RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 KLHDC4Q8TBB5 520 aa16.83■□□□□ 0.28
MSH2-206ENST00000543555 COL15A1P39059 1388 aa16.83■□□□□ 0.28
MSH2-206ENST00000543555 JCADQ9P266 1359 aa16.83■□□□□ 0.28
MSH2-206ENST00000543555 KAT6BQ8WYB5 2073 aa16.82■□□□□ 0.28
MSH2-206ENST00000543555 ERBB4Q15303 1308 aa16.82■□□□□ 0.28
MSH2-206ENST00000543555 ABCA3Q99758 1704 aa16.82■□□□□ 0.28
MSH2-206ENST00000543555 KLHL40Q2TBA0 621 aa16.82■□□□□ 0.28
MSH2-206ENST00000543555 CCDC8Q9H0W5 538 aaPredicted RBP16.82■□□□□ 0.28
MSH2-206ENST00000543555 MRE11P49959 708 aa16.82■□□□□ 0.28
MSH2-206ENST00000543555 PLBD2Q8NHP8 589 aa16.82■□□□□ 0.28
MSH2-206ENST00000543555 ERVV-2B6SEH9 535 aa16.81■□□□□ 0.28
MSH2-206ENST00000543555 COPRSQ9NQ92 184 aa16.81■□□□□ 0.28
MSH2-206ENST00000543555 TLR7Q9NYK1 1049 aaKnown RBP16.81■□□□□ 0.28
MSH2-206ENST00000543555 DDX49Q9Y6V7 483 aaKnown RBP16.81■□□□□ 0.28
MSH2-206ENST00000543555 AFDNP55196 1824 aaKnown RBP16.81■□□□□ 0.28
MSH2-206ENST00000543555 NKX1-1Q15270 411 aaPredicted RBP16.8■□□□□ 0.28
MSH2-206ENST00000543555 RABL6Q3YEC7 729 aaPredicted RBP16.8■□□□□ 0.28
MSH2-206ENST00000543555 UBE3BQ7Z3V4 1068 aa16.8■□□□□ 0.28
MSH2-206ENST00000543555 RASEFQ8IZ41 740 aa16.8■□□□□ 0.28
MSH2-206ENST00000543555 JARID2Q92833 1246 aaPredicted RBP16.8■□□□□ 0.28
MSH2-206ENST00000543555 CARD10Q9BWT7 1032 aa16.8■□□□□ 0.28
MSH2-206ENST00000543555 ATP5J2-PTCD1G3V325 749 aa16.8■□□□□ 0.28
MSH2-206ENST00000543555 PTCD1O75127 700 aaKnown RBP16.8■□□□□ 0.28
MSH2-206ENST00000543555 IL2RBP14784 551 aa16.8■□□□□ 0.28
MSH2-206ENST00000543555 FAM182BQ5T319 152 aa16.8■□□□□ 0.28
MSH2-206ENST00000543555 RTN4Q9NQC3 1192 aaKnown RBP16.8■□□□□ 0.28
MSH2-206ENST00000543555 LMBRD1Q9NUN5 540 aa16.8■□□□□ 0.28
MSH2-206ENST00000543555 NBPF26B4DH59 902 aa16.8■□□□□ 0.28
MSH2-206ENST00000543555 RFX5P48382 616 aaPredicted RBP16.8■□□□□ 0.28
MSH2-206ENST00000543555 NBPF14Q5TI25 921 aa16.8■□□□□ 0.28
MSH2-206ENST00000543555 NBPF10Q6P3W6 841 aaKnown RBP16.8■□□□□ 0.28
MSH2-206ENST00000543555 NBPF15Q8N660 670 aa16.8■□□□□ 0.28
MSH2-206ENST00000543555 GRPEL1Q9HAV7 217 aa16.8■□□□□ 0.28
MSH2-206ENST00000543555 A0A087WZG4 1122 aa16.79■□□□□ 0.28
MSH2-206ENST00000543555 TTC14Q96N46 770 aa16.79■□□□□ 0.28
MSH2-206ENST00000543555 UBR2Q8IWV8 1755 aa16.79■□□□□ 0.28
MSH2-206ENST00000543555 HIP1O00291 1037 aa16.79■□□□□ 0.28
MSH2-206ENST00000543555 FAM98CQ17RN3 349 aaKnown RBP16.79■□□□□ 0.28
MSH2-206ENST00000543555 LRP6O75581 1613 aa16.79■□□□□ 0.28
MSH2-206ENST00000543555 KCPQ6ZWJ8 1503 aa16.78■□□□□ 0.28
MSH2-206ENST00000543555 CASP7P55210 303 aa16.78■□□□□ 0.28
MSH2-206ENST00000543555 PTH1RQ03431 593 aa16.78■□□□□ 0.28
MSH2-206ENST00000543555 PTPN12Q05209 780 aaKnown RBP16.78■□□□□ 0.28
MSH2-206ENST00000543555 PAPPAQ13219 1627 aa16.78■□□□□ 0.28
MSH2-206ENST00000543555 BRD1O95696 1058 aa16.78■□□□□ 0.28
MSH2-206ENST00000543555 PANK2Q9BZ23 570 aa16.78■□□□□ 0.28
MSH2-206ENST00000543555 BOLA2Q9H3K6 86 aa16.78■□□□□ 0.28
MSH2-206ENST00000543555 USP21Q9UK80 565 aa16.78■□□□□ 0.28
MSH2-206ENST00000543555 GAS2L3Q86XJ1 694 aa16.77■□□□□ 0.28
MSH2-206ENST00000543555 SHANK3Q9BYB0 1731 aa16.76■□□□□ 0.27
MSH2-206ENST00000543555 CCDC171Q6TFL3 1326 aa16.76■□□□□ 0.27
MSH2-206ENST00000543555 KCNB2Q92953 911 aa16.76■□□□□ 0.27
MSH2-206ENST00000543555 NMIQ13287 307 aaPredicted RBP16.76■□□□□ 0.27
MSH2-206ENST00000543555 FAM227BQ96M60 508 aa16.76■□□□□ 0.27
MSH2-206ENST00000543555 SNRKQ9NRH2 765 aa16.76■□□□□ 0.27
MSH2-206ENST00000543555 TNS2Q63HR2 1409 aa16.76■□□□□ 0.27
MSH2-206ENST00000543555 AK2P54819 239 aa16.75■□□□□ 0.27
MSH2-206ENST00000543555 TTLL7Q6ZT98 887 aa16.75■□□□□ 0.27
MSH2-206ENST00000543555 SYTL4Q96C24 671 aaPredicted RBP16.75■□□□□ 0.27
MSH2-206ENST00000543555 TNNI3KQ59H18 835 aa16.75■□□□□ 0.27
MSH2-206ENST00000543555 FOXD4L5Q5VV16 416 aaPredicted RBP16.75■□□□□ 0.27
MSH2-206ENST00000543555 PRPF40BQ6NWY9 871 aaKnown RBP16.75■□□□□ 0.27
MSH2-206ENST00000543555 FOXD4L4Q8WXT5 416 aaPredicted RBP16.75■□□□□ 0.27
MSH2-206ENST00000543555 FSD1Q9BTV5 496 aa16.75■□□□□ 0.27
MSH2-206ENST00000543555 FPGT-TNNI3KV9GXZ4 949 aa16.75■□□□□ 0.27
MSH2-206ENST00000543555 H7C1W4 665 aa16.75■□□□□ 0.27
MSH2-206ENST00000543555 PRPF40AO75400 957 aaKnown RBP16.75■□□□□ 0.27
MSH2-206ENST00000543555 CASTP20810 708 aaKnown RBP16.75■□□□□ 0.27
MSH2-206ENST00000543555 TFCP2Q12800 502 aa16.75■□□□□ 0.27
MSH2-206ENST00000543555 NECTIN1Q15223 517 aa16.75■□□□□ 0.27
MSH2-206ENST00000543555 A1BGP04217 495 aa16.74■□□□□ 0.27
MSH2-206ENST00000543555 TM6SF1Q9BZW5 370 aa16.74■□□□□ 0.27
MSH2-206ENST00000543555 DBNLQ9UJU6 430 aaKnown RBP16.74■□□□□ 0.27
MSH2-206ENST00000543555 NUP188Q5SRE5 1749 aa16.74■□□□□ 0.27
MSH2-206ENST00000543555 RUFY3Q7L099 469 aa16.74■□□□□ 0.27
MSH2-206ENST00000543555 LIMCH1Q9UPQ0 1083 aa16.74■□□□□ 0.27
MSH2-206ENST00000543555 AFF2P51816 1311 aa16.73■□□□□ 0.27
MSH2-206ENST00000543555 ATP5JP18859 108 aa16.73■□□□□ 0.27
MSH2-206ENST00000543555 LMBR1LQ6UX01 489 aa16.73■□□□□ 0.27
MSH2-206ENST00000543555 MAP4K1Q92918 833 aa16.73■□□□□ 0.27
MSH2-206ENST00000543555 CHAMP1Q96JM3 812 aa16.73■□□□□ 0.27
MSH2-206ENST00000543555 CWC25Q9NXE8 425 aaPredicted RBP16.73■□□□□ 0.27
MSH2-206ENST00000543555 A0A0D9SFI3 127 aa16.73■□□□□ 0.27
MSH2-206ENST00000543555 FOXO4P98177 505 aa16.73■□□□□ 0.27
MSH2-206ENST00000543555 JAKMIP1Q96N16 626 aaKnown RBP16.73■□□□□ 0.27
MSH2-206ENST00000543555 RBM8AQ9Y5S9 174 aaKnown RBP16.73■□□□□ 0.27
MSH2-206ENST00000543555 CPA1P15085 419 aa16.72■□□□□ 0.27
MSH2-206ENST00000543555 ADCK5Q3MIX3 580 aa16.72■□□□□ 0.27
MSH2-206ENST00000543555 ZSWIM6Q9HCJ5 1215 aa16.72■□□□□ 0.27
MSH2-206ENST00000543555 CAVIN1Q6NZI2 390 aaKnown RBP16.72■□□□□ 0.27
MSH2-206ENST00000543555 ACSBG1Q96GR2 724 aa16.72■□□□□ 0.27
MSH2-206ENST00000543555 MED23Q9ULK4 1368 aa16.72■□□□□ 0.27
MSH2-206ENST00000543555 SPATA31A1Q5TZJ5 1347 aa16.72■□□□□ 0.27
MSH2-206ENST00000543555 ZKSCAN1P17029 563 aaPredicted RBP16.72■□□□□ 0.27
MSH2-206ENST00000543555 NCLP19338 710 aaKnown RBP16.72■□□□□ 0.27
MSH2-206ENST00000543555 VPS53Q5VIR6 699 aa16.72■□□□□ 0.27
MSH2-206ENST00000543555 COL22A1Q8NFW1 1626 aaPredicted RBP16.71■□□□□ 0.27
MSH2-206ENST00000543555 CREB3L3Q68CJ9 461 aa16.71■□□□□ 0.27
MSH2-206ENST00000543555 FAM43AQ8N2R8 423 aa16.71■□□□□ 0.27
MSH2-206ENST00000543555 GPT2Q8TD30 523 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms