RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 KIAA0232Q92628 1395 aa13.37□□□□□ -0.27
CDH4-201ENST00000543233 ZNF530Q6P9A1 599 aaPredicted RBP13.37□□□□□ -0.27
CDH4-201ENST00000543233 KIF2CQ99661 725 aa13.37□□□□□ -0.27
CDH4-201ENST00000543233 KNDC1Q76NI1 1749 aa13.36□□□□□ -0.27
CDH4-201ENST00000543233 MAP4K4O95819 1239 aaPredicted RBP13.36□□□□□ -0.27
CDH4-201ENST00000543233 TEFQ10587 303 aa13.36□□□□□ -0.27
CDH4-201ENST00000543233 PLCD4Q9BRC7 762 aa13.36□□□□□ -0.27
CDH4-201ENST00000543233 SMTNL1A8MU46 457 aa13.36□□□□□ -0.27
CDH4-201ENST00000543233 CCT4P50991 539 aaKnown RBP13.36□□□□□ -0.27
CDH4-201ENST00000543233 TTC31Q49AM3 519 aaPredicted RBP13.36□□□□□ -0.27
CDH4-201ENST00000543233 IRF6O14896 467 aa13.35□□□□□ -0.27
CDH4-201ENST00000543233 MBD3O95983 291 aa13.35□□□□□ -0.27
CDH4-201ENST00000543233 RNF217Q8TC41 542 aa13.35□□□□□ -0.27
CDH4-201ENST00000543233 ATP10DQ9P241 1426 aa13.35□□□□□ -0.27
CDH4-201ENST00000543233 CXorf56Q9H5V9 222 aa13.35□□□□□ -0.27
CDH4-201ENST00000543233 ZNF446Q9NWS9 450 aa13.35□□□□□ -0.27
CDH4-201ENST00000543233 SUFUQ9UMX1 484 aa13.35□□□□□ -0.27
CDH4-201ENST00000543233 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.35□□□□□ -0.27
CDH4-201ENST00000543233 REC8O95072 547 aa13.35□□□□□ -0.27
CDH4-201ENST00000543233 HCLS1P14317 486 aaPredicted RBP13.35□□□□□ -0.27
CDH4-201ENST00000543233 CLEC17AQ6ZS10 378 aa13.35□□□□□ -0.27
CDH4-201ENST00000543233 CWC15Q9P013 229 aaKnown RBP13.35□□□□□ -0.27
CDH4-201ENST00000543233 SEMA3FQ13275 785 aa13.34□□□□□ -0.27
CDH4-201ENST00000543233 TXLNBQ8N3L3 684 aa13.34□□□□□ -0.27
CDH4-201ENST00000543233 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.34□□□□□ -0.27
CDH4-201ENST00000543233 CHPF2Q9P2E5 772 aa13.34□□□□□ -0.27
CDH4-201ENST00000543233 MAP3K5Q99683 1374 aa13.34□□□□□ -0.27
CDH4-201ENST00000543233 OS9Q13438 667 aaPredicted RBP13.34□□□□□ -0.27
CDH4-201ENST00000543233 ELF2Q15723 593 aa13.34□□□□□ -0.27
CDH4-201ENST00000543233 FBXO38Q6PIJ6 1188 aa13.34□□□□□ -0.27
CDH4-201ENST00000543233 CREBRFQ8IUR6 639 aa13.34□□□□□ -0.27
CDH4-201ENST00000543233 KDRP35968 1356 aa13.34□□□□□ -0.27
CDH4-201ENST00000543233 A0A1B0GUL7 405 aa13.33□□□□□ -0.27
CDH4-201ENST00000543233 PROSER2Q86WR7 435 aaPredicted RBP13.33□□□□□ -0.27
CDH4-201ENST00000543233 NUTM1Q86Y26 1132 aa13.33□□□□□ -0.27
CDH4-201ENST00000543233 UBTFL1P0CB47 393 aaPredicted RBP13.33□□□□□ -0.28
CDH4-201ENST00000543233 NOM1Q5C9Z4 860 aaKnown RBP13.33□□□□□ -0.28
CDH4-201ENST00000543233 ARHGAP23Q9P227 1491 aa13.33□□□□□ -0.28
CDH4-201ENST00000543233 PRAMEF22A3QJZ6 481 aa13.33□□□□□ -0.28
CDH4-201ENST00000543233 ZSCAN26Q16670 478 aa13.33□□□□□ -0.28
CDH4-201ENST00000543233 CCDC91Q7Z6B0 441 aa13.33□□□□□ -0.28
CDH4-201ENST00000543233 DRC7Q8IY82 874 aa13.33□□□□□ -0.28
CDH4-201ENST00000543233 IP6K1Q92551 441 aa13.33□□□□□ -0.28
CDH4-201ENST00000543233 GCP02774 474 aa13.32□□□□□ -0.28
CDH4-201ENST00000543233 AIMP1Q12904 312 aaKnown RBP13.32□□□□□ -0.28
CDH4-201ENST00000543233 TPD52L1Q16890 204 aaPredicted RBP13.32□□□□□ -0.28
CDH4-201ENST00000543233 CASC1Q6TDU7 716 aa13.32□□□□□ -0.28
CDH4-201ENST00000543233 PI4KAP2A4QPH2 592 aa13.32□□□□□ -0.28
CDH4-201ENST00000543233 BTBD11A6QL63 1104 aa13.32□□□□□ -0.28
CDH4-201ENST00000543233 KCNA4P22459 653 aa13.32□□□□□ -0.28
CDH4-201ENST00000543233 PDE1AP54750 535 aa13.32□□□□□ -0.28
CDH4-201ENST00000543233 RBM6P78332 1123 aaKnown RBP13.32□□□□□ -0.28
CDH4-201ENST00000543233 PPP2R5AQ15172 486 aa13.32□□□□□ -0.28
CDH4-201ENST00000543233 SYCP1Q15431 976 aa13.32□□□□□ -0.28
CDH4-201ENST00000543233 PI4KAP1Q8N8J0 262 aa13.32□□□□□ -0.28
CDH4-201ENST00000543233 KCNF1Q9H3M0 494 aa13.32□□□□□ -0.28
CDH4-201ENST00000543233 DONSONQ9NYP3 566 aa13.32□□□□□ -0.28
CDH4-201ENST00000543233 SURF6O75683 361 aaKnown RBP13.31□□□□□ -0.28
CDH4-201ENST00000543233 GPS2Q13227 327 aa13.31□□□□□ -0.28
CDH4-201ENST00000543233 CABLES1Q8TDN4 633 aa13.31□□□□□ -0.28
CDH4-201ENST00000543233 LRRCC1Q9C099 1032 aa13.31□□□□□ -0.28
CDH4-201ENST00000543233 ZBTB12Q9Y330 459 aaPredicted RBP13.31□□□□□ -0.28
CDH4-201ENST00000543233 SLIT1O75093 1534 aa13.31□□□□□ -0.28
CDH4-201ENST00000543233 GNAI3P08754 354 aa13.31□□□□□ -0.28
CDH4-201ENST00000543233 ZGPATQ8N5A5 531 aaKnown RBP13.31□□□□□ -0.28
CDH4-201ENST00000543233 USP44Q9H0E7 712 aa13.31□□□□□ -0.28
CDH4-201ENST00000543233 RRP15Q9Y3B9 282 aaKnown RBP13.31□□□□□ -0.28
CDH4-201ENST00000543233 NRKQ7Z2Y5 1582 aa13.31□□□□□ -0.28
CDH4-201ENST00000543233 HTATSF1O43719 755 aaKnown RBP13.3□□□□□ -0.28
CDH4-201ENST00000543233 NBPF7P0C2Y1 421 aaPredicted RBP13.3□□□□□ -0.28
CDH4-201ENST00000543233 MCCP23508 829 aa13.3□□□□□ -0.28
CDH4-201ENST00000543233 BMS1Q14692 1282 aaKnown RBP13.3□□□□□ -0.28
CDH4-201ENST00000543233 GDPD2Q9HCC8 539 aa13.3□□□□□ -0.28
CDH4-201ENST00000543233 MAP2K1Q02750 393 aaPredicted RBP13.3□□□□□ -0.28
CDH4-201ENST00000543233 C1orf141Q5JVX7 400 aa13.3□□□□□ -0.28
CDH4-201ENST00000543233 TTLL5Q6EMB2 1281 aa13.3□□□□□ -0.28
CDH4-201ENST00000543233 TICAM2Q86XR7 235 aa13.3□□□□□ -0.28
CDH4-201ENST00000543233 FAM184AQ8NB25 1140 aa13.3□□□□□ -0.28
CDH4-201ENST00000543233 ZNF215Q9UL58 517 aaPredicted RBP13.3□□□□□ -0.28
CDH4-201ENST00000543233 AXIN2Q9Y2T1 843 aa13.3□□□□□ -0.28
CDH4-201ENST00000543233 NFATC2IPQ8NCF5 419 aa13.3□□□□□ -0.28
CDH4-201ENST00000543233 ANKRD24Q8TF21 1146 aa13.3□□□□□ -0.28
CDH4-201ENST00000543233 USP26Q9BXU7 913 aa13.3□□□□□ -0.28
CDH4-201ENST00000543233 ANO2Q9NQ90 1003 aa13.3□□□□□ -0.28
CDH4-201ENST00000543233 SRGAP3O43295 1099 aa13.29□□□□□ -0.28
CDH4-201ENST00000543233 PTGS1P23219 599 aa13.29□□□□□ -0.28
CDH4-201ENST00000543233 PIP4K2AP48426 406 aaPredicted RBP13.29□□□□□ -0.28
CDH4-201ENST00000543233 LRCH2Q5VUJ6 765 aa13.29□□□□□ -0.28
CDH4-201ENST00000543233 PPP1R42Q7Z4L9 355 aa13.29□□□□□ -0.28
CDH4-201ENST00000543233 NLRP2Q9NX02 1062 aa13.29□□□□□ -0.28
CDH4-201ENST00000543233 PIK3C2AO00443 1686 aa13.29□□□□□ -0.28
CDH4-201ENST00000543233 ADAMTSL3P82987 1691 aa13.29□□□□□ -0.28
CDH4-201ENST00000543233 SLC39A6Q13433 755 aa13.29□□□□□ -0.28
CDH4-201ENST00000543233 CEP120Q8N960 986 aa13.29□□□□□ -0.28
CDH4-201ENST00000543233 SGSM3Q96HU1 749 aa13.29□□□□□ -0.28
CDH4-201ENST00000543233 SRCIN1Q9C0H9 1055 aa13.29□□□□□ -0.28
CDH4-201ENST00000543233 TOPAZ1Q8N9V7 1692 aa13.29□□□□□ -0.28
CDH4-201ENST00000543233 ATP2B1P20020 1258 aa13.28□□□□□ -0.28
CDH4-201ENST00000543233 MX1P20591 662 aa13.28□□□□□ -0.28
CDH4-201ENST00000543233 UNC5CLQ8IV45 518 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms