RNA–Protein interactions for RNA: ENST00000549913.6

RPH3A-217, Transcript of rabphilin 3A, humanhuman

TSL 1 (best)

Gene RPH3A, Length 5,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-217ENST00000549913 TMC6Q7Z403 805 aa13.06□□□□□ -0.32
RPH3A-217ENST00000549913 CCDC82Q8N4S0 544 aa13.06□□□□□ -0.32
RPH3A-217ENST00000549913 TSPYL6Q8N831 410 aa13.06□□□□□ -0.32
RPH3A-217ENST00000549913 CNNM3Q8NE01 707 aa13.06□□□□□ -0.32
RPH3A-217ENST00000549913 MKNK2Q9HBH9 465 aa13.06□□□□□ -0.32
RPH3A-217ENST00000549913 SNRKQ9NRH2 765 aa13.06□□□□□ -0.32
RPH3A-217ENST00000549913 USP16Q9Y5T5 823 aa13.06□□□□□ -0.32
RPH3A-217ENST00000549913 NPATQ14207 1427 aa13.05□□□□□ -0.32
RPH3A-217ENST00000549913 KLHL10Q6JEL2 608 aa13.05□□□□□ -0.32
RPH3A-217ENST00000549913 ZRANB1Q9UGI0 708 aa13.05□□□□□ -0.32
RPH3A-217ENST00000549913 RANBP6O60518 1105 aaKnown RBP13.05□□□□□ -0.32
RPH3A-217ENST00000549913 KIF4BQ2VIQ3 1234 aa13.05□□□□□ -0.32
RPH3A-217ENST00000549913 PLEKHM2Q8IWE5 1019 aa13.05□□□□□ -0.32
RPH3A-217ENST00000549913 NECAB1Q8N987 351 aa13.05□□□□□ -0.32
RPH3A-217ENST00000549913 A0A1W2PP64 1363 aa13.05□□□□□ -0.32
RPH3A-217ENST00000549913 FLT4P35916 1363 aa13.05□□□□□ -0.32
RPH3A-217ENST00000549913 BIN1O00499 593 aa13.05□□□□□ -0.32
RPH3A-217ENST00000549913 CEP135Q66GS9 1140 aa13.05□□□□□ -0.32
RPH3A-217ENST00000549913 FAM200AQ8TCP9 573 aa13.05□□□□□ -0.32
RPH3A-217ENST00000549913 UBE2Q2Q8WVN8 375 aa13.05□□□□□ -0.32
RPH3A-217ENST00000549913 ORC3Q9UBD5 711 aaPredicted RBP13.05□□□□□ -0.32
RPH3A-217ENST00000549913 GRM8O00222 908 aa13.04□□□□□ -0.32
RPH3A-217ENST00000549913 SSRP1Q08945 709 aaKnown RBP13.04□□□□□ -0.32
RPH3A-217ENST00000549913 SNW1Q13573 536 aaKnown RBP13.04□□□□□ -0.32
RPH3A-217ENST00000549913 MTHFSDQ2M296 383 aaKnown RBP13.04□□□□□ -0.32
RPH3A-217ENST00000549913 KSR2Q6VAB6 950 aa13.04□□□□□ -0.32
RPH3A-217ENST00000549913 ZPR1O75312 459 aa13.04□□□□□ -0.32
RPH3A-217ENST00000549913 F13A1P00488 732 aa13.04□□□□□ -0.32
RPH3A-217ENST00000549913 POLR3DP05423 398 aaPredicted RBP13.04□□□□□ -0.32
RPH3A-217ENST00000549913 IARSP41252 1262 aaKnown RBP13.04□□□□□ -0.32
RPH3A-217ENST00000549913 RBM25P49756 843 aaKnown RBP13.04□□□□□ -0.32
RPH3A-217ENST00000549913 CEP85Q6P2H3 762 aa13.04□□□□□ -0.32
RPH3A-217ENST00000549913 ZNF397Q8NF99 534 aaPredicted RBP13.04□□□□□ -0.32
RPH3A-217ENST00000549913 PHACTR3Q96KR7 559 aa13.04□□□□□ -0.32
RPH3A-217ENST00000549913 CRACR2AQ9BSW2 395 aa13.04□□□□□ -0.32
RPH3A-217ENST00000549913 AKAP4Q5JQC9 854 aa13.04□□□□□ -0.32
RPH3A-217ENST00000549913 CADPS2Q86UW7 1296 aa13.04□□□□□ -0.32
RPH3A-217ENST00000549913 DZIP1Q86YF9 867 aaKnown RBP13.04□□□□□ -0.32
RPH3A-217ENST00000549913 EXOC5O00471 708 aa13.03□□□□□ -0.32
RPH3A-217ENST00000549913 SEC63Q9UGP8 760 aaKnown RBP13.03□□□□□ -0.32
RPH3A-217ENST00000549913 ZMYM4Q5VZL5 1548 aa13.03□□□□□ -0.32
RPH3A-217ENST00000549913 DDX46Q7L014 1031 aaKnown RBP13.03□□□□□ -0.32
RPH3A-217ENST00000549913 ZGPATQ8N5A5 531 aaKnown RBP13.03□□□□□ -0.32
RPH3A-217ENST00000549913 XAGE3Q8WTP9 111 aa13.03□□□□□ -0.32
RPH3A-217ENST00000549913 USP26Q9BXU7 913 aa13.03□□□□□ -0.32
RPH3A-217ENST00000549913 HMGB2P26583 209 aaKnown RBP13.03□□□□□ -0.32
RPH3A-217ENST00000549913 JAKMIP3Q5VZ66 844 aa13.03□□□□□ -0.32
RPH3A-217ENST00000549913 NCOA7Q8NI08 942 aa13.03□□□□□ -0.32
RPH3A-217ENST00000549913 BRF1Q92994 677 aa13.03□□□□□ -0.32
RPH3A-217ENST00000549913 ADGRL2O95490 1459 aa13.03□□□□□ -0.32
RPH3A-217ENST00000549913 HAND2P61296 217 aa13.03□□□□□ -0.32
RPH3A-217ENST00000549913 COPS6Q7L5N1 327 aa13.03□□□□□ -0.32
RPH3A-217ENST00000549913 INTS4Q96HW7 963 aaKnown RBP13.03□□□□□ -0.32
RPH3A-217ENST00000549913 CENPHQ9H3R5 247 aa13.03□□□□□ -0.32
RPH3A-217ENST00000549913 RBM8AQ9Y5S9 174 aaKnown RBP13.03□□□□□ -0.32
RPH3A-217ENST00000549913 TEX14Q8IWB6 1497 aa13.03□□□□□ -0.32
RPH3A-217ENST00000549913 ANO6Q4KMQ2 910 aa13.02□□□□□ -0.32
RPH3A-217ENST00000549913 CCDC150Q8NCX0 1101 aa13.02□□□□□ -0.32
RPH3A-217ENST00000549913 CCDC171Q6TFL3 1326 aa13.02□□□□□ -0.32
RPH3A-217ENST00000549913 ABCC1P33527 1531 aa13.02□□□□□ -0.32
RPH3A-217ENST00000549913 INSRP06213 1382 aa13.02□□□□□ -0.32
RPH3A-217ENST00000549913 CHRNA2Q15822 529 aa13.02□□□□□ -0.32
RPH3A-217ENST00000549913 TMEM132AQ24JP5 1023 aa13.02□□□□□ -0.32
RPH3A-217ENST00000549913 CCDC186Q7Z3E2 898 aa13.02□□□□□ -0.32
RPH3A-217ENST00000549913 SPDYE4A6NLX3 237 aa13.02□□□□□ -0.33
RPH3A-217ENST00000549913 LINS1Q8NG48 757 aa13.02□□□□□ -0.33
RPH3A-217ENST00000549913 JARID2Q92833 1246 aaPredicted RBP13.02□□□□□ -0.33
RPH3A-217ENST00000549913 ZBTB7BO15156 539 aaPredicted RBP13.02□□□□□ -0.33
RPH3A-217ENST00000549913 DNM1Q05193 864 aaKnown RBP13.02□□□□□ -0.33
RPH3A-217ENST00000549913 MAP9Q49MG5 647 aa13.02□□□□□ -0.33
RPH3A-217ENST00000549913 GOLGA6L9A6NEM1 432 aa13.01□□□□□ -0.33
RPH3A-217ENST00000549913 SPA17Q15506 151 aa13.01□□□□□ -0.33
RPH3A-217ENST00000549913 TMEM67Q5HYA8 995 aa13.01□□□□□ -0.33
RPH3A-217ENST00000549913 CATIPQ7Z7H3 387 aa13.01□□□□□ -0.33
RPH3A-217ENST00000549913 CALCOCO1Q9P1Z2 691 aa13.01□□□□□ -0.33
RPH3A-217ENST00000549913 ZFYP08048 801 aaPredicted RBP13.01□□□□□ -0.33
RPH3A-217ENST00000549913 ZNF76P36508 570 aa13.01□□□□□ -0.33
RPH3A-217ENST00000549913 MICU3Q86XE3 530 aa13.01□□□□□ -0.33
RPH3A-217ENST00000549913 ZNF444Q8N0Y2 327 aaPredicted RBP13.01□□□□□ -0.33
RPH3A-217ENST00000549913 TTC12Q9H892 705 aaPredicted RBP13.01□□□□□ -0.33
RPH3A-217ENST00000549913 DACT1Q9NYF0 836 aa13.01□□□□□ -0.33
RPH3A-217ENST00000549913 POLR3GO15318 223 aaPredicted RBP13.01□□□□□ -0.33
RPH3A-217ENST00000549913 CDC5LQ99459 802 aaKnown RBP13.01□□□□□ -0.33
RPH3A-217ENST00000549913 MCM3P25205 808 aa13.01□□□□□ -0.33
RPH3A-217ENST00000549913 BMS1Q14692 1282 aaKnown RBP13.01□□□□□ -0.33
RPH3A-217ENST00000549913 KRT24Q2M2I5 525 aa13.01□□□□□ -0.33
RPH3A-217ENST00000549913 CPLX3Q8WVH0 158 aa13.01□□□□□ -0.33
RPH3A-217ENST00000549913 TAF4BQ92750 862 aa13.01□□□□□ -0.33
RPH3A-217ENST00000549913 CCDC194A0A1B0GVG4 234 aa13□□□□□ -0.33
RPH3A-217ENST00000549913 ZMYND15Q9H091 742 aa13□□□□□ -0.33
RPH3A-217ENST00000549913 TTC41PQ6P2S7 1318 aa13□□□□□ -0.33
RPH3A-217ENST00000549913 USP8P40818 1118 aa13□□□□□ -0.33
RPH3A-217ENST00000549913 METAP2P50579 478 aaKnown RBP eCLIP13□□□□□ -0.33
RPH3A-217ENST00000549913 PIP4K2BP78356 416 aa13□□□□□ -0.33
RPH3A-217ENST00000549913 ANKIB1Q9P2G1 1089 aa13□□□□□ -0.33
RPH3A-217ENST00000549913 UQCRFS1P1P0C7P4 283 aa13□□□□□ -0.33
RPH3A-217ENST00000549913 SKILP12757 684 aa13□□□□□ -0.33
RPH3A-217ENST00000549913 CCDC102BQ68D86 513 aa13□□□□□ -0.33
RPH3A-217ENST00000549913 TCEANC2Q96MN5 208 aa13□□□□□ -0.33
RPH3A-217ENST00000549913 RAB34Q9BZG1 259 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms