RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 CWC25Q9NXE8 425 aaPredicted RBP21.65■■□□□ 1.06
KRT4-201ENST00000548097 NBPF7P0C2Y1 421 aaPredicted RBP21.64■■□□□ 1.06
KRT4-201ENST00000548097 CCDC24Q8N4L8 307 aa21.64■■□□□ 1.06
KRT4-201ENST00000548097 SETDB2Q96T68 719 aa21.64■■□□□ 1.06
KRT4-201ENST00000548097 USP44Q9H0E7 712 aa21.64■■□□□ 1.06
KRT4-201ENST00000548097 ALDH1L1O75891 902 aa21.64■■□□□ 1.05
KRT4-201ENST00000548097 CCDC191Q8NCU4 936 aa21.64■■□□□ 1.05
KRT4-201ENST00000548097 FAM89AQ96GI7 184 aa21.64■■□□□ 1.05
KRT4-201ENST00000548097 ZBTB7BO15156 539 aaPredicted RBP21.63■■□□□ 1.05
KRT4-201ENST00000548097 DDR1Q08345 913 aa21.63■■□□□ 1.05
KRT4-201ENST00000548097 NUTM1Q86Y26 1132 aa21.63■■□□□ 1.05
KRT4-201ENST00000548097 C1orf115Q9H7X2 142 aa21.63■■□□□ 1.05
KRT4-201ENST00000548097 C9orf78Q9NZ63 289 aaPredicted RBP21.63■■□□□ 1.05
KRT4-201ENST00000548097 CASZ1Q86V15 1759 aa21.62■■□□□ 1.05
KRT4-201ENST00000548097 TM4SF1P30408 202 aa21.62■■□□□ 1.05
KRT4-201ENST00000548097 UBE3BQ7Z3V4 1068 aa21.62■■□□□ 1.05
KRT4-201ENST00000548097 NLGN1Q8N2Q7 840 aa21.62■■□□□ 1.05
KRT4-201ENST00000548097 TRMT112Q9UI30 125 aaKnown RBP21.62■■□□□ 1.05
KRT4-201ENST00000548097 TRIM28Q13263 835 aaKnown RBP21.62■■□□□ 1.05
KRT4-201ENST00000548097 DDX19BQ9UMR2 479 aa21.62■■□□□ 1.05
KRT4-201ENST00000548097 ATF5Q9Y2D1 282 aaPredicted RBP21.62■■□□□ 1.05
KRT4-201ENST00000548097 GRM8O00222 908 aa21.61■■□□□ 1.05
KRT4-201ENST00000548097 MMP10P09238 476 aa21.61■■□□□ 1.05
KRT4-201ENST00000548097 RGL2O15211 777 aa21.6■■□□□ 1.05
KRT4-201ENST00000548097 NTSR2O95665 410 aa21.6■■□□□ 1.05
KRT4-201ENST00000548097 NEFLP07196 543 aa21.6■■□□□ 1.05
KRT4-201ENST00000548097 POLRMTO00411 1230 aaKnown RBP21.59■■□□□ 1.05
KRT4-201ENST00000548097 PARP10Q53GL7 1025 aa21.59■■□□□ 1.05
KRT4-201ENST00000548097 NBPF5PQ86XG9 351 aaPredicted RBP21.59■■□□□ 1.05
KRT4-201ENST00000548097 UTP14AQ9BVJ6 771 aaKnown RBP21.59■■□□□ 1.05
KRT4-201ENST00000548097 SERPINB2P05120 415 aa21.59■■□□□ 1.05
KRT4-201ENST00000548097 CARMIL3Q8ND23 1372 aa21.59■■□□□ 1.05
KRT4-201ENST00000548097 COL24A1Q17RW2 1714 aa21.58■■□□□ 1.05
KRT4-201ENST00000548097 H7C1W4 665 aa21.58■■□□□ 1.05
KRT4-201ENST00000548097 ERFEQ4G0M1 354 aa21.58■■□□□ 1.05
KRT4-201ENST00000548097 PPP1R42Q7Z4L9 355 aa21.58■■□□□ 1.05
KRT4-201ENST00000548097 ZBTB38Q8NAP3 1195 aaPredicted RBP21.58■■□□□ 1.05
KRT4-201ENST00000548097 CASP7P55210 303 aa21.57■■□□□ 1.04
KRT4-201ENST00000548097 SUCLG2Q96I99 432 aa21.57■■□□□ 1.04
KRT4-201ENST00000548097 NPHP1O15259 732 aa21.57■■□□□ 1.04
KRT4-201ENST00000548097 PCCAP05165 728 aaPredicted RBP21.57■■□□□ 1.04
KRT4-201ENST00000548097 UBTFL1P0CB47 393 aaPredicted RBP21.57■■□□□ 1.04
KRT4-201ENST00000548097 SLC16A10Q8TF71 515 aa21.57■■□□□ 1.04
KRT4-201ENST00000548097 HCLS1P14317 486 aaPredicted RBP21.56■■□□□ 1.04
KRT4-201ENST00000548097 GTF2E1P29083 439 aaPredicted RBP21.56■■□□□ 1.04
KRT4-201ENST00000548097 ZBTB40Q9NUA8 1239 aa21.56■■□□□ 1.04
KRT4-201ENST00000548097 LRRFIP2Q9Y608 721 aaKnown RBP21.56■■□□□ 1.04
KRT4-201ENST00000548097 ABCC12Q96J65 1359 aa21.55■■□□□ 1.04
KRT4-201ENST00000548097 UTYO14607 1347 aa21.55■■□□□ 1.04
KRT4-201ENST00000548097 EPHA10Q5JZY3 1008 aa21.55■■□□□ 1.04
KRT4-201ENST00000548097 PRR5LQ6MZQ0 368 aa21.55■■□□□ 1.04
KRT4-201ENST00000548097 KAZALD1Q96I82 304 aa21.55■■□□□ 1.04
KRT4-201ENST00000548097 PARP3Q9Y6F1 533 aa21.55■■□□□ 1.04
KRT4-201ENST00000548097 SH3TC1Q8TE82 1336 aa21.55■■□□□ 1.04
KRT4-201ENST00000548097 TPTE2Q6XPS3 522 aa21.55■■□□□ 1.04
KRT4-201ENST00000548097 MTFR1LQ9H019 292 aa21.55■■□□□ 1.04
KRT4-201ENST00000548097 IRS4O14654 1257 aaPredicted RBP21.54■■□□□ 1.04
KRT4-201ENST00000548097 GNAI3P08754 354 aa21.54■■□□□ 1.04
KRT4-201ENST00000548097 CNBD1Q8NA66 436 aa21.54■■□□□ 1.04
KRT4-201ENST00000548097 CCDC85AQ96PX6 553 aaPredicted RBP21.53■■□□□ 1.04
KRT4-201ENST00000548097 C3orf67Q6ZVT6 689 aa21.52■■□□□ 1.04
KRT4-201ENST00000548097 NYXQ9GZU5 481 aa21.52■■□□□ 1.04
KRT4-201ENST00000548097 BICC1Q9H694 974 aaKnown RBP21.52■■□□□ 1.04
KRT4-201ENST00000548097 GNAI2P04899 355 aa21.52■■□□□ 1.04
KRT4-201ENST00000548097 DDX60Q8IY21 1712 aaKnown RBP21.51■■□□□ 1.03
KRT4-201ENST00000548097 PCDHB15Q9Y5E8 787 aa21.51■■□□□ 1.03
KRT4-201ENST00000548097 FOXO4P98177 505 aa21.5■■□□□ 1.03
KRT4-201ENST00000548097 CDHR2Q9BYE9 1310 aa21.5■■□□□ 1.03
KRT4-201ENST00000548097 TNRC6CQ9HCJ0 1690 aaKnown RBP21.5■■□□□ 1.03
KRT4-201ENST00000548097 IBTKQ9P2D0 1353 aaPredicted RBP21.49■■□□□ 1.03
KRT4-201ENST00000548097 ANKRD44Q8N8A2 993 aa21.49■■□□□ 1.03
KRT4-201ENST00000548097 NRXN2Q9P2S2 1712 aa21.49■■□□□ 1.03
KRT4-201ENST00000548097 PTGER2P43116 358 aa21.48■■□□□ 1.03
KRT4-201ENST00000548097 ST5P78524 1137 aa21.48■■□□□ 1.03
KRT4-201ENST00000548097 LMBR1LQ6UX01 489 aa21.48■■□□□ 1.03
KRT4-201ENST00000548097 CHMP3Q9Y3E7 222 aa21.48■■□□□ 1.03
KRT4-201ENST00000548097 PDE8AO60658 829 aa21.47■■□□□ 1.03
KRT4-201ENST00000548097 SGIP1Q9BQI5 828 aa21.47■■□□□ 1.03
KRT4-201ENST00000548097 SRCAPQ6ZRS2 3230 aa21.47■■□□□ 1.03
KRT4-201ENST00000548097 PNMA6EA0A0J9YXQ4 647 aa21.46■■□□□ 1.03
KRT4-201ENST00000548097 POLD1P28340 1107 aa21.46■■□□□ 1.03
KRT4-201ENST00000548097 CEP85Q6P2H3 762 aa21.46■■□□□ 1.03
KRT4-201ENST00000548097 CHMP4BQ9H444 224 aaKnown RBP21.46■■□□□ 1.03
KRT4-201ENST00000548097 CTSWP56202 376 aa21.45■■□□□ 1.03
KRT4-201ENST00000548097 SLC10A5Q5PT55 438 aa21.45■■□□□ 1.03
KRT4-201ENST00000548097 SIRT2Q8IXJ6 389 aa21.45■■□□□ 1.03
KRT4-201ENST00000548097 ANKRD31Q8N7Z5 1873 aa21.45■■□□□ 1.03
KRT4-201ENST00000548097 LAMB2P55268 1798 aa21.45■■□□□ 1.02
KRT4-201ENST00000548097 TTLL11Q8NHH1 800 aa21.45■■□□□ 1.02
KRT4-201ENST00000548097 PLA2G12BQ9BX93 195 aa21.45■■□□□ 1.02
KRT4-201ENST00000548097 GTF3C3Q9Y5Q9 886 aa21.45■■□□□ 1.02
KRT4-201ENST00000548097 FAM161AQ3B820 660 aa21.44■■□□□ 1.02
KRT4-201ENST00000548097 GREM2Q9H772 168 aa21.44■■□□□ 1.02
KRT4-201ENST00000548097 MYH3P11055 1940 aa21.44■■□□□ 1.02
KRT4-201ENST00000548097 KLHL34Q8N239 644 aa21.43■■□□□ 1.02
KRT4-201ENST00000548097 KLHDC4Q8TBB5 520 aa21.43■■□□□ 1.02
KRT4-201ENST00000548097 NLRP3Q96P20 1036 aa21.43■■□□□ 1.02
KRT4-201ENST00000548097 PPP1R1BQ9UD71 204 aaPredicted RBP21.43■■□□□ 1.02
KRT4-201ENST00000548097 SRGAP3O43295 1099 aa21.43■■□□□ 1.02
KRT4-201ENST00000548097 RABL6Q3YEC7 729 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms