RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 ANKRD13DQ6ZTN6 518 aa15.57■□□□□ 0.08
CPSF7-223ENST00000544669 FMNL2Q96PY5 1086 aa15.57■□□□□ 0.08
CPSF7-223ENST00000544669 RBM27Q9P2N5 1060 aaKnown RBP15.57■□□□□ 0.08
CPSF7-223ENST00000544669 PXDNQ92626 1479 aa15.57■□□□□ 0.08
CPSF7-223ENST00000544669 ATF3P18847 181 aa15.57■□□□□ 0.08
CPSF7-223ENST00000544669 FOXD4L5Q5VV16 416 aaPredicted RBP15.57■□□□□ 0.08
CPSF7-223ENST00000544669 CREB3L3Q68CJ9 461 aa15.57■□□□□ 0.08
CPSF7-223ENST00000544669 PRPF40BQ6NWY9 871 aaKnown RBP15.57■□□□□ 0.08
CPSF7-223ENST00000544669 FOXD4L4Q8WXT5 416 aaPredicted RBP15.57■□□□□ 0.08
CPSF7-223ENST00000544669 FSD1Q9BTV5 496 aa15.57■□□□□ 0.08
CPSF7-223ENST00000544669 IL25Q9H293 177 aa15.57■□□□□ 0.08
CPSF7-223ENST00000544669 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.57■□□□□ 0.08
CPSF7-223ENST00000544669 SASH1O94885 1247 aa15.56■□□□□ 0.08
CPSF7-223ENST00000544669 ATP5JP18859 108 aa15.56■□□□□ 0.08
CPSF7-223ENST00000544669 PROSER3Q2NL68 480 aa15.56■□□□□ 0.08
CPSF7-223ENST00000544669 BLOC1S2Q6QNY1 142 aa15.56■□□□□ 0.08
CPSF7-223ENST00000544669 TRPM3Q9HCF6 1732 aaPredicted RBP15.56■□□□□ 0.08
CPSF7-223ENST00000544669 NLRP2Q9NX02 1062 aa15.56■□□□□ 0.08
CPSF7-223ENST00000544669 ZKSCAN5Q9Y2L8 839 aa15.56■□□□□ 0.08
CPSF7-223ENST00000544669 RBM8AQ9Y5S9 174 aaKnown RBP15.56■□□□□ 0.08
CPSF7-223ENST00000544669 SIPA1L3O60292 1781 aaPredicted RBP15.55■□□□□ 0.08
CPSF7-223ENST00000544669 TPM3P06753 285 aa15.55■□□□□ 0.08
CPSF7-223ENST00000544669 EAF2Q96CJ1 260 aaPredicted RBP15.55■□□□□ 0.08
CPSF7-223ENST00000544669 MRC1P22897 1456 aa15.55■□□□□ 0.08
CPSF7-223ENST00000544669 ADAMTSL3P82987 1691 aa15.55■□□□□ 0.08
CPSF7-223ENST00000544669 GJB2P29033 226 aa15.54■□□□□ 0.08
CPSF7-223ENST00000544669 AIMP1Q12904 312 aaKnown RBP15.54■□□□□ 0.08
CPSF7-223ENST00000544669 AXIN2Q9Y2T1 843 aa15.54■□□□□ 0.08
CPSF7-223ENST00000544669 IGKV5-2P06315 115 aa15.54■□□□□ 0.08
CPSF7-223ENST00000544669 HMGB1P09429 215 aaKnown RBP15.54■□□□□ 0.08
CPSF7-223ENST00000544669 PTH1RQ03431 593 aa15.54■□□□□ 0.08
CPSF7-223ENST00000544669 RABL6Q3YEC7 729 aaPredicted RBP15.54■□□□□ 0.08
CPSF7-223ENST00000544669 KAZALD1Q96I82 304 aa15.54■□□□□ 0.08
CPSF7-223ENST00000544669 PA2G4Q9UQ80 394 aaKnown RBP15.54■□□□□ 0.08
CPSF7-223ENST00000544669 U3KPZ7 1027 aaPredicted RBP15.54■□□□□ 0.08
CPSF7-223ENST00000544669 ELP1O95163 1332 aa15.54■□□□□ 0.08
CPSF7-223ENST00000544669 SLC27A2O14975 620 aa15.53■□□□□ 0.08
CPSF7-223ENST00000544669 KRT85P78386 507 aa15.53■□□□□ 0.08
CPSF7-223ENST00000544669 NMIQ13287 307 aaPredicted RBP15.53■□□□□ 0.08
CPSF7-223ENST00000544669 COPS6Q7L5N1 327 aa15.53■□□□□ 0.08
CPSF7-223ENST00000544669 XAGE3Q8WTP9 111 aa15.53■□□□□ 0.08
CPSF7-223ENST00000544669 SCAND2PQ9GZW5 306 aaPredicted RBP15.53■□□□□ 0.08
CPSF7-223ENST00000544669 PTMAP06454 111 aaKnown RBP15.52■□□□□ 0.08
CPSF7-223ENST00000544669 CSB-PGBD3P0DP91 1061 aa15.52■□□□□ 0.08
CPSF7-223ENST00000544669 LRRFIP1Q32MZ4 808 aaKnown RBP15.52■□□□□ 0.08
CPSF7-223ENST00000544669 USPL1Q5W0Q7 1092 aa15.52■□□□□ 0.08
CPSF7-223ENST00000544669 PLBD2Q8NHP8 589 aa15.52■□□□□ 0.08
CPSF7-223ENST00000544669 GPR108Q9NPR9 543 aa15.52■□□□□ 0.08
CPSF7-223ENST00000544669 KIF3AQ9Y496 699 aa15.52■□□□□ 0.08
CPSF7-223ENST00000544669 JCADQ9P266 1359 aa15.52■□□□□ 0.08
CPSF7-223ENST00000544669 RRP9O43818 475 aaKnown RBP15.52■□□□□ 0.07
CPSF7-223ENST00000544669 RPS6KB1P23443 525 aa15.52■□□□□ 0.07
CPSF7-223ENST00000544669 LARP1BQ659C4 914 aaKnown RBP15.52■□□□□ 0.07
CPSF7-223ENST00000544669 CADPS2Q86UW7 1296 aa15.52■□□□□ 0.07
CPSF7-223ENST00000544669 CCDC83Q8IWF9 413 aa15.52■□□□□ 0.07
CPSF7-223ENST00000544669 NFATC2IPQ8NCF5 419 aa15.52■□□□□ 0.07
CPSF7-223ENST00000544669 MYD88Q99836 296 aa15.52■□□□□ 0.07
CPSF7-223ENST00000544669 NSFL1CQ9UNZ2 370 aaKnown RBP15.52■□□□□ 0.07
CPSF7-223ENST00000544669 MTMR6Q9Y217 621 aa15.52■□□□□ 0.07
CPSF7-223ENST00000544669 MED23Q9ULK4 1368 aa15.52■□□□□ 0.07
CPSF7-223ENST00000544669 RGPD2P0DJD1 1756 aa15.51■□□□□ 0.07
CPSF7-223ENST00000544669 RBM33Q96EV2 1170 aaKnown RBP15.51■□□□□ 0.07
CPSF7-223ENST00000544669 CCDC8Q9H0W5 538 aaPredicted RBP15.51■□□□□ 0.07
CPSF7-223ENST00000544669 CABP4P57796 275 aa15.5■□□□□ 0.07
CPSF7-223ENST00000544669 XPCQ01831 940 aaPredicted RBP15.5■□□□□ 0.07
CPSF7-223ENST00000544669 KIAA2012Q0VF49 1180 aa15.5■□□□□ 0.07
CPSF7-223ENST00000544669 GLIPR1L2Q4G1C9 344 aa15.5■□□□□ 0.07
CPSF7-223ENST00000544669 BOLA2Q9H3K6 86 aa15.5■□□□□ 0.07
CPSF7-223ENST00000544669 ATG3Q9NT62 314 aa15.5■□□□□ 0.07
CPSF7-223ENST00000544669 CNPY2Q9Y2B0 182 aa15.5■□□□□ 0.07
CPSF7-223ENST00000544669 KDM6AO15550 1401 aaPredicted RBP15.5■□□□□ 0.07
CPSF7-223ENST00000544669 CPDO75976 1380 aa15.5■□□□□ 0.07
CPSF7-223ENST00000544669 ZC3H6P61129 1189 aaKnown RBP15.5■□□□□ 0.07
CPSF7-223ENST00000544669 TNNI3KQ59H18 835 aa15.5■□□□□ 0.07
CPSF7-223ENST00000544669 FPGT-TNNI3KV9GXZ4 949 aa15.5■□□□□ 0.07
CPSF7-223ENST00000544669 ALS2Q96Q42 1657 aa15.49■□□□□ 0.07
CPSF7-223ENST00000544669 GADD45BO75293 160 aaPredicted RBP15.49■□□□□ 0.07
CPSF7-223ENST00000544669 CAVIN2O95810 425 aa15.49■□□□□ 0.07
CPSF7-223ENST00000544669 CCDC192P0DO97 292 aa15.49■□□□□ 0.07
CPSF7-223ENST00000544669 MYL6BP14649 208 aa15.49■□□□□ 0.07
CPSF7-223ENST00000544669 ME3Q16798 604 aa15.49■□□□□ 0.07
CPSF7-223ENST00000544669 ADCK5Q3MIX3 580 aa15.49■□□□□ 0.07
CPSF7-223ENST00000544669 ZNF496Q96IT1 587 aaPredicted RBP15.49■□□□□ 0.07
CPSF7-223ENST00000544669 GOLGA6L4A6NEF3 574 aa15.48■□□□□ 0.07
CPSF7-223ENST00000544669 MCMDC2Q4G0Z9 681 aa15.48■□□□□ 0.07
CPSF7-223ENST00000544669 FAM227BQ96M60 508 aa15.48■□□□□ 0.07
CPSF7-223ENST00000544669 HAUS7Q99871 368 aa15.48■□□□□ 0.07
CPSF7-223ENST00000544669 LLPHQ9BRT6 129 aaKnown RBP15.48■□□□□ 0.07
CPSF7-223ENST00000544669 ZSCAN16Q9H4T2 348 aaPredicted RBP15.48■□□□□ 0.07
CPSF7-223ENST00000544669 FBXO3Q9UK99 471 aa15.48■□□□□ 0.07
CPSF7-223ENST00000544669 SCN11AQ9UI33 1791 aa15.48■□□□□ 0.07
CPSF7-223ENST00000544669 TMEM94Q12767 1356 aa15.48■□□□□ 0.07
CPSF7-223ENST00000544669 PRAMEF22A3QJZ6 481 aa15.47■□□□□ 0.07
CPSF7-223ENST00000544669 GOLGA6L6A8MZA4 724 aa15.47■□□□□ 0.07
CPSF7-223ENST00000544669 TAF5LO75529 589 aa15.47■□□□□ 0.07
CPSF7-223ENST00000544669 PTPN12Q05209 780 aaKnown RBP15.47■□□□□ 0.07
CPSF7-223ENST00000544669 HELLSQ9NRZ9 838 aa15.47■□□□□ 0.07
CPSF7-223ENST00000544669 A0A087WZG4 1122 aa15.47■□□□□ 0.07
CPSF7-223ENST00000544669 VPS37CA5D8V6 355 aaPredicted RBP15.47■□□□□ 0.07
CPSF7-223ENST00000544669 ERVV-2B6SEH9 535 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms