RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 CHRNA2Q15822 529 aa22.4■■□□□ 1.18
COPS7A-215ENST00000543155 VPS53Q5VIR6 699 aa22.4■■□□□ 1.18
COPS7A-215ENST00000543155 LRSAM1Q6UWE0 723 aa22.4■■□□□ 1.18
COPS7A-215ENST00000543155 SNRKQ9NRH2 765 aa22.4■■□□□ 1.18
COPS7A-215ENST00000543155 TLR7Q9NYK1 1049 aaKnown RBP22.4■■□□□ 1.18
COPS7A-215ENST00000543155 NSFL1CQ9UNZ2 370 aaKnown RBP22.4■■□□□ 1.18
COPS7A-215ENST00000543155 SPATA31A3Q5VYP0 1347 aa22.4■■□□□ 1.18
COPS7A-215ENST00000543155 JAKMIP1Q96N16 626 aaKnown RBP22.39■■□□□ 1.18
COPS7A-215ENST00000543155 USP16Q9Y5T5 823 aa22.39■■□□□ 1.18
COPS7A-215ENST00000543155 PRIM1P49642 420 aaKnown RBP22.39■■□□□ 1.17
COPS7A-215ENST00000543155 NMIQ13287 307 aaPredicted RBP22.39■■□□□ 1.17
COPS7A-215ENST00000543155 NECTIN1Q15223 517 aa22.39■■□□□ 1.17
COPS7A-215ENST00000543155 EPHA10Q5JZY3 1008 aa22.39■■□□□ 1.17
COPS7A-215ENST00000543155 ZSWIM6Q9HCJ5 1215 aa22.39■■□□□ 1.17
COPS7A-215ENST00000543155 RBSNQ9H1K0 784 aa22.38■■□□□ 1.17
COPS7A-215ENST00000543155 COPRSQ9NQ92 184 aa22.38■■□□□ 1.17
COPS7A-215ENST00000543155 PDRG1Q9NUG6 133 aa22.38■■□□□ 1.17
COPS7A-215ENST00000543155 CYP46A1Q9Y6A2 500 aa22.38■■□□□ 1.17
COPS7A-215ENST00000543155 ZKSCAN1P17029 563 aaPredicted RBP22.37■■□□□ 1.17
COPS7A-215ENST00000543155 CABP4P57796 275 aa22.37■■□□□ 1.17
COPS7A-215ENST00000543155 KLHDC4Q8TBB5 520 aa22.37■■□□□ 1.17
COPS7A-215ENST00000543155 SYAP1Q96A49 352 aaPredicted RBP22.37■■□□□ 1.17
COPS7A-215ENST00000543155 ZSCAN31Q96LW9 406 aaPredicted RBP22.37■■□□□ 1.17
COPS7A-215ENST00000543155 FAM227BQ96M60 508 aa22.37■■□□□ 1.17
COPS7A-215ENST00000543155 SMC3Q9UQE7 1217 aa22.37■■□□□ 1.17
COPS7A-215ENST00000543155 RBM8AQ9Y5S9 174 aaKnown RBP22.37■■□□□ 1.17
COPS7A-215ENST00000543155 CPA1P15085 419 aa22.36■■□□□ 1.17
COPS7A-215ENST00000543155 ADCK5Q3MIX3 580 aa22.36■■□□□ 1.17
COPS7A-215ENST00000543155 MAP4K1Q92918 833 aa22.36■■□□□ 1.17
COPS7A-215ENST00000543155 FSD1Q9BTV5 496 aa22.36■■□□□ 1.17
COPS7A-215ENST00000543155 SH2B1Q9NRF2 756 aaPredicted RBP22.36■■□□□ 1.17
COPS7A-215ENST00000543155 ERBB4Q15303 1308 aa22.36■■□□□ 1.17
COPS7A-215ENST00000543155 SYCE3A1L190 88 aa22.36■■□□□ 1.17
COPS7A-215ENST00000543155 ZSCAN22P10073 491 aaPredicted RBP22.36■■□□□ 1.17
COPS7A-215ENST00000543155 BOLA2Q9H3K6 86 aa22.36■■□□□ 1.17
COPS7A-215ENST00000543155 CREB3L3Q68CJ9 461 aa22.35■■□□□ 1.17
COPS7A-215ENST00000543155 TMEM87AQ8NBN3 555 aa22.35■■□□□ 1.17
COPS7A-215ENST00000543155 MED23Q9ULK4 1368 aa22.35■■□□□ 1.17
COPS7A-215ENST00000543155 STX6O43752 255 aa22.34■■□□□ 1.17
COPS7A-215ENST00000543155 KCNJ4P48050 445 aa22.34■■□□□ 1.17
COPS7A-215ENST00000543155 RFX5P48382 616 aaPredicted RBP22.34■■□□□ 1.17
COPS7A-215ENST00000543155 RABL6Q3YEC7 729 aaPredicted RBP22.34■■□□□ 1.17
COPS7A-215ENST00000543155 UBR2Q8IWV8 1755 aa22.34■■□□□ 1.17
COPS7A-215ENST00000543155 LARGE1O95461 756 aa22.34■■□□□ 1.17
COPS7A-215ENST00000543155 PIP4K2AP48426 406 aaPredicted RBP22.34■■□□□ 1.17
COPS7A-215ENST00000543155 LARP6Q9BRS8 491 aaKnown RBP22.34■■□□□ 1.17
COPS7A-215ENST00000543155 ANO8Q9HCE9 1232 aaPredicted RBP22.34■■□□□ 1.17
COPS7A-215ENST00000543155 XIRP1Q702N8 1843 aaKnown RBP22.33■■□□□ 1.17
COPS7A-215ENST00000543155 JCADQ9P266 1359 aa22.33■■□□□ 1.17
COPS7A-215ENST00000543155 A0A0D9SFI3 127 aa22.33■■□□□ 1.17
COPS7A-215ENST00000543155 SYT1P21579 422 aa22.33■■□□□ 1.17
COPS7A-215ENST00000543155 USP48Q86UV5 1035 aa22.33■■□□□ 1.17
COPS7A-215ENST00000543155 PLBD2Q8NHP8 589 aa22.33■■□□□ 1.17
COPS7A-215ENST00000543155 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.33■■□□□ 1.17
COPS7A-215ENST00000543155 NUP188Q5SRE5 1749 aa22.33■■□□□ 1.17
COPS7A-215ENST00000543155 PSMA5P28066 241 aa22.33■■□□□ 1.16
COPS7A-215ENST00000543155 UBE3BQ7Z3V4 1068 aa22.33■■□□□ 1.16
COPS7A-215ENST00000543155 TCHHQ07283 1943 aa22.32■■□□□ 1.16
COPS7A-215ENST00000543155 SLC27A2O14975 620 aa22.32■■□□□ 1.16
COPS7A-215ENST00000543155 PTPN12Q05209 780 aaKnown RBP22.32■■□□□ 1.16
COPS7A-215ENST00000543155 FOXD4L6Q3SYB3 417 aaPredicted RBP22.32■■□□□ 1.16
COPS7A-215ENST00000543155 FOXD4L3Q6VB84 417 aaPredicted RBP22.32■■□□□ 1.16
COPS7A-215ENST00000543155 PAPPAQ13219 1627 aa22.32■■□□□ 1.16
COPS7A-215ENST00000543155 TNNI3KQ59H18 835 aa22.31■■□□□ 1.16
COPS7A-215ENST00000543155 RNF20Q5VTR2 975 aa22.31■■□□□ 1.16
COPS7A-215ENST00000543155 CCDC83Q8IWF9 413 aa22.31■■□□□ 1.16
COPS7A-215ENST00000543155 ATP6V1DQ9Y5K8 247 aa22.31■■□□□ 1.16
COPS7A-215ENST00000543155 FPGT-TNNI3KV9GXZ4 949 aa22.31■■□□□ 1.16
COPS7A-215ENST00000543155 RFX7Q2KHR2 1363 aa22.31■■□□□ 1.16
COPS7A-215ENST00000543155 PHF14O94880 888 aa22.31■■□□□ 1.16
COPS7A-215ENST00000543155 F13A1P00488 732 aa22.31■■□□□ 1.16
COPS7A-215ENST00000543155 ATP5JP18859 108 aa22.31■■□□□ 1.16
COPS7A-215ENST00000543155 GDPD2Q9HCC8 539 aa22.31■■□□□ 1.16
COPS7A-215ENST00000543155 A0A087WZG4 1122 aa22.3■■□□□ 1.16
COPS7A-215ENST00000543155 GADD45BO75293 160 aaPredicted RBP22.3■■□□□ 1.16
COPS7A-215ENST00000543155 PCDH11XQ9BZA7 1347 aa22.3■■□□□ 1.16
COPS7A-215ENST00000543155 PCDH11YQ9BZA8 1340 aa22.3■■□□□ 1.16
COPS7A-215ENST00000543155 GJB2P29033 226 aa22.3■■□□□ 1.16
COPS7A-215ENST00000543155 TFCP2Q12800 502 aa22.3■■□□□ 1.16
COPS7A-215ENST00000543155 JARID2Q92833 1246 aaPredicted RBP22.3■■□□□ 1.16
COPS7A-215ENST00000543155 DBNLQ9UJU6 430 aaKnown RBP22.3■■□□□ 1.16
COPS7A-215ENST00000543155 ATP5J2-PTCD1G3V325 749 aa22.29■■□□□ 1.16
COPS7A-215ENST00000543155 PTCD1O75127 700 aaKnown RBP22.29■■□□□ 1.16
COPS7A-215ENST00000543155 CASP7P55210 303 aa22.29■■□□□ 1.16
COPS7A-215ENST00000543155 PDLIM2Q96JY6 352 aa22.29■■□□□ 1.16
COPS7A-215ENST00000543155 TJP1Q07157 1748 aa22.29■■□□□ 1.16
COPS7A-215ENST00000543155 CNPY2Q9Y2B0 182 aa22.28■■□□□ 1.16
COPS7A-215ENST00000543155 WDR17Q8IZU2 1322 aa22.28■■□□□ 1.16
COPS7A-215ENST00000543155 HS1BP3Q53T59 392 aa22.28■■□□□ 1.16
COPS7A-215ENST00000543155 TSPY26PQ9H489 355 aa22.28■■□□□ 1.16
COPS7A-215ENST00000543155 HMG20BQ9P0W2 317 aa22.28■■□□□ 1.16
COPS7A-215ENST00000543155 ME3Q16798 604 aa22.27■■□□□ 1.16
COPS7A-215ENST00000543155 KCPQ6ZWJ8 1503 aa22.27■■□□□ 1.16
COPS7A-215ENST00000543155 ST3GAL1Q11201 340 aa22.27■■□□□ 1.15
COPS7A-215ENST00000543155 ANKRD1Q15327 319 aa22.27■■□□□ 1.15
COPS7A-215ENST00000543155 ZSCAN30Q86W11 494 aa22.27■■□□□ 1.15
COPS7A-215ENST00000543155 ALDH8A1Q9H2A2 487 aaPredicted RBP22.27■■□□□ 1.15
COPS7A-215ENST00000543155 BLOC1S2Q6QNY1 142 aa22.26■■□□□ 1.15
COPS7A-215ENST00000543155 ZCRB1Q8TBF4 217 aaKnown RBP22.26■■□□□ 1.15
COPS7A-215ENST00000543155 ZNF589Q86UQ0 364 aaPredicted RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms