□□□ 0.4
LETMD1-229ENST00000551261 AOX1Q06278 1338 aa17.57■□□□□ 0.4
LETMD1-229ENST00000551261 SH3TC1Q8TE82 1336 aa17.57■□□□□ 0.4
LETMD1-229ENST00000551261 ZPR1O75312 459 aa17.57■□□□□ 0.4
LETMD1-229ENST00000551261 FAM161AQ3B820 660 aa17.57■□□□□ 0.4
LETMD1-229ENST00000551261 BMP2KLQ5H9B9 411 aa17.56■□□□□ 0.4
LETMD1-229ENST00000551261 EXOC6BQ9Y2D4 811 aa17.56■□□□□ 0.4
LETMD1-229ENST00000551261 MYH3P11055 1940 aa17.56■□□□□ 0.4
LETMD1-229ENST00000551261 PDE4AP27815 886 aa17.55■□□□□ 0.4
LETMD1-229ENST00000551261 FOXO4P98177 505 aa17.55■□□□□ 0.4
LETMD1-229ENST00000551261 G3BP1Q13283 466 aaKnown RBP eCLIP17.55■□□□□ 0.4
LETMD1-229ENST00000551261 OS9Q13438 667 aaPredicted RBP17.55■□□□□ 0.4
LETMD1-229ENST00000551261 TXNRD1Q16881 649 aa17.55■□□□□ 0.4
LETMD1-229ENST00000551261 TRAPPC3LQ5T215 181 aa17.55■□□□□ 0.4
LETMD1-229ENST00000551261 UTP14AQ9BVJ6 771 aaKnown RBP17.55■□□□□ 0.4
LETMD1-229ENST00000551261 NYXQ9GZU5 481 aa17.55■□□□□ 0.4
LETMD1-229ENST00000551261 OSBPL3Q9H4L5 887 aa17.55■□□□□ 0.4
LETMD1-229ENST00000551261 TRMT112Q9UI30 125 aaKnown RBP17.55■□□□□ 0.4
LETMD1-229ENST00000551261 UBN2Q6ZU65 1347 aa17.54■□□□□ 0.4
LETMD1-229ENST00000551261 USP42Q9H9J4 1324 aaKnown RBP17.54■□□□□ 0.4
LETMD1-229ENST00000551261 PDE8AO60658 829 aa17.54■□□□□ 0.4
LETMD1-229ENST00000551261 FLAD1Q8NFF5 587 aa17.54■□□□□ 0.4
LETMD1-229ENST00000551261 RHPN1Q8TCX5 695 aa17.54■□□□□ 0.4
LETMD1-229ENST00000551261 NIP7Q9Y221 180 aaKnown RBP eCLIP17.54■□□□□ 0.4
LETMD1-229ENST00000551261 RTL9Q8NET4 1388 aa17.53■□□□□ 0.4
LETMD1-229ENST00000551261 APBA3O96018 575 aa17.53■□□□□ 0.4
LETMD1-229ENST00000551261 CSF1RP07333 972 aa17.53■□□□□ 0.4
LETMD1-229ENST00000551261 GPTP24298 496 aa17.53■□□□□ 0.4
LETMD1-229ENST00000551261 RFC4P35249 363 aa17.53■□□□□ 0.4
LETMD1-229ENST00000551261 LMBR1LQ6UX01 489 aa17.53■□□□□ 0.4
LETMD1-229ENST00000551261 CLASRPQ8N2M8 674 aaKnown RBP17.53■□□□□ 0.4
LETMD1-229ENST00000551261 LRRC4BQ9NT99 713 aa17.53■□□□□ 0.4
LETMD1-229ENST00000551261 CIAO1O76071 339 aa17.52■□□□□ 0.4
LETMD1-229ENST00000551261 RFX5P48382 616 aaPredicted RBP17.52■□□□□ 0.4
LETMD1-229ENST00000551261 CCDC57Q2TAC2 916 aa17.52■□□□□ 0.4
LETMD1-229ENST00000551261 EPHA10Q5JZY3 1008 aa17.52■□□□□ 0.4
LETMD1-229ENST00000551261 GPATCH3Q96I76 525 aa17.52■□□□□ 0.4
LETMD1-229ENST00000551261 RIC1Q4ADV7 1423 aa17.52■□□□□ 0.4
LETMD1-229ENST00000551261 LRP5O75197 1615 aa17.51■□□□□ 0.39
LETMD1-229ENST00000551261 IRS4O14654 1257 aaPredicted RBP17.51■□□□□ 0.39
LETMD1-229ENST00000551261 NTSR2O95665 410 aa17.51■□□□□ 0.39
LETMD1-229ENST00000551261 CTSWP56202 376 aa17.51■□□□□ 0.39
LETMD1-229ENST00000551261 PTPN12Q05209 780 aaKnown RBP17.51■□□□□ 0.39
LETMD1-229ENST00000551261 ARHGEF1Q92888 912 aaKnown RBP17.51■□□□□ 0.39
LETMD1-229ENST00000551261 FAM89AQ96GI7 184 aa17.51■□□□□ 0.39
LETMD1-229ENST00000551261 BACH2Q9BYV9 841 aa17.51■□□□□ 0.39
LETMD1-229ENST00000551261 CARMIL3Q8ND23 1372 aa17.51■□□□□ 0.39
LETMD1-229ENST00000551261 TTC41PQ6P2S7 1318 aa17.5■□□□□ 0.39
LETMD1-229ENST00000551261 IL15P40933 162 aaPredicted RBP17.5■□□□□ 0.39
LETMD1-229ENST00000551261 IFIT5Q13325 482 aaKnown RBP17.5■□□□□ 0.39
LETMD1-229ENST00000551261 PLEKHM2Q8IWE5 1019 aa17.5■□□□□ 0.39
LETMD1-229ENST00000551261 STAP2Q9UGK3 403 aa17.5■□□□□ 0.39
LETMD1-229ENST00000551261 SALL3Q9BXA9 1300 aa17.49■□□□□ 0.39
LETMD1-229ENST00000551261 MX1P20591 662 aa17.49■□□□□ 0.39
LETMD1-229ENST00000551261 KCNQ4P56696 695 aa17.49■□□□□ 0.39
LETMD1-229ENST00000551261 SUSD4Q5VX71 490 aa17.49■□□□□ 0.39
LETMD1-229ENST00000551261 USPL1Q5W0Q7 1092 aa17.49■□□□□ 0.39
LETMD1-229ENST00000551261 SETDB2Q96T68 719 aa17.49■□□□□ 0.39
LETMD1-229ENST00000551261 GPR108Q9NPR9 543 aa17.49■□□□□ 0.39
LETMD1-229ENST00000551261 TSHZ2Q9NRE2 1034 aa17.49■□□□□ 0.39
LETMD1-229ENST00000551261 QSER1Q2KHR3 1735 aa17.49■□□□□ 0.39
LETMD1-229ENST00000551261 DDX60Q8IY21 1712 aaKnown RBP17.49■□□□□ 0.39
LETMD1-229ENST00000551261 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.48■□□□□ 0.39
LETMD1-229ENST00000551261 TTC22Q5TAA0 569 aa17.48■□□□□ 0.39
LETMD1-229ENST00000551261 SKAP1Q86WV1 359 aa17.48■□□□□ 0.39
LETMD1-229ENST00000551261 CHMP3Q9Y3E7 222 aa17.48■□□□□ 0.39
LETMD1-229ENST00000551261 ANKRD18BA2A2Z9 1011 aa17.47■□□□□ 0.39
LETMD1-229ENST00000551261 APBB1O00213 710 aa17.47■□□□□ 0.39
LETMD1-229ENST00000551261 ERC2O15083 957 aa17.47■□□□□ 0.39
LETMD1-229ENST00000551261 PDE1AP54750 535 aa17.47■□□□□ 0.39
LETMD1-229ENST00000551261 SF3B2Q13435 895 aaKnown RBP17.47■□□□□ 0.39
LETMD1-229ENST00000551261 CCDC152Q4G0S7 254 aa17.47■□□□□ 0.39
LETMD1-229ENST00000551261 TTLL11Q8NHH1 800 aa17.47■□□□□ 0.39
LETMD1-229ENST00000551261 BCL2L12Q9HB09 334 aa17.47■□□□□ 0.39
LETMD1-229ENST00000551261 EYA2O00167 538 aa17.46■□□□□ 0.39
LETMD1-229ENST00000551261 C8orf34Q49A92 452 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms