RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 ADAMTS2O95450 1211 aa17.62■□□□□ 0.41
SCN8A-207ENST00000551216 CYP19A1P11511 503 aaPredicted RBP17.62■□□□□ 0.41
SCN8A-207ENST00000551216 MCM2P49736 904 aa17.62■□□□□ 0.41
SCN8A-207ENST00000551216 FOXO4P98177 505 aa17.62■□□□□ 0.41
SCN8A-207ENST00000551216 PLA2G12BQ9BX93 195 aa17.62■□□□□ 0.41
SCN8A-207ENST00000551216 GPR108Q9NPR9 543 aa17.62■□□□□ 0.41
SCN8A-207ENST00000551216 MAP3K15Q6ZN16 1313 aa17.62■□□□□ 0.41
SCN8A-207ENST00000551216 ERVV-1B6SEH8 477 aa17.61■□□□□ 0.41
SCN8A-207ENST00000551216 DDIT3P35638 169 aa17.61■□□□□ 0.41
SCN8A-207ENST00000551216 IL6STP40189 918 aaPredicted RBP17.61■□□□□ 0.41
SCN8A-207ENST00000551216 GIGYF2Q6Y7W6 1299 aaKnown RBP17.61■□□□□ 0.41
SCN8A-207ENST00000551216 UNC5CLQ8IV45 518 aa17.61■□□□□ 0.41
SCN8A-207ENST00000551216 EAF2Q96CJ1 260 aaPredicted RBP17.61■□□□□ 0.41
SCN8A-207ENST00000551216 RBM42Q9BTD8 480 aaKnown RBP17.61■□□□□ 0.41
SCN8A-207ENST00000551216 SLKQ9H2G2 1235 aaPredicted RBP17.61■□□□□ 0.41
SCN8A-207ENST00000551216 JCADQ9P266 1359 aa17.61■□□□□ 0.41
SCN8A-207ENST00000551216 SGSM2O43147 1006 aa17.61■□□□□ 0.41
SCN8A-207ENST00000551216 ZBTB3Q9H5J0 574 aa17.61■□□□□ 0.41
SCN8A-207ENST00000551216 RFX7Q2KHR2 1363 aa17.6■□□□□ 0.41
SCN8A-207ENST00000551216 CIAO1O76071 339 aa17.6■□□□□ 0.41
SCN8A-207ENST00000551216 PCCAP05165 728 aaPredicted RBP17.6■□□□□ 0.41
SCN8A-207ENST00000551216 LMBR1LQ6UX01 489 aa17.6■□□□□ 0.41
SCN8A-207ENST00000551216 RREB1Q92766 1687 aa17.59■□□□□ 0.41
SCN8A-207ENST00000551216 RAD50Q92878 1312 aa17.59■□□□□ 0.41
SCN8A-207ENST00000551216 CDHR2Q9BYE9 1310 aa17.59■□□□□ 0.41
SCN8A-207ENST00000551216 ANO2Q9NQ90 1003 aa17.59■□□□□ 0.41
SCN8A-207ENST00000551216 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.59■□□□□ 0.41
SCN8A-207ENST00000551216 KAT6BQ8WYB5 2073 aa17.59■□□□□ 0.41
SCN8A-207ENST00000551216 IL15P40933 162 aaPredicted RBP17.58■□□□□ 0.41
SCN8A-207ENST00000551216 PRIM1P49642 420 aaKnown RBP17.58■□□□□ 0.41
SCN8A-207ENST00000551216 ZBTB38Q8NAP3 1195 aaPredicted RBP17.58■□□□□ 0.41
SCN8A-207ENST00000551216 SNRKQ9NRH2 765 aa17.58■□□□□ 0.41
SCN8A-207ENST00000551216 ATP5JP18859 108 aa17.58■□□□□ 0.4
SCN8A-207ENST00000551216 HSPA4P34932 840 aa17.58■□□□□ 0.4
SCN8A-207ENST00000551216 TNNI3KQ59H18 835 aa17.58■□□□□ 0.4
SCN8A-207ENST00000551216 KIAA1211Q6ZU35 1233 aa17.58■□□□□ 0.4
SCN8A-207ENST00000551216 SMARCC1Q92922 1105 aaPredicted RBP17.58■□□□□ 0.4
SCN8A-207ENST00000551216 DIAPH3Q9NSV4 1193 aa17.58■□□□□ 0.4
SCN8A-207ENST00000551216 FPGT-TNNI3KV9GXZ4 949 aa17.58■□□□□ 0.4
SCN8A-207ENST00000551216 SPATA31A6Q5VVP1 1343 aa17.57■□□□□ 0.4
SCN8A-207ENST00000551216 HSP90AA1P07900 732 aaKnown RBP17.57■□□□□ 0.4
SCN8A-207ENST00000551216 PIP4K2BP78356 416 aa17.57■□□□□ 0.4
SCN8A-207ENST00000551216 VPS72Q15906 364 aa17.57■□□□□ 0.4
SCN8A-207ENST00000551216 SIL1Q9H173 461 aa17.57■□□□□ 0.4
SCN8A-207ENST00000551216 NUP98P52948 1817 aa17.56■□□□□ 0.4
SCN8A-207ENST00000551216 UBAP1LF5GYI3 381 aa17.56■□□□□ 0.4
SCN8A-207ENST00000551216 AK7Q96M32 723 aa17.56■□□□□ 0.4
SCN8A-207ENST00000551216 SLC4A9Q96Q91 983 aa17.56■□□□□ 0.4
SCN8A-207ENST00000551216 CWC22Q9HCG8 908 aaKnown RBP17.56■□□□□ 0.4
SCN8A-207ENST00000551216 NUTM2BA6NNL0 878 aaPredicted RBP17.55■□□□□ 0.4
SCN8A-207ENST00000551216 NUTM2EB1AL46 878 aaPredicted RBP17.55■□□□□ 0.4
SCN8A-207ENST00000551216 NUTM2AQ8IVF1 878 aaPredicted RBP17.55■□□□□ 0.4
SCN8A-207ENST00000551216 MARCH10Q8NA82 808 aaPredicted RBP17.55■□□□□ 0.4
SCN8A-207ENST00000551216 SYTL4Q96C24 671 aaPredicted RBP17.55■□□□□ 0.4
SCN8A-207ENST00000551216 MYH3P11055 1940 aa17.54■□□□□ 0.4
SCN8A-207ENST00000551216 EYA2O00167 538 aa17.54■□□□□ 0.4
SCN8A-207ENST00000551216 CD2BP2O95400 341 aaKnown RBP17.54■□□□□ 0.4
SCN8A-207ENST00000551216 CSF1RP07333 972 aa17.54■□□□□ 0.4
SCN8A-207ENST00000551216 FNBP4Q8N3X1 1017 aaPredicted RBP17.54■□□□□ 0.4
SCN8A-207ENST00000551216 KLHDC4Q8TBB5 520 aa17.54■□□□□ 0.4
SCN8A-207ENST00000551216 CCDC8Q9H0W5 538 aaPredicted RBP17.54■□□□□ 0.4
SCN8A-207ENST00000551216 SPEF2Q9C093 1822 aa17.54■□□□□ 0.4
SCN8A-207ENST00000551216 RGL2O15211 777 aa17.54■□□□□ 0.4
SCN8A-207ENST00000551216 TFCP2Q12800 502 aa17.54■□□□□ 0.4
SCN8A-207ENST00000551216 LSG1Q9H089 658 aaKnown RBP17.54■□□□□ 0.4
SCN8A-207ENST00000551216 BCL9LQ86UU0 1499 aa17.53■□□□□ 0.4
SCN8A-207ENST00000551216 FRAT2O75474 233 aaPredicted RBP17.53■□□□□ 0.4
SCN8A-207ENST00000551216 CCDC57Q2TAC2 916 aa17.53■□□□□ 0.4
SCN8A-207ENST00000551216 ATG9AQ7Z3C6 839 aa17.53■□□□□ 0.4
SCN8A-207ENST00000551216 NLRP10Q86W26 655 aa17.53■□□□□ 0.4
SCN8A-207ENST00000551216 DBNLQ9UJU6 430 aaKnown RBP17.53■□□□□ 0.4
SCN8A-207ENST00000551216 EIF5P55010 431 aaKnown RBP17.52■□□□□ 0.4
SCN8A-207ENST00000551216 JARID2Q92833 1246 aaPredicted RBP17.52■□□□□ 0.4
SCN8A-207ENST00000551216 CCDC87Q9NVE4 849 aa17.52■□□□□ 0.4
SCN8A-207ENST00000551216 ZBTB1Q9Y2K1 713 aa17.52■□□□□ 0.4
SCN8A-207ENST00000551216 LOC102724428A0A0B4J2F2 783 aa17.51■□□□□ 0.39
SCN8A-207ENST00000551216 MAP4K4O95819 1239 aaPredicted RBP17.51■□□□□ 0.39
SCN8A-207ENST00000551216 HSP90B1P14625 803 aaKnown RBP17.51■□□□□ 0.39
SCN8A-207ENST00000551216 PTMSP20962 102 aa17.51■□□□□ 0.39
SCN8A-207ENST00000551216 SIK1P57059 783 aa17.51■□□□□ 0.39
SCN8A-207ENST00000551216 CWC27Q6UX04 472 aaKnown RBP17.51■□□□□ 0.39
SCN8A-207ENST00000551216 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.51■□□□□ 0.39
SCN8A-207ENST00000551216 KCNB2Q92953 911 aa17.51■□□□□ 0.39
SCN8A-207ENST00000551216 AKAP2Q9Y2D5 859 aa17.51■□□□□ 0.39
SCN8A-207ENST00000551216 CHMP3Q9Y3E7 222 aa17.51■□□□□ 0.39
SCN8A-207ENST00000551216 CCDC9Q9Y3X0 531 aaKnown RBP17.51■□□□□ 0.39
SCN8A-207ENST00000551216 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.51■□□□□ 0.39
SCN8A-207ENST00000551216 NEK4P51957 841 aa17.5■□□□□ 0.39
SCN8A-207ENST00000551216 RAB3GAP1Q15042 981 aa17.5■□□□□ 0.39
SCN8A-207ENST00000551216 DZIP3Q86Y13 1208 aaKnown RBP17.5■□□□□ 0.39
SCN8A-207ENST00000551216 HAUS7Q99871 368 aa17.5■□□□□ 0.39
SCN8A-207ENST00000551216 ZNF330Q9Y3S2 320 aaPredicted RBP17.5■□□□□ 0.39
SCN8A-207ENST00000551216 COL5A3P25940 1745 aaPredicted RBP17.5■□□□□ 0.39
SCN8A-207ENST00000551216 NUCB2P80303 420 aa17.5■□□□□ 0.39
SCN8A-207ENST00000551216 ZNF34Q8IZ26 560 aa17.5■□□□□ 0.39
SCN8A-207ENST00000551216 NGLY1Q96IV0 654 aa17.5■□□□□ 0.39
SCN8A-207ENST00000551216 TLR7Q9NYK1 1049 aaKnown RBP17.5■□□□□ 0.39
SCN8A-207ENST00000551216 ZNF609O15014 1411 aa17.49■□□□□ 0.39
SCN8A-207ENST00000551216 PALLDQ8WX93 1383 aa17.49■□□□□ 0.39
SCN8A-207ENST00000551216 ATP6V1AP38606 617 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms