RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 PI4KAP1Q8N8J0 262 aa28.08■■■□□ 2.09
SHD-201ENST00000543264 DDX19AQ9NUU7 478 aaKnown RBP28.08■■■□□ 2.09
SHD-201ENST00000543264 TECPR2O15040 1411 aa28.08■■■□□ 2.09
SHD-201ENST00000543264 SYCP1Q15431 976 aa28.08■■■□□ 2.09
SHD-201ENST00000543264 PAXBP1Q9Y5B6 917 aa28.08■■■□□ 2.09
SHD-201ENST00000543264 NR1I2O75469 434 aa28.07■■■□□ 2.08
SHD-201ENST00000543264 LARP1Q6PKG0 1096 aaKnown RBP28.07■■■□□ 2.08
SHD-201ENST00000543264 TDRD7Q8NHU6 1098 aaKnown RBP28.07■■■□□ 2.08
SHD-201ENST00000543264 LEO1Q8WVC0 666 aaPredicted RBP28.07■■■□□ 2.08
SHD-201ENST00000543264 CLSTN2Q9H4D0 955 aa28.07■■■□□ 2.08
SHD-201ENST00000543264 IFIT2P09913 472 aaKnown RBP28.07■■■□□ 2.08
SHD-201ENST00000543264 BEND3Q5T5X7 828 aa28.07■■■□□ 2.08
SHD-201ENST00000543264 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.07■■■□□ 2.08
SHD-201ENST00000543264 FAM227BQ96M60 508 aa28.07■■■□□ 2.08
SHD-201ENST00000543264 BICD2Q8TD16 824 aa28.06■■■□□ 2.08
SHD-201ENST00000543264 DNAAF4Q8WXU2 420 aa28.06■■■□□ 2.08
SHD-201ENST00000543264 NPHP3Q7Z494 1330 aa28.06■■■□□ 2.08
SHD-201ENST00000543264 STK3Q13188 491 aa28.06■■■□□ 2.08
SHD-201ENST00000543264 CCDC144BQ3MJ40 725 aa28.06■■■□□ 2.08
SHD-201ENST00000543264 CCDC144CPQ8IYA2 1237 aa28.06■■■□□ 2.08
SHD-201ENST00000543264 CGNQ9P2M7 1197 aaKnown RBP28.06■■■□□ 2.08
SHD-201ENST00000543264 NALCNQ8IZF0 1738 aa28.05■■■□□ 2.08
SHD-201ENST00000543264 PSMA5P28066 241 aa28.05■■■□□ 2.08
SHD-201ENST00000543264 GPATCH3Q96I76 525 aa28.05■■■□□ 2.08
SHD-201ENST00000543264 SLC27A2O14975 620 aa28.05■■■□□ 2.08
SHD-201ENST00000543264 ANXA1P04083 346 aa28.05■■■□□ 2.08
SHD-201ENST00000543264 PDIA4P13667 645 aaKnown RBP28.05■■■□□ 2.08
SHD-201ENST00000543264 EVI5LQ96CN4 794 aa28.05■■■□□ 2.08
SHD-201ENST00000543264 LTV1Q96GA3 475 aaPredicted RBP28.05■■■□□ 2.08
SHD-201ENST00000543264 PA2G4Q9UQ80 394 aaKnown RBP28.05■■■□□ 2.08
SHD-201ENST00000543264 MAP4K1Q92918 833 aa28.04■■■□□ 2.08
SHD-201ENST00000543264 CHPF2Q9P2E5 772 aa28.04■■■□□ 2.08
SHD-201ENST00000543264 NMIQ13287 307 aaPredicted RBP28.04■■■□□ 2.08
SHD-201ENST00000543264 BLOC1S2Q6QNY1 142 aa28.04■■■□□ 2.08
SHD-201ENST00000543264 RBM43Q6ZSC3 357 aaKnown RBP28.04■■■□□ 2.08
SHD-201ENST00000543264 HDGFP51858 240 aaKnown RBP28.03■■■□□ 2.08
SHD-201ENST00000543264 CEP135Q66GS9 1140 aa28.03■■■□□ 2.08
SHD-201ENST00000543264 PGBD1Q96JS3 809 aa28.03■■■□□ 2.08
SHD-201ENST00000543264 N4BP2Q86UW6 1770 aaPredicted RBP28.03■■■□□ 2.08
SHD-201ENST00000543264 FMN2Q9NZ56 1722 aa28.03■■■□□ 2.08
SHD-201ENST00000543264 DDX41Q9UJV9 622 aaKnown RBP28.03■■■□□ 2.08
SHD-201ENST00000543264 AACSQ86V21 672 aa28.02■■■□□ 2.08
SHD-201ENST00000543264 BABAM1Q9NWV8 329 aa28.01■■■□□ 2.07
SHD-201ENST00000543264 TAF6LQ9Y6J9 622 aa28.01■■■□□ 2.07
SHD-201ENST00000543264 ARID5BQ14865 1188 aa28■■■□□ 2.07
SHD-201ENST00000543264 ANKRD1Q15327 319 aa28■■■□□ 2.07
SHD-201ENST00000543264 NGDNQ8NEJ9 315 aaKnown RBP28■■■□□ 2.07
SHD-201ENST00000543264 CRYBG1Q9Y4K1 1723 aa27.99■■■□□ 2.07
SHD-201ENST00000543264 LRRC37A3O60309 1634 aa27.99■■■□□ 2.07
SHD-201ENST00000543264 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.99■■■□□ 2.07
SHD-201ENST00000543264 GOLGA6L19H0YKK7 550 aa27.99■■■□□ 2.07
SHD-201ENST00000543264 LRRC8AQ8IWT6 810 aa27.99■■■□□ 2.07
SHD-201ENST00000543264 USP27XA6NNY8 438 aa27.98■■■□□ 2.07
SHD-201ENST00000543264 RPS6KB1P23443 525 aa27.98■■■□□ 2.07
SHD-201ENST00000543264 TOB2Q14106 344 aaPredicted RBP27.98■■■□□ 2.07
SHD-201ENST00000543264 NUTM2GQ5VZR2 741 aa27.98■■■□□ 2.07
SHD-201ENST00000543264 KIF18AQ8NI77 898 aa27.98■■■□□ 2.07
SHD-201ENST00000543264 C9orf78Q9NZ63 289 aaPredicted RBP27.98■■■□□ 2.07
SHD-201ENST00000543264 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.98■■■□□ 2.07
SHD-201ENST00000543264 USHBP1Q8N6Y0 703 aa27.97■■■□□ 2.07
SHD-201ENST00000543264 DDX11Q96FC9 970 aa27.97■■■□□ 2.07
SHD-201ENST00000543264 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.97■■■□□ 2.07
SHD-201ENST00000543264 V9GYY5 206 aaPredicted RBP27.97■■■□□ 2.07
SHD-201ENST00000543264 GABPB1Q06547 395 aaPredicted RBP27.97■■■□□ 2.07
SHD-201ENST00000543264 RNF20Q5VTR2 975 aa27.97■■■□□ 2.07
SHD-201ENST00000543264 MORC2Q9Y6X9 1032 aaPredicted RBP27.97■■■□□ 2.07
SHD-201ENST00000543264 NLRP6P59044 892 aa27.96■■■□□ 2.07
SHD-201ENST00000543264 CCDC8Q9H0W5 538 aaPredicted RBP27.96■■■□□ 2.07
SHD-201ENST00000543264 A0A0D9SFI3 127 aa27.96■■■□□ 2.07
SHD-201ENST00000543264 JAK2O60674 1132 aa27.96■■■□□ 2.07
SHD-201ENST00000543264 EIF4A1P60842 406 aaKnown RBP27.95■■■□□ 2.07
SHD-201ENST00000543264 CEBPZQ03701 1054 aaKnown RBP27.95■■■□□ 2.07
SHD-201ENST00000543264 CDC25BP30305 580 aa27.95■■■□□ 2.06
SHD-201ENST00000543264 HOXC9P31274 260 aa27.95■■■□□ 2.06
SHD-201ENST00000543264 PTPN14Q15678 1187 aa27.95■■■□□ 2.06
SHD-201ENST00000543264 ZNF215Q9UL58 517 aaPredicted RBP27.95■■■□□ 2.06
SHD-201ENST00000543264 HIP1O00291 1037 aa27.94■■■□□ 2.06
SHD-201ENST00000543264 FAM69CQ0P6D2 419 aa27.94■■■□□ 2.06
SHD-201ENST00000543264 ERC1Q8IUD2 1116 aa27.94■■■□□ 2.06
SHD-201ENST00000543264 KCNQ3O43525 872 aa27.94■■■□□ 2.06
SHD-201ENST00000543264 SLFN14P0C7P3 912 aa27.94■■■□□ 2.06
SHD-201ENST00000543264 MTX1Q13505 466 aa27.94■■■□□ 2.06
SHD-201ENST00000543264 IQCB1Q15051 598 aa27.94■■■□□ 2.06
SHD-201ENST00000543264 C11orf57Q6ZUT1 292 aaPredicted RBP27.94■■■□□ 2.06
SHD-201ENST00000543264 BOLA2Q9H3K6 86 aa27.94■■■□□ 2.06
SHD-201ENST00000543264 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.94■■■□□ 2.06
SHD-201ENST00000543264 SKILP12757 684 aa27.93■■■□□ 2.06
SHD-201ENST00000543264 FSD1Q9BTV5 496 aa27.93■■■□□ 2.06
SHD-201ENST00000543264 TRMT1Q9NXH9 659 aaKnown RBP27.93■■■□□ 2.06
SHD-201ENST00000543264 TOPAZ1Q8N9V7 1692 aa27.92■■■□□ 2.06
SHD-201ENST00000543264 KMT5BQ4FZB7 885 aa27.92■■■□□ 2.06
SHD-201ENST00000543264 FILIP1Q7Z7B0 1213 aa27.92■■■□□ 2.06
SHD-201ENST00000543264 BRF1Q92994 677 aa27.92■■■□□ 2.06
SHD-201ENST00000543264 EAF2Q96CJ1 260 aaPredicted RBP27.92■■■□□ 2.06
SHD-201ENST00000543264 LGR6Q9HBX8 967 aa27.92■■■□□ 2.06
SHD-201ENST00000543264 H3BQV1 296 aa27.92■■■□□ 2.06
SHD-201ENST00000543264 IFFO2Q5TF58 517 aa27.92■■■□□ 2.06
SHD-201ENST00000543264 USP16Q9Y5T5 823 aa27.92■■■□□ 2.06
SHD-201ENST00000543264 CAVIN2O95810 425 aa27.91■■■□□ 2.06
SHD-201ENST00000543264 ADCY9O60503 1353 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms